Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:23:53 (2559384): wrapper (7.7.26015): starting
06:23:53 (2559384): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 06:23:53] Arguments: --nthreads 4
[2025-06-06 06:23:53] Threads: 4
[2025-06-06 06:23:53] Checking for CVMFS
[2025-06-06 06:23:53] No cvmfs_config command found, will try listing directly
[2025-06-06 06:23:53] CVMFS is ok
[2025-06-06 06:23:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:23:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:23:53] Further information can be found at the LHC@home message board.
[2025-06-06 06:23:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:23:53] Checking for apptainer binary...
[2025-06-06 06:23:53] which: no apptainer in ((null))
[2025-06-06 06:23:53] apptainer is not installed, using version from CVMFS
[2025-06-06 06:23:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:23:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-06 06:23:53] apptainer works
[2025-06-06 06:23:53] Set ATHENA_PROC_NUMBER=4
[2025-06-06 06:23:53] Set ATHENA_CORE_NUMBER=4
[2025-06-06 06:23:53] Starting ATLAS job with PandaID=6679690226
[2025-06-06 06:23:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:59:32]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:59:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 07:59:32]  is_altstaged=None
[2025-06-06 07:59:32]  is_tar=False
[2025-06-06 07:59:32]  lfn=log.45006595._056625.job.log.tgz.1
[2025-06-06 07:59:32]  mtime=0
[2025-06-06 07:59:32]  protocol_id=None
[2025-06-06 07:59:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 07:59:32]  replicas=None
[2025-06-06 07:59:32]  scope=mc23_13p6TeV
[2025-06-06 07:59:32]  status=None
[2025-06-06 07:59:32]  status_code=0
[2025-06-06 07:59:32]  storage_token=
[2025-06-06 07:59:32]  surl=/scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6679690226/log.45006595._056625.job.log.tgz.1
[2025-06-06 07:59:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/e0/log.45006595._056625.job.log.tgz.1
[2025-06-06 07:59:32]  workdir=None
[2025-06-06 07:59:32] ]
[2025-06-06 07:59:32] 2025-06-06 05:59:05,598 | INFO     | transferring file log.45006595._056625.job.log.tgz.1 from /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6679690226/log.45006595._056625.job.log.tgz.1 to /scratch/
[2025-06-06 07:59:32] 2025-06-06 05:59:05,598 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6679690226/log.45006595._056625.job.log.tgz.1 /scratch/boinc/var/slot120/slots/0/
[2025-06-06 07:59:32] 2025-06-06 05:59:05,617 | INFO     | adding to output.list: log.45006595._056625.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/e0/log.45006595._056625.job.log.tg
[2025-06-06 07:59:32] 2025-06-06 05:59:05,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 07:59:32] 2025-06-06 05:59:05,618 | INFO     | summary of transferred files:
[2025-06-06 07:59:32] 2025-06-06 05:59:05,618 | INFO     |  -- lfn=log.45006595._056625.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 07:59:32] 2025-06-06 05:59:05,618 | INFO     | stage-out finished correctly
[2025-06-06 07:59:32] 2025-06-06 05:59:08,232 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 07:59:32] 2025-06-06 05:59:08,309 | INFO     | job 6679690226 has state=finished
[2025-06-06 07:59:32] 2025-06-06 05:59:08,309 | INFO     | preparing for final server update for job 6679690226 in state='finished'
[2025-06-06 07:59:32] 2025-06-06 05:59:08,309 | INFO     | this job has now completed (state=finished)
[2025-06-06 07:59:32] 2025-06-06 05:59:08,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 07:59:32] 2025-06-06 05:59:08,310 | INFO     | log transfer has been attempted: DONE
[2025-06-06 07:59:32] 2025-06-06 05:59:08,310 | INFO     | job 6679690226 has finished - writing final server update
[2025-06-06 07:59:32] 2025-06-06 05:59:08,310 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_8999/.job.ad'
[2025-06-06 07:59:32] 2025-06-06 05:59:08,310 | INFO     | total number of processed events: 400 (read)
[2025-06-06 07:59:32] 2025-06-06 05:59:08,316 | INFO     | executing command: lscpu
[2025-06-06 07:59:32] 2025-06-06 05:59:08,389 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 07:59:32] 2025-06-06 05:59:09,643 | WARNING  | process 2571122 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 07:59:32] 2025-06-06 05:59:09,644 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6679690226/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:59:32] 2025-06-06 05:59:09,997 | INFO     | number of running child processes to parent process 2571122: 1
[2025-06-06 07:59:32] 2025-06-06 05:59:09,998 | INFO     | maximum number of monitored processes: 6
[2025-06-06 07:59:32] 2025-06-06 05:59:12,274 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 07:59:32] 2025-06-06 05:59:12,274 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6679690226/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:59:32] 2025-06-06 05:59:12,275 | INFO     | extracted standard info from prmon json
[2025-06-06 07:59:32] 2025-06-06 05:59:12,275 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:59:32] 2025-06-06 05:59:12,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:59:32] 2025-06-06 05:59:12,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:59:32] 2025-06-06 05:59:12,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:59:32] 2025-06-06 05:59:12,277 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:59:32] 2025-06-06 05:59:12,277 | INFO     | sum of square deviations: 197203697.5
[2025-06-06 07:59:32] 2025-06-06 05:59:12,277 | INFO     | sum of deviations: -9454126632.500002
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | mean x: 1749186772.5
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | mean y: 2429514.569767442
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | -- intersect: 83860052169.4846
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | intersect: 83860052169.4846
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | chi2: 0.02803654321867663
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | -- intersect: 83860052169.4846
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | current memory leak: -47.94 B/s (using 86 data points, chi2=0.03)
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | ..............................
[2025-06-06 07:59:32] 2025-06-06 05:59:12,278 | INFO     | . Timing measurements:
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . get job = 0 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . initial setup = 1 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . payload setup = 8 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . stage-in = 0 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . payload execution = 5671 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . stage-out = 0 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | . log creation = 0 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,279 | INFO     | ..............................
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | 
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | job summary report
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | --------------------------------------------------
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | PanDA job id: 6679690226
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | task id: 45006595
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | errors: (none)
[2025-06-06 07:59:32] 2025-06-06 05:59:12,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | pilot state: finished 
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | transexitcode: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | exeerrorcode: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | exeerrordiag: 
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | exitcode: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | exitmsg: OK
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | cpuconsumptiontime: 21326 s
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | nevents: 400
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | neventsw: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | pid: 2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | pgrp: 2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | corecount: 4
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | event service: False
[2025-06-06 07:59:32] 2025-06-06 05:59:12,445 | INFO     | sizes: {0: 2396413, 1: 2397281, 7: 2397487, 12: 2397515, 5683: 2424138, 5684: 2433103, 5687: 2433287, 5691: 2433457}
[2025-06-06 07:59:32] 2025-06-06 05:59:12,446 | INFO     | --------------------------------------------------
[2025-06-06 07:59:32] 2025-06-06 05:59:12,446 | INFO     | 
[2025-06-06 07:59:32] 2025-06-06 05:59:12,446 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-06 07:59:32] 2025-06-06 05:59:12,467 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | job 6679690226 has completed (purged errors)
[2025-06-06 07:59:32] 2025-06-06 05:59:12,469 | INFO     | overall cleanup function is called
[2025-06-06 07:59:32] 2025-06-06 05:59:13,478 | INFO     | --- collectZombieJob: --- 10, [2571122]
[2025-06-06 07:59:32] 2025-06-06 05:59:13,478 | INFO     | zombie collector waiting for pid 2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:13,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:59:32] 2025-06-06 05:59:13,478 | INFO     | collected zombie processes
[2025-06-06 07:59:32] 2025-06-06 05:59:13,478 | INFO     | will attempt to kill all subprocesses of pid=2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:13,830 | INFO     | process IDs to be killed: [2571122] (in reverse order)
[2025-06-06 07:59:32] 2025-06-06 05:59:13,958 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:59:32] 2025-06-06 05:59:13,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:59:32] 2025-06-06 05:59:13,975 | INFO     | did not find any defunct processes belonging to 2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:13,986 | INFO     | did not find any defunct processes belonging to 2571122
[2025-06-06 07:59:32] 2025-06-06 05:59:13,986 | INFO     | ready for new job
[2025-06-06 07:59:32] 2025-06-06 05:59:13,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:59:32] 2025-06-06 05:59:13,988 | INFO     | **************************************
[2025-06-06 07:59:32] 2025-06-06 05:59:13,988 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:59:32] 2025-06-06 05:59:13,988 | INFO     | **************************************
[2025-06-06 07:59:32] 2025-06-06 05:59:13,988 | INFO     | 
[2025-06-06 07:59:32] 2025-06-06 05:59:13,993 | INFO     | architecture information:
[2025-06-06 07:59:32] 2025-06-06 05:59:13,993 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:59:32] 2025-06-06 05:59:14,008 | INFO     | cat /etc/os-release:
[2025-06-06 07:59:32] NAME="CentOS Linux"
[2025-06-06 07:59:32] VERSION="7 (Core)"
[2025-06-06 07:59:32] ID="centos"
[2025-06-06 07:59:32] ID_LIKE="rhel fedora"
[2025-06-06 07:59:32] VERSION_ID="7"
[2025-06-06 07:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:59:32] ANSI_COLOR="0;31"
[2025-06-06 07:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:59:32] HOME_URL="https://www.centos.org/"
[2025-06-06 07:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:59:32] 
[2025-06-06 07:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:59:32] 
[2025-06-06 07:59:32] 2025-06-06 05:59:14,008 | INFO     | **************************************
[2025-06-06 07:59:32] 2025-06-06 05:59:14,511 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-06 07:59:32] 2025-06-06 05:59:14,530 | INFO     | sufficient remaining disk space (3312584753152 B)
[2025-06-06 07:59:32] 2025-06-06 05:59:14,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:59:32] 2025-06-06 05:59:14,530 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:59:32] 2025-06-06 05:59:14,531 | INFO     | update_server=False
[2025-06-06 07:59:32] 2025-06-06 05:59:14,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:59:32] 2025-06-06 05:59:14,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:59:32] 2025-06-06 05:59:14,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:59:32] 2025-06-06 05:59:15,008 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 07:59:32] 2025-06-06 05:59:15,008 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 07:59:32] 2025-06-06 05:59:15,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:59:32] 2025-06-06 05:59:15,009 | INFO     | will abort loop
[2025-06-06 07:59:32] 2025-06-06 05:59:15,019 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:59:32] 2025-06-06 05:59:15,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:59:32] 2025-06-06 05:59:15,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:59:32] 2025-06-06 05:59:15,141 | INFO     | all job control threads have been joined
[2025-06-06 07:59:32] 2025-06-06 05:59:15,141 | INFO     | all payload control threads have been joined
[2025-06-06 07:59:32] 2025-06-06 05:59:15,169 | INFO     | all data control threads have been joined
[2025-06-06 07:59:32] 2025-06-06 05:59:15,536 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:15,655 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:15,656 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,014 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,146 | INFO     | [job] control thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,147 | INFO     | [payload] control thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,175 | INFO     | [data] control thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,256 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,457 | INFO     | [job] validate thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,509 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,537 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,794 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:16,941 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:17,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:59:32] 2025-06-06 05:59:18,357 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:18,538 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:24,825 | INFO     | job.realtimelogging is not enabled
[2025-06-06 07:59:32] 2025-06-06 05:59:25,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:59:32] 2025-06-06 05:59:27,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23250660591424)>', '<ExcThread(monitor, started 23250419541760)>']
[2025-06-06 07:59:32] 2025-06-06 05:59:28,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:59:32] 2025-06-06 05:59:28,080 | INFO     | [monitor] control thread has ended
[2025-06-06 07:59:32] 2025-06-06 05:59:32,218 | INFO     | all workflow threads have been joined
[2025-06-06 07:59:32] 2025-06-06 05:59:32,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:59:32] 2025-06-06 05:59:32,218 | INFO     | traces error code: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:32,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:59:32] 2025-06-06 05:59:32,340 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:59:32] 2025-06-06 05:59:32,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:59:32] 2025-06-06 05:59:32,346 [wrapper] pilotpid: 2563370
[2025-06-06 07:59:32] 2025-06-06 05:59:32,349 [wrapper] Pilot exit status: 0
[2025-06-06 07:59:32] 2025-06-06 05:59:32,361 [wrapper] pandaids: 6679690226
[2025-06-06 07:59:32] 2025-06-06 05:59:32,453 [wrapper] cleanup supervisor_pilot 2731753 2563371
[2025-06-06 07:59:32] 2025-06-06 05:59:32,456 [wrapper] Test setup, not cleaning
[2025-06-06 07:59:32] 2025-06-06 05:59:32,459 [wrapper] apfmon messages muted
[2025-06-06 07:59:32] 2025-06-06 05:59:32,462 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:59:32] 2025-06-06 05:59:32,464 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:59:32]  *** Error codes and diagnostics ***
[2025-06-06 07:59:32]     "exeErrorCode": 0,
[2025-06-06 07:59:32]     "exeErrorDiag": "",
[2025-06-06 07:59:32]     "pilotErrorCode": 0,
[2025-06-06 07:59:32]     "pilotErrorDiag": "",
[2025-06-06 07:59:32]  *** Listing of results directory ***
[2025-06-06 07:59:32] total 395800
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc    495897 Jun  4 14:18 pilot3.tar.gz
[2025-06-06 07:59:32] -rwx------ 1 boinc boinc     37140 Jun  4 14:31 runpilot2-wrapper.sh
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc      5111 Jun  4 14:31 queuedata.json
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc       100 Jun  6 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:59:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:23 run_atlas
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc       105 Jun  6 06:23 job.xml
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc      6688 Jun  6 06:23 init_data.xml
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc 217503567 Jun  6 06:23 EVNT.45006593._001875.pool.root.1
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:23 start_atlas.sh
[2025-06-06 07:59:32] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:23 shared
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc    508887 Jun  6 06:23 input.tar.gz
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc         0 Jun  6 06:23 boinc_lockfile
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc      2524 Jun  6 06:23 pandaJob.out
[2025-06-06 07:59:32] -rw------- 1 boinc boinc    988125 Jun  6 06:24 agis_schedconf.cvmfs.json
[2025-06-06 07:59:32] -rw------- 1 boinc boinc   1598969 Jun  6 06:24 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:59:32] drwx------ 4 boinc boinc      4096 Jun  6 06:24 pilot3
[2025-06-06 07:59:32] -rw------- 1 boinc boinc        95 Jun  6 07:58 pilot_heartbeat.json
[2025-06-06 07:59:32] -rw------- 1 boinc boinc 182360019 Jun  6 07:58 HITS.45006595._056625.pool.root.1
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc       529 Jun  6 07:58 boinc_task_state.xml
[2025-06-06 07:59:32] -rw------- 1 boinc boinc      1041 Jun  6 07:59 memory_monitor_summary.json
[2025-06-06 07:59:32] -rw------- 1 boinc boinc    253763 Jun  6 07:59 log.45006595._056625.job.log.tgz.1
[2025-06-06 07:59:32] -rw------- 1 boinc boinc      7702 Jun  6 07:59 heartbeat.json
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc      8192 Jun  6 07:59 boinc_mmap_file
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc        27 Jun  6 07:59 wrapper_checkpoint.txt
[2025-06-06 07:59:32] -rw------- 1 boinc boinc      4623 Jun  6 07:59 pilotlog.txt
[2025-06-06 07:59:32] -rw------- 1 boinc boinc    548195 Jun  6 07:59 log.45006595._056625.job.log.1
[2025-06-06 07:59:32] -rw------- 1 boinc boinc       357 Jun  6 07:59 output.list
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc       620 Jun  6 07:59 runtime_log
[2025-06-06 07:59:32] -rw------- 1 boinc boinc    819200 Jun  6 07:59 result.tar.gz
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc      9040 Jun  6 07:59 runtime_log.err
[2025-06-06 07:59:32] -rw------- 1 boinc boinc       662 Jun  6 07:59 6AqMDm4R2g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmynKDm91JY5m.diag
[2025-06-06 07:59:32] -rw-r--r-- 1 boinc boinc     21195 Jun  6 07:59 stderr.txt
[2025-06-06 07:59:32] HITS file was successfully produced:
[2025-06-06 07:59:32] -rw------- 1 boinc boinc 182360019 Jun  6 07:58 shared/HITS.pool.root.1
[2025-06-06 07:59:32]  *** Contents of shared directory: ***
[2025-06-06 07:59:32] total 391820
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc 217503567 Jun  6 06:23 ATLAS.root_0
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:23 start_atlas.sh
[2025-06-06 07:59:32] -rw-r--r-- 2 boinc boinc    508887 Jun  6 06:23 input.tar.gz
[2025-06-06 07:59:32] -rw------- 1 boinc boinc 182360019 Jun  6 07:58 HITS.pool.root.1
[2025-06-06 07:59:32] -rw------- 1 boinc boinc    819200 Jun  6 07:59 result.tar.gz
07:59:33 (2559384): run_atlas exited; CPU time 21574.070231
07:59:33 (2559384): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN