Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:42 (47685): wrapper (7.7.26015): starting
10:19:42 (47685): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:19:42] Arguments: --nthreads 8
[2025-06-04 10:19:42] Threads: 8
[2025-06-04 10:19:42] Checking for CVMFS
[2025-06-04 10:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:19:43] 2.11.2.0 5089 28894 292756 146781 3 456 17026873 18432000 8161 130560 0 103160495 99.510 99045851 34460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:19:43] CVMFS is ok
[2025-06-04 10:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:19:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:19:43] Further information can be found at the LHC@home message board.
[2025-06-04 10:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:19:43] Checking for apptainer binary...
[2025-06-04 10:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:19:43] Running /usr/bin/apptainer --version
[2025-06-04 10:19:43] apptainer version 1.3.2-1.el7
[2025-06-04 10:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:19:44] c-211-40.aglt2.org
[2025-06-04 10:19:44] apptainer works
[2025-06-04 10:19:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:19:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:19:44] Starting ATLAS job with PandaID=6667307583
[2025-06-04 10:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:42:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:42:30]  status_code=0
[2025-06-04 11:42:30]  storage_token=
[2025-06-04 11:42:30]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6667307583/log.44871837._070499.job.log.tgz.1
[2025-06-04 11:42:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/3e/log.44871837._070499.job.log.tgz.1
[2025-06-04 11:42:30]  workdir=None
[2025-06-04 11:42:30] ]
[2025-06-04 11:42:30] 2025-06-04 15:41:57,786 | INFO     | transferring file log.44871837._070499.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6667307583/log.44871837._070499.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:42:30] 2025-06-04 15:41:57,786 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6667307583/log.44871837._070499.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._070499.job
[2025-06-04 11:42:30] 2025-06-04 15:41:57,811 | INFO     | adding to output.list: log.44871837._070499.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/3e/log.44871837._070499.job.log.tg
[2025-06-04 11:42:30] 2025-06-04 15:41:57,812 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:42:30] 2025-06-04 15:41:57,812 | INFO     | summary of transferred files:
[2025-06-04 11:42:30] 2025-06-04 15:41:57,812 | INFO     |  -- lfn=log.44871837._070499.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:42:30] 2025-06-04 15:41:57,812 | INFO     | stage-out finished correctly
[2025-06-04 11:42:30] 2025-06-04 15:41:59,846 | WARNING  | process 57926 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:42:30] 2025-06-04 15:41:59,846 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667307583/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:42:30] 2025-06-04 15:41:59,955 | INFO     | number of running child processes to parent process 57926: 1
[2025-06-04 11:42:30] 2025-06-04 15:41:59,956 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:42:30] 2025-06-04 15:42:00,021 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | job 6667307583 has state=finished
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | preparing for final server update for job 6667307583 in state='finished'
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | job 6667307583 has finished - writing final server update
[2025-06-04 11:42:30] 2025-06-04 15:42:01,695 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:42:30] 2025-06-04 15:42:01,698 | INFO     | executing command: lscpu
[2025-06-04 11:42:30] 2025-06-04 15:42:01,906 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:42:30] 2025-06-04 15:42:02,459 | INFO     | monitor loop #375: job 0:6667307583 is in state 'finished'
[2025-06-04 11:42:30] 2025-06-04 15:42:02,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:42:30] 2025-06-04 15:42:04,962 | INFO     | monitor loop #376: job 0:6667307583 is in state 'finished'
[2025-06-04 11:42:30] 2025-06-04 15:42:04,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:42:30] 2025-06-04 15:42:07,462 | INFO     | monitor loop #377: job 0:6667307583 is in state 'finished'
[2025-06-04 11:42:30] 2025-06-04 15:42:07,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:42:30] 2025-06-04 15:42:09,965 | INFO     | monitor loop #378: job 0:6667307583 is in state 'finished'
[2025-06-04 11:42:30] 2025-06-04 15:42:09,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,299 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:42:30] 2025-06-04 15:42:10,299 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667307583/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,299 | INFO     | extracted standard info from prmon json
[2025-06-04 11:42:30] 2025-06-04 15:42:10,299 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:42:30] 2025-06-04 15:42:10,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:42:30] 2025-06-04 15:42:10,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:42:30] 2025-06-04 15:42:10,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | sum of deviations: -228674421.0000001
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | mean x: 1749049337.0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | mean y: 2495833.698630137
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | -- intersect: 3318798408.145587
[2025-06-04 11:42:30] 2025-06-04 15:42:10,301 | INFO     | intersect: 3318798408.145587
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | chi2: 0.0032564515033020693
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | -- intersect: 3318798408.145587
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | current memory leak: -1.90 B/s (using 73 data points, chi2=0.00)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | ..............................
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . Timing measurements:
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . get job = 0 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . initial setup = 2 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . payload setup = 11 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . stage-in = 0 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . payload execution = 4884 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . stage-out = 0 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | . log creation = 0 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,302 | INFO     | ..............................
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | 
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | job summary report
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | --------------------------------------------------
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | PanDA job id: 6667307583
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | task id: 44871837
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | errors: (none)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | pilot state: finished 
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | transexitcode: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | exeerrorcode: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | exeerrordiag: 
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | exitcode: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | exitmsg: OK
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | cpuconsumptiontime: 35891 s
[2025-06-04 11:42:30] 2025-06-04 15:42:10,353 | INFO     | nevents: 400
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | neventsw: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | pid: 57926
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | pgrp: 57926
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | corecount: 8
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | event service: False
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | sizes: {0: 2397392, 8: 2397598, 11: 2397626, 4899: 2423982, 4900: 2432923, 4902: 2432979, 4912: 2433277}
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | --------------------------------------------------
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | 
[2025-06-04 11:42:30] 2025-06-04 15:42:10,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:42:30] 2025-06-04 15:42:10,373 | INFO     | job 6667307583 has completed (purged errors)
[2025-06-04 11:42:30] 2025-06-04 15:42:10,373 | INFO     | overall cleanup function is called
[2025-06-04 11:42:30] 2025-06-04 15:42:11,290 | INFO     | PID=51287 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:42:30] 2025-06-04 15:42:11,290 | INFO     | .. there are 11 such processes running
[2025-06-04 11:42:30] 2025-06-04 15:42:11,379 | INFO     | --- collectZombieJob: --- 10, [57926]
[2025-06-04 11:42:30] 2025-06-04 15:42:11,379 | INFO     | zombie collector waiting for pid 57926
[2025-06-04 11:42:30] 2025-06-04 15:42:11,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:42:30] 2025-06-04 15:42:11,379 | INFO     | collected zombie processes
[2025-06-04 11:42:30] 2025-06-04 15:42:11,379 | INFO     | will attempt to kill all subprocesses of pid=57926
[2025-06-04 11:42:30] 2025-06-04 15:42:11,489 | INFO     | process IDs to be killed: [57926] (in reverse order)
[2025-06-04 11:42:30] 2025-06-04 15:42:11,539 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:42:30] 2025-06-04 15:42:11,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:42:30] 2025-06-04 15:42:11,545 | INFO     | did not find any defunct processes belonging to 57926
[2025-06-04 11:42:30] 2025-06-04 15:42:11,548 | INFO     | did not find any defunct processes belonging to 57926
[2025-06-04 11:42:30] 2025-06-04 15:42:11,549 | INFO     | ready for new job
[2025-06-04 11:42:30] 2025-06-04 15:42:11,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:42:30] 2025-06-04 15:42:11,550 | INFO     | **************************************
[2025-06-04 11:42:30] 2025-06-04 15:42:11,550 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:42:30] 2025-06-04 15:42:11,550 | INFO     | **************************************
[2025-06-04 11:42:30] 2025-06-04 15:42:11,550 | INFO     | 
[2025-06-04 11:42:30] 2025-06-04 15:42:11,552 | INFO     | architecture information:
[2025-06-04 11:42:30] 2025-06-04 15:42:11,552 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:42:30] 2025-06-04 15:42:11,686 | INFO     | cat /etc/os-release:
[2025-06-04 11:42:30] NAME="CentOS Linux"
[2025-06-04 11:42:30] VERSION="7 (Core)"
[2025-06-04 11:42:30] ID="centos"
[2025-06-04 11:42:30] ID_LIKE="rhel fedora"
[2025-06-04 11:42:30] VERSION_ID="7"
[2025-06-04 11:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:42:30] ANSI_COLOR="0;31"
[2025-06-04 11:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:42:30] HOME_URL="https://www.centos.org/"
[2025-06-04 11:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:42:30] 
[2025-06-04 11:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:42:30] 
[2025-06-04 11:42:30] 2025-06-04 15:42:11,686 | INFO     | **************************************
[2025-06-04 11:42:30] 2025-06-04 15:42:12,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | INFO     | sufficient remaining disk space (76248252416 B)
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | INFO     | update_server=False
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:42:30] 2025-06-04 15:42:12,205 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:42:30] 2025-06-04 15:42:12,206 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:42:30] 2025-06-04 15:42:12,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:42:30] 2025-06-04 15:42:12,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:42:30] 2025-06-04 15:42:12,272 | INFO     | all data control threads have been joined
[2025-06-04 11:42:30] 2025-06-04 15:42:12,468 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:42:30] 2025-06-04 15:42:12,468 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:42:30] 2025-06-04 15:42:12,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:42:30] 2025-06-04 15:42:12,468 | INFO     | will abort loop
[2025-06-04 11:42:30] 2025-06-04 15:42:13,209 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,209 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,273 | INFO     | [data] control thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:42:30] 2025-06-04 15:42:13,385 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,460 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,469 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:13,602 | INFO     | all payload control threads have been joined
[2025-06-04 11:42:30] 2025-06-04 15:42:13,666 | INFO     | all job control threads have been joined
[2025-06-04 11:42:30] 2025-06-04 15:42:14,220 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,272 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,278 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,383 | INFO     | [job] validate thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,603 | INFO     | [payload] control thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,653 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:14,670 | INFO     | [job] control thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:15,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:42:30] 2025-06-04 15:42:15,384 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:19,089 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:22,588 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:42:30] 2025-06-04 15:42:23,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:42:30] 2025-06-04 15:42:24,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389810870080)>', '<ExcThread(monitor, started 140389369497344)>']
[2025-06-04 11:42:30] 2025-06-04 15:42:25,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:42:30] 2025-06-04 15:42:25,269 | INFO     | [monitor] control thread has ended
[2025-06-04 11:42:30] 2025-06-04 15:42:29,897 | INFO     | all workflow threads have been joined
[2025-06-04 11:42:30] 2025-06-04 15:42:29,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:42:30] 2025-06-04 15:42:29,897 | INFO     | traces error code: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:29,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:42:30] 2025-06-04 15:42:29,960 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:42:30] 2025-06-04 15:42:29,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:42:30] 2025-06-04 15:42:29,966 [wrapper] pilotpid: 51287
[2025-06-04 11:42:30] 2025-06-04 15:42:29,982 [wrapper] Pilot exit status: 0
[2025-06-04 11:42:30] 2025-06-04 15:42:30,046 [wrapper] pandaids: 6667307583
[2025-06-04 11:42:30] 2025-06-04 15:42:30,095 [wrapper] cleanup supervisor_pilot 36472 51288
[2025-06-04 11:42:30] 2025-06-04 15:42:30,097 [wrapper] Test setup, not cleaning
[2025-06-04 11:42:30] 2025-06-04 15:42:30,099 [wrapper] apfmon messages muted
[2025-06-04 11:42:30] 2025-06-04 15:42:30,101 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:42:30] 2025-06-04 15:42:30,103 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:42:30]  *** Error codes and diagnostics ***
[2025-06-04 11:42:30]     "exeErrorCode": 0,
[2025-06-04 11:42:30]     "exeErrorDiag": "",
[2025-06-04 11:42:30]     "pilotErrorCode": 0,
[2025-06-04 11:42:30]     "pilotErrorDiag": "",
[2025-06-04 11:42:30]  *** Listing of results directory ***
[2025-06-04 11:42:30] total 412900
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas    495897 May 27 12:39 pilot3.tar.gz
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas      5111 May 27 12:50 queuedata.json
[2025-06-04 11:42:30] -rwx------ 1 boincer umatlas     37140 May 27 12:52 runpilot2-wrapper.sh
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:42:30] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:19 run_atlas
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:19 job.xml
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas 223372469 Jun  4 10:19 EVNT.44871834._002771.pool.root.1
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:19 start_atlas.sh
[2025-06-04 11:42:30] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:19 shared
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 10:19 input.tar.gz
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:19 boinc_lockfile
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 10:19 pandaJob.out
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas    986819 Jun  4 10:19 agis_schedconf.cvmfs.json
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas   1598969 Jun  4 10:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:42:30] drwx------ 4 boincer umatlas      4096 Jun  4 10:20 pilot3
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas      6337 Jun  4 11:37 init_data.xml
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas 194021033 Jun  4 11:41 HITS.44871837._070499.pool.root.1
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:41 boinc_task_state.xml
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas        95 Jun  4 11:41 pilot_heartbeat.json
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas      1063 Jun  4 11:41 memory_monitor_summary.json
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas    304716 Jun  4 11:41 log.44871837._070499.job.log.tgz.1
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas      7728 Jun  4 11:42 heartbeat.json
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:42 boinc_mmap_file
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:42 wrapper_checkpoint.txt
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas      4734 Jun  4 11:42 pilotlog.txt
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas    488280 Jun  4 11:42 log.44871837._070499.job.log.1
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas       357 Jun  4 11:42 output.list
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:42 runtime_log
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas    808960 Jun  4 11:42 result.tar.gz
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:42 runtime_log.err
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas       657 Jun  4 11:42 FvQKDmBiCe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmE8RKDm7GWV3m.diag
[2025-06-04 11:42:30] -rw-r--r-- 1 boincer umatlas     22109 Jun  4 11:42 stderr.txt
[2025-06-04 11:42:30] HITS file was successfully produced:
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas 194021033 Jun  4 11:41 shared/HITS.pool.root.1
[2025-06-04 11:42:30]  *** Contents of shared directory: ***
[2025-06-04 11:42:30] total 408928
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas 223372469 Jun  4 10:19 ATLAS.root_0
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:19 start_atlas.sh
[2025-06-04 11:42:30] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 10:19 input.tar.gz
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas 194021033 Jun  4 11:41 HITS.pool.root.1
[2025-06-04 11:42:30] -rw------- 1 boincer umatlas    808960 Jun  4 11:42 result.tar.gz
11:42:32 (47685): run_atlas exited; CPU time 35538.109973
11:42:32 (47685): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN