Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:54 (28467): wrapper (7.7.26015): starting
10:04:54 (28467): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:04:54] Arguments: --nthreads 8
[2025-06-04 10:04:54] Threads: 8
[2025-06-04 10:04:54] Checking for CVMFS
[2025-06-04 10:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:04:54] 2.11.2.0 4905 2867 73312 146781 2 187 16419878 18432001 3665 130560 0 8986698 99.998 645478 43758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:04:54] CVMFS is ok
[2025-06-04 10:04:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:04:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:04:54] Further information can be found at the LHC@home message board.
[2025-06-04 10:04:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:04:54] Checking for apptainer binary...
[2025-06-04 10:04:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:04:54] Running /usr/bin/apptainer --version
[2025-06-04 10:04:54] apptainer version 1.3.2-1.el7
[2025-06-04 10:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:04:55] c-211-32.aglt2.org
[2025-06-04 10:04:55] apptainer works
[2025-06-04 10:04:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:04:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:04:55] Starting ATLAS job with PandaID=6678313242
[2025-06-04 10:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:47:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:47:27] 2025-06-04 15:47:11,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:47:27] 2025-06-04 15:47:11,462 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:47:27] 2025-06-04 15:47:11,462 | INFO     | job 6678313242 has finished - writing final server update
[2025-06-04 11:47:27] 2025-06-04 15:47:11,463 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:47:27] 2025-06-04 15:47:11,467 | INFO     | executing command: lscpu
[2025-06-04 11:47:27] 2025-06-04 15:47:11,521 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:47:27] 2025-06-04 15:47:13,087 | INFO     | monitor loop #460: job 0:6678313242 is in state 'finished'
[2025-06-04 11:47:27] 2025-06-04 15:47:13,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,461 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 11:47:27] 2025-06-04 15:47:14,462 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678313242/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,463 | INFO     | extracted standard info from prmon json
[2025-06-04 11:47:27] 2025-06-04 15:47:14,463 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:47:27] 2025-06-04 15:47:14,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:47:27] 2025-06-04 15:47:14,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:47:27] 2025-06-04 15:47:14,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:47:27] 2025-06-04 15:47:14,466 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:47:27] 2025-06-04 15:47:14,467 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,467 | INFO     | sum of deviations: 10821640583.999998
[2025-06-04 11:47:27] 2025-06-04 15:47:14,467 | INFO     | mean x: 1749048952.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,468 | INFO     | mean y: 2478980.68
[2025-06-04 11:47:27] 2025-06-04 15:47:14,468 | INFO     | -- intersect: -61043923841.09109
[2025-06-04 11:47:27] 2025-06-04 15:47:14,468 | INFO     | intersect: -61043923841.09109
[2025-06-04 11:47:27] 2025-06-04 15:47:14,468 | INFO     | chi2: 1.514416120837247
[2025-06-04 11:47:27] 2025-06-04 15:47:14,469 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,469 | INFO     | sum of deviations: 10141778382.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,469 | INFO     | mean x: 1749048800.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,469 | INFO     | mean y: 2476635.5894736843
[2025-06-04 11:47:27] 2025-06-04 15:47:14,470 | INFO     | -- intersect: -66726571071.693405
[2025-06-04 11:47:27] 2025-06-04 15:47:14,470 | INFO     | intersect: -66726571071.693405
[2025-06-04 11:47:27] 2025-06-04 15:47:14,470 | INFO     | chi2: 1.5180243495214003
[2025-06-04 11:47:27] 2025-06-04 15:47:14,470 | INFO     | current chi2=1.5180243495214003 (change=-0.23825873447242563 %)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,470 | INFO     | right removable region: 94
[2025-06-04 11:47:27] 2025-06-04 15:47:14,471 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,471 | INFO     | sum of deviations: -4829019982.000006
[2025-06-04 11:47:27] 2025-06-04 15:47:14,471 | INFO     | mean x: 1749049105.0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,471 | INFO     | mean y: 2531846.8736842107
[2025-06-04 11:47:27] 2025-06-04 15:47:14,472 | INFO     | -- intersect: 31775653760.27245
[2025-06-04 11:47:27] 2025-06-04 15:47:14,472 | INFO     | intersect: 31775653760.27245
[2025-06-04 11:47:27] 2025-06-04 15:47:14,472 | INFO     | chi2: 0.02450015648111696
[2025-06-04 11:47:27] 2025-06-04 15:47:14,472 | INFO     | current chi2=0.02450015648111696 (change=98.38220445860205 %)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,472 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,473 | INFO     | sum of deviations: -4303113392.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,473 | INFO     | mean x: 1749049257.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,473 | INFO     | mean y: 2529800.1
[2025-06-04 11:47:27] 2025-06-04 15:47:14,473 | INFO     | -- intersect: 33301630018.656147
[2025-06-04 11:47:27] 2025-06-04 15:47:14,473 | INFO     | intersect: 33301630018.656147
[2025-06-04 11:47:27] 2025-06-04 15:47:14,474 | INFO     | chi2: 0.024028284736919696
[2025-06-04 11:47:27] 2025-06-04 15:47:14,474 | INFO     | current chi2=0.024028284736919696 (change=1.92599481787372 %)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,474 | INFO     | left removable region: 20
[2025-06-04 11:47:27] 2025-06-04 15:47:14,474 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | sum of deviations: -2050121824.5000002
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | mean x: 1749049379.5
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | mean y: 2519031.2297297297
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | -- intersect: 28544720835.839767
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | intersect: 28544720835.839767
[2025-06-04 11:47:27] 2025-06-04 15:47:14,475 | INFO     | chi2: 0.019101209140414663
[2025-06-04 11:47:27] 2025-06-04 15:47:14,476 | INFO     | -- intersect: 28544720835.839767
[2025-06-04 11:47:27] 2025-06-04 15:47:14,476 | INFO     | current memory leak: -16.32 B/s (using 74 data points, chi2=0.02)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,476 | INFO     | ..............................
[2025-06-04 11:47:27] 2025-06-04 15:47:14,476 | INFO     | . Timing measurements:
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . get job = 0 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . initial setup = 2 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . payload setup = 6 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . stage-in = 0 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . payload execution = 6093 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . stage-out = 0 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | . log creation = 0 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,477 | INFO     | ..............................
[2025-06-04 11:47:27] 2025-06-04 15:47:14,560 | INFO     | 
[2025-06-04 11:47:27] 2025-06-04 15:47:14,561 | INFO     | job summary report
[2025-06-04 11:47:27] 2025-06-04 15:47:14,561 | INFO     | --------------------------------------------------
[2025-06-04 11:47:27] 2025-06-04 15:47:14,561 | INFO     | PanDA job id: 6678313242
[2025-06-04 11:47:27] 2025-06-04 15:47:14,562 | INFO     | task id: 45006595
[2025-06-04 11:47:27] 2025-06-04 15:47:14,562 | INFO     | errors: (none)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:47:27] 2025-06-04 15:47:14,562 | INFO     | pilot state: finished 
[2025-06-04 11:47:27] 2025-06-04 15:47:14,562 | INFO     | transexitcode: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,563 | INFO     | exeerrorcode: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,563 | INFO     | exeerrordiag: 
[2025-06-04 11:47:27] 2025-06-04 15:47:14,563 | INFO     | exitcode: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,563 | INFO     | exitmsg: OK
[2025-06-04 11:47:27] 2025-06-04 15:47:14,563 | INFO     | cpuconsumptiontime: 45851 s
[2025-06-04 11:47:27] 2025-06-04 15:47:14,564 | INFO     | nevents: 400
[2025-06-04 11:47:27] 2025-06-04 15:47:14,564 | INFO     | neventsw: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:14,564 | INFO     | pid: 39437
[2025-06-04 11:47:27] 2025-06-04 15:47:14,564 | INFO     | pgrp: 39437
[2025-06-04 11:47:27] 2025-06-04 15:47:14,565 | INFO     | corecount: 8
[2025-06-04 11:47:27] 2025-06-04 15:47:14,565 | INFO     | event service: False
[2025-06-04 11:47:27] 2025-06-04 15:47:14,565 | INFO     | sizes: {0: 2397342, 1: 2397342, 4: 2397576, 12: 2397604, 6104: 2424197, 6106: 2433138, 6109: 2433322, 6113: 2433492}
[2025-06-04 11:47:27] 2025-06-04 15:47:14,565 | INFO     | --------------------------------------------------
[2025-06-04 11:47:27] 2025-06-04 15:47:14,565 | INFO     | 
[2025-06-04 11:47:27] 2025-06-04 15:47:14,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 11:47:27] 2025-06-04 15:47:14,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:47:27] 2025-06-04 15:47:14,596 | INFO     | job 6678313242 has completed (purged errors)
[2025-06-04 11:47:27] 2025-06-04 15:47:14,596 | INFO     | overall cleanup function is called
[2025-06-04 11:47:27] 2025-06-04 15:47:15,604 | INFO     | --- collectZombieJob: --- 10, [39437]
[2025-06-04 11:47:27] 2025-06-04 15:47:15,604 | INFO     | zombie collector waiting for pid 39437
[2025-06-04 11:47:27] 2025-06-04 15:47:15,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:47:27] 2025-06-04 15:47:15,605 | INFO     | collected zombie processes
[2025-06-04 11:47:27] 2025-06-04 15:47:15,605 | INFO     | will attempt to kill all subprocesses of pid=39437
[2025-06-04 11:47:27] 2025-06-04 15:47:15,769 | INFO     | process IDs to be killed: [39437] (in reverse order)
[2025-06-04 11:47:27] 2025-06-04 15:47:15,838 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:47:27] 2025-06-04 15:47:15,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:47:27] 2025-06-04 15:47:15,844 | INFO     | did not find any defunct processes belonging to 39437
[2025-06-04 11:47:27] 2025-06-04 15:47:15,850 | INFO     | did not find any defunct processes belonging to 39437
[2025-06-04 11:47:27] 2025-06-04 15:47:15,850 | INFO     | ready for new job
[2025-06-04 11:47:27] 2025-06-04 15:47:15,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:47:27] 2025-06-04 15:47:15,852 | INFO     | **************************************
[2025-06-04 11:47:27] 2025-06-04 15:47:15,852 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:47:27] 2025-06-04 15:47:15,852 | INFO     | **************************************
[2025-06-04 11:47:27] 2025-06-04 15:47:15,853 | INFO     | 
[2025-06-04 11:47:27] 2025-06-04 15:47:15,855 | INFO     | architecture information:
[2025-06-04 11:47:27] 2025-06-04 15:47:15,856 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:47:27] 2025-06-04 15:47:15,872 | INFO     | cat /etc/os-release:
[2025-06-04 11:47:27] NAME="CentOS Linux"
[2025-06-04 11:47:27] VERSION="7 (Core)"
[2025-06-04 11:47:27] ID="centos"
[2025-06-04 11:47:27] ID_LIKE="rhel fedora"
[2025-06-04 11:47:27] VERSION_ID="7"
[2025-06-04 11:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:47:27] ANSI_COLOR="0;31"
[2025-06-04 11:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:47:27] HOME_URL="https://www.centos.org/"
[2025-06-04 11:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:47:27] 
[2025-06-04 11:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:47:27] 
[2025-06-04 11:47:27] 2025-06-04 15:47:15,872 | INFO     | **************************************
[2025-06-04 11:47:27] 2025-06-04 15:47:16,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 11:47:27] 2025-06-04 15:47:16,395 | INFO     | sufficient remaining disk space (57642319872 B)
[2025-06-04 11:47:27] 2025-06-04 15:47:16,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:47:27] 2025-06-04 15:47:16,396 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:47:27] 2025-06-04 15:47:16,396 | INFO     | update_server=False
[2025-06-04 11:47:27] 2025-06-04 15:47:16,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:47:27] 2025-06-04 15:47:16,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:47:27] 2025-06-04 15:47:16,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:47:27] 2025-06-04 15:47:16,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:47:27] 2025-06-04 15:47:16,596 | INFO     | aborting loop
[2025-06-04 11:47:27] 2025-06-04 15:47:16,699 | INFO     | all job control threads have been joined
[2025-06-04 11:47:27] 2025-06-04 15:47:16,786 | INFO     | all data control threads have been joined
[2025-06-04 11:47:27] 2025-06-04 15:47:17,197 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:47:27] 2025-06-04 15:47:17,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:47:27] 2025-06-04 15:47:17,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:47:27] 2025-06-04 15:47:17,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:47:27] 2025-06-04 15:47:17,402 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,404 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,436 | INFO     | all payload control threads have been joined
[2025-06-04 11:47:27] 2025-06-04 15:47:17,602 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,704 | INFO     | [job] control thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,747 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,791 | INFO     | [data] control thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,812 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:17,970 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:18,051 | INFO     | [job] validate thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:18,315 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:18,441 | INFO     | [payload] control thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:18,571 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:18,622 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:19,342 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:20,404 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:47:27] 2025-06-04 15:47:22,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316531730240)>', '<ExcThread(monitor, started 140316095010560)>']
[2025-06-04 11:47:27] 2025-06-04 15:47:22,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:47:27] 2025-06-04 15:47:22,224 | INFO     | [monitor] control thread has ended
[2025-06-04 11:47:27] 2025-06-04 15:47:27,099 | INFO     | all workflow threads have been joined
[2025-06-04 11:47:27] 2025-06-04 15:47:27,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:47:27] 2025-06-04 15:47:27,099 | INFO     | traces error code: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:27,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:47:27] 2025-06-04 15:47:27,213 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:47:27] 2025-06-04 15:47:27,216 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:47:27] 2025-06-04 15:47:27,220 [wrapper] pilotpid: 32341
[2025-06-04 11:47:27] 2025-06-04 15:47:27,224 [wrapper] Pilot exit status: 0
[2025-06-04 11:47:27] 2025-06-04 15:47:27,236 [wrapper] pandaids: 6678313242
[2025-06-04 11:47:27] 2025-06-04 15:47:27,282 [wrapper] cleanup supervisor_pilot 26104 32342
[2025-06-04 11:47:27] 2025-06-04 15:47:27,287 [wrapper] Test setup, not cleaning
[2025-06-04 11:47:27] 2025-06-04 15:47:27,291 [wrapper] apfmon messages muted
[2025-06-04 11:47:27] 2025-06-04 15:47:27,294 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:47:27] 2025-06-04 15:47:27,298 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:47:27]  *** Error codes and diagnostics ***
[2025-06-04 11:47:27]     "exeErrorCode": 0,
[2025-06-04 11:47:27]     "exeErrorDiag": "",
[2025-06-04 11:47:27]     "pilotErrorCode": 0,
[2025-06-04 11:47:27]     "pilotErrorDiag": "",
[2025-06-04 11:47:27]  *** Listing of results directory ***
[2025-06-04 11:47:27] total 388156
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:16 queuedata.json
[2025-06-04 11:47:27] -rwx------ 1 boincer umatlas     37140 Jun  4 00:17 runpilot2-wrapper.sh
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:47:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:04 run_atlas
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:04 job.xml
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas 215803542 Jun  4 10:04 EVNT.45006593._002096.pool.root.1
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:47:27] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:04 shared
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:04 input.tar.gz
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:04 boinc_lockfile
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 10:04 pandaJob.out
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas    986819 Jun  4 10:05 agis_schedconf.cvmfs.json
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas   1598969 Jun  4 10:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:47:27] drwx------ 4 boincer umatlas      4096 Jun  4 10:05 pilot3
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas        95 Jun  4 11:46 pilot_heartbeat.json
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas 176029887 Jun  4 11:46 HITS.45006595._052336.pool.root.1
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:46 boinc_task_state.xml
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas      6033 Jun  4 11:46 init_data.xml
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas      1042 Jun  4 11:47 memory_monitor_summary.json
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas    316654 Jun  4 11:47 log.45006595._052336.job.log.tgz.1
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas      7732 Jun  4 11:47 heartbeat.json
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:47 boinc_mmap_file
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:47 wrapper_checkpoint.txt
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas      4353 Jun  4 11:47 pilotlog.txt
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas    589809 Jun  4 11:47 log.45006595._052336.job.log.1
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas       357 Jun  4 11:47 output.list
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:47 runtime_log
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas    921600 Jun  4 11:47 result.tar.gz
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:47 runtime_log.err
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas       656 Jun  4 11:47 2HpMDmnkug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBBnKDmQJ2Vjm.diag
[2025-06-04 11:47:27] -rw-r--r-- 1 boincer umatlas     21046 Jun  4 11:47 stderr.txt
[2025-06-04 11:47:27] HITS file was successfully produced:
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas 176029887 Jun  4 11:46 shared/HITS.pool.root.1
[2025-06-04 11:47:27]  *** Contents of shared directory: ***
[2025-06-04 11:47:27] total 384076
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas 215803542 Jun  4 10:04 ATLAS.root_0
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:47:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:04 input.tar.gz
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas 176029887 Jun  4 11:46 HITS.pool.root.1
[2025-06-04 11:47:27] -rw------- 1 boincer umatlas    921600 Jun  4 11:47 result.tar.gz
11:47:28 (28467): run_atlas exited; CPU time 45898.313210
11:47:28 (28467): called boinc_finish(0)

</stderr_txt>
]]>

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