Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:45:50 (2811444): wrapper (7.7.26015): starting
06:45:50 (2811444): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 06:45:50] Arguments: --nthreads 12
[2025-06-05 06:45:50] Threads: 12
[2025-06-05 06:45:50] Checking for CVMFS
[2025-06-05 06:45:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:45:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:45:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:45:51] 2.12.7.0 28267 2987 81528 146809 1 56 3745152 4096001 1002 130560 0 7749874 99.997 711921 160 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 06:45:51] CVMFS is ok
[2025-06-05 06:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:45:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 06:45:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 06:45:51] Further information can be found at the LHC@home message board.
[2025-06-05 06:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:45:51] Checking for apptainer binary...
[2025-06-05 06:45:51] apptainer is not installed, using version from CVMFS
[2025-06-05 06:45:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:45:51] ryzen7
[2025-06-05 06:45:51] apptainer works
[2025-06-05 06:45:51] Set ATHENA_PROC_NUMBER=12
[2025-06-05 06:45:51] Set ATHENA_CORE_NUMBER=12
[2025-06-05 06:45:51] Starting ATLAS job with PandaID=6679423368
[2025-06-05 06:45:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:12:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:12:59]  is_altstaged=None
[2025-06-05 08:12:59]  is_tar=False
[2025-06-05 08:12:59]  lfn=log.44871837._102183.job.log.tgz.1
[2025-06-05 08:12:59]  mtime=0
[2025-06-05 08:12:59]  protocol_id=None
[2025-06-05 08:12:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 08:12:59]  replicas=None
[2025-06-05 08:12:59]  scope=mc23_13p6TeV
[2025-06-05 08:12:59]  status=None
[2025-06-05 08:12:59]  status_code=0
[2025-06-05 08:12:59]  storage_token=
[2025-06-05 08:12:59]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6679423368/log.44871837._102183.job.log.tgz.1
[2025-06-05 08:12:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/87/log.44871837._102183.job.log.tgz.1
[2025-06-05 08:12:59]  workdir=None
[2025-06-05 08:12:59] ]
[2025-06-05 08:12:59] 2025-06-05 08:12:30,779 | INFO     | transferring file log.44871837._102183.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6679423368/log.44871837._102183.job.log.tgz.1 t
[2025-06-05 08:12:59] 2025-06-05 08:12:30,780 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6679423368/log.44871837._102183.job.log.tgz.1 /opt/boinc/instance_home
[2025-06-05 08:12:59] 2025-06-05 08:12:30,795 | INFO     | adding to output.list: log.44871837._102183.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/87/log.44871837._102183.job.log.tg
[2025-06-05 08:12:59] 2025-06-05 08:12:30,796 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 08:12:59] 2025-06-05 08:12:30,796 | INFO     | summary of transferred files:
[2025-06-05 08:12:59] 2025-06-05 08:12:30,796 | INFO     |  -- lfn=log.44871837._102183.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 08:12:59] 2025-06-05 08:12:30,796 | INFO     | stage-out finished correctly
[2025-06-05 08:12:59] 2025-06-05 08:12:31,405 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 08:12:59] 2025-06-05 08:12:32,629 | INFO     | monitor loop #387: job 0:6679423368 is in state 'finished'
[2025-06-05 08:12:59] 2025-06-05 08:12:32,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:59] 2025-06-05 08:12:34,158 | INFO     | job 6679423368 has state=finished
[2025-06-05 08:12:59] 2025-06-05 08:12:34,158 | INFO     | preparing for final server update for job 6679423368 in state='finished'
[2025-06-05 08:12:59] 2025-06-05 08:12:34,158 | INFO     | this job has now completed (state=finished)
[2025-06-05 08:12:59] 2025-06-05 08:12:34,158 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 08:12:59] 2025-06-05 08:12:34,159 | INFO     | log transfer has been attempted: DONE
[2025-06-05 08:12:59] 2025-06-05 08:12:34,159 | INFO     | job 6679423368 has finished - writing final server update
[2025-06-05 08:12:59] 2025-06-05 08:12:34,159 | INFO     | total number of processed events: 400 (read)
[2025-06-05 08:12:59] 2025-06-05 08:12:34,183 | INFO     | executing command: lscpu
[2025-06-05 08:12:59] 2025-06-05 08:12:34,200 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:12:59] 2025-06-05 08:12:35,133 | INFO     | monitor loop #388: job 0:6679423368 is in state 'finished'
[2025-06-05 08:12:59] 2025-06-05 08:12:35,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:59] 2025-06-05 08:12:37,638 | INFO     | monitor loop #389: job 0:6679423368 is in state 'finished'
[2025-06-05 08:12:59] 2025-06-05 08:12:37,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:12:59] 2025-06-05 08:12:38,344 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6679423368/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,344 | INFO     | extracted standard info from prmon json
[2025-06-05 08:12:59] 2025-06-05 08:12:38,344 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:12:59] 2025-06-05 08:12:38,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:12:59] 2025-06-05 08:12:38,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:12:59] 2025-06-05 08:12:38,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | sum of deviations: -5558264124.0
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | mean x: 1749108630.5
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | mean y: 2743170.7435897435
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | -- intersect: 66081995409.54213
[2025-06-05 08:12:59] 2025-06-05 08:12:38,346 | INFO     | intersect: 66081995409.54213
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | chi2: 0.02762813959141236
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | -- intersect: 66081995409.54213
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | current memory leak: -37.78 B/s (using 78 data points, chi2=0.03)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | ..............................
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . Timing measurements:
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . get job = 0 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . initial setup = 1 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . payload setup = 3 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . stage-in = 0 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . payload execution = 5173 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . stage-out = 0 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | . log creation = 0 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,347 | INFO     | ..............................
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | 
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | job summary report
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | --------------------------------------------------
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | PanDA job id: 6679423368
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | task id: 44871837
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | errors: (none)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | pilot state: finished 
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | transexitcode: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | exeerrorcode: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:38,405 | INFO     | exeerrordiag: 
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | exitcode: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | exitmsg: OK
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | cpuconsumptiontime: 30369 s
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | nevents: 400
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | neventsw: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | pid: 2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | pgrp: 2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | corecount: 12
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | event service: False
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | sizes: {0: 2397365, 2: 2397571, 10: 2397599, 5180: 2432941, 5181: 2432941, 5188: 2433111}
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | --------------------------------------------------
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | 
[2025-06-05 08:12:59] 2025-06-05 08:12:38,406 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | job 6679423368 has completed (purged errors)
[2025-06-05 08:12:59] 2025-06-05 08:12:38,418 | INFO     | overall cleanup function is called
[2025-06-05 08:12:59] 2025-06-05 08:12:39,422 | INFO     | --- collectZombieJob: --- 10, [2827498]
[2025-06-05 08:12:59] 2025-06-05 08:12:39,422 | INFO     | zombie collector waiting for pid 2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:39,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:12:59] 2025-06-05 08:12:39,422 | INFO     | collected zombie processes
[2025-06-05 08:12:59] 2025-06-05 08:12:39,422 | INFO     | will attempt to kill all subprocesses of pid=2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:39,470 | INFO     | process IDs to be killed: [2827498] (in reverse order)
[2025-06-05 08:12:59] 2025-06-05 08:12:39,493 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:12:59] 2025-06-05 08:12:39,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:12:59] 2025-06-05 08:12:39,495 | INFO     | did not find any defunct processes belonging to 2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:39,496 | INFO     | did not find any defunct processes belonging to 2827498
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | ready for new job
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | **************************************
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | **************************************
[2025-06-05 08:12:59] 2025-06-05 08:12:39,497 | INFO     | 
[2025-06-05 08:12:59] 2025-06-05 08:12:39,514 | INFO     | architecture information:
[2025-06-05 08:12:59] 2025-06-05 08:12:39,514 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:12:59] 2025-06-05 08:12:39,558 | INFO     | cat /etc/os-release:
[2025-06-05 08:12:59] NAME="CentOS Linux"
[2025-06-05 08:12:59] VERSION="7 (Core)"
[2025-06-05 08:12:59] ID="centos"
[2025-06-05 08:12:59] ID_LIKE="rhel fedora"
[2025-06-05 08:12:59] VERSION_ID="7"
[2025-06-05 08:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:12:59] ANSI_COLOR="0;31"
[2025-06-05 08:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:12:59] HOME_URL="https://www.centos.org/"
[2025-06-05 08:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:12:59] 
[2025-06-05 08:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:12:59] 
[2025-06-05 08:12:59] 2025-06-05 08:12:39,558 | INFO     | **************************************
[2025-06-05 08:12:59] 2025-06-05 08:12:40,061 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | INFO     | sufficient remaining disk space (185697566720 B)
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | INFO     | update_server=False
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:12:59] 2025-06-05 08:12:40,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:12:59] 2025-06-05 08:12:40,141 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:12:59] 2025-06-05 08:12:40,141 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:12:59] 2025-06-05 08:12:40,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:12:59] 2025-06-05 08:12:40,141 | INFO     | will abort loop
[2025-06-05 08:12:59] 2025-06-05 08:12:40,390 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:12:59] 2025-06-05 08:12:40,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:12:59] 2025-06-05 08:12:40,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:12:59] 2025-06-05 08:12:40,939 | INFO     | all job control threads have been joined
[2025-06-05 08:12:59] 2025-06-05 08:12:41,030 | INFO     | all payload control threads have been joined
[2025-06-05 08:12:59] 2025-06-05 08:12:41,074 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,074 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,134 | INFO     | all data control threads have been joined
[2025-06-05 08:12:59] 2025-06-05 08:12:41,146 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,250 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,270 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:12:59] 2025-06-05 08:12:41,744 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,910 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,926 | INFO     | [job] validate thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,942 | INFO     | [job] control thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:41,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:12:59] 2025-06-05 08:12:42,034 | INFO     | [payload] control thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:42,058 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:42,138 | INFO     | [data] control thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:42,502 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:43,374 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:45,970 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:50,978 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:12:59] 2025-06-05 08:12:51,982 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:12:59] 2025-06-05 08:12:53,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667629213504)>', '<ExcThread(monitor, started 139666833536768)>']
[2025-06-05 08:12:59] 2025-06-05 08:12:54,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:12:59] 2025-06-05 08:12:54,450 | INFO     | [monitor] control thread has ended
[2025-06-05 08:12:59] 2025-06-05 08:12:59,014 | INFO     | all workflow threads have been joined
[2025-06-05 08:12:59] 2025-06-05 08:12:59,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:12:59] 2025-06-05 08:12:59,014 | INFO     | traces error code: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:59,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:12:59] 2025-06-05 08:12:59,091 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:12:59] 2025-06-05 08:12:59,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:12:59] 2025-06-05 08:12:59,094 [wrapper] pilotpid: 2815117
[2025-06-05 08:12:59] 2025-06-05 08:12:59,102 [wrapper] Pilot exit status: 0
[2025-06-05 08:12:59] 2025-06-05 08:12:59,119 [wrapper] pandaids: 6679423368
[2025-06-05 08:12:59] 2025-06-05 08:12:59,137 [wrapper] cleanup supervisor_pilot 2858997 2815118
[2025-06-05 08:12:59] 2025-06-05 08:12:59,139 [wrapper] Test setup, not cleaning
[2025-06-05 08:12:59] 2025-06-05 08:12:59,141 [wrapper] apfmon messages muted
[2025-06-05 08:12:59] 2025-06-05 08:12:59,142 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:12:59] 2025-06-05 08:12:59,150 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:12:59]  *** Error codes and diagnostics ***
[2025-06-05 08:12:59]     "exeErrorCode": 0,
[2025-06-05 08:12:59]     "exeErrorDiag": "",
[2025-06-05 08:12:59]     "pilotErrorCode": 0,
[2025-06-05 08:12:59]     "pilotErrorDiag": "",
[2025-06-05 08:12:59]  *** Listing of results directory ***
[2025-06-05 08:12:59] total 416584
[2025-06-05 08:12:59] -rw-r--r-- 1 boinc boinc    495897 Jun  4 08:46 pilot3.tar.gz
[2025-06-05 08:12:59] -rwx------ 1 boinc boinc     37140 Jun  4 09:03 runpilot2-wrapper.sh
[2025-06-05 08:12:59] -rw-r--r-- 1 boinc boinc      5111 Jun  4 09:03 queuedata.json
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc       100 Jun  5 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:12:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:45 run_atlas
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc       105 Jun  5 06:45 job.xml
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 08:12:59] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:45 shared
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc    508875 Jun  5 06:45 input.tar.gz
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc      9704 Jun  5 06:45 init_data.xml
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc 224294479 Jun  5 06:45 EVNT.44871834._002522.pool.root.1
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc         0 Jun  5 06:45 boinc_lockfile
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc      2559 Jun  5 06:45 pandaJob.out
[2025-06-05 08:12:59] -rw------- 1 boinc boinc    986926 Jun  5 06:45 agis_schedconf.cvmfs.json
[2025-06-05 08:12:59] -rw------- 1 boinc boinc   1598969 Jun  5 06:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:12:59] drwx------ 4 boinc boinc      4096 Jun  5 06:45 pilot3
[2025-06-05 08:12:59] -rw------- 1 boinc boinc        95 Jun  5 08:11 pilot_heartbeat.json
[2025-06-05 08:12:59] -rw------- 1 boinc boinc 196641440 Jun  5 08:12 HITS.44871837._102183.pool.root.1
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc       529 Jun  5 08:12 boinc_task_state.xml
[2025-06-05 08:12:59] -rw------- 1 boinc boinc      1015 Jun  5 08:12 memory_monitor_summary.json
[2025-06-05 08:12:59] -rw------- 1 boinc boinc    380031 Jun  5 08:12 log.44871837._102183.job.log.tgz.1
[2025-06-05 08:12:59] -rw------- 1 boinc boinc      7650 Jun  5 08:12 heartbeat.json
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 08:12 boinc_mmap_file
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc        27 Jun  5 08:12 wrapper_checkpoint.txt
[2025-06-05 08:12:59] -rw------- 1 boinc boinc      4635 Jun  5 08:12 pilotlog.txt
[2025-06-05 08:12:59] -rw------- 1 boinc boinc    525276 Jun  5 08:12 log.44871837._102183.job.log.1
[2025-06-05 08:12:59] -rw------- 1 boinc boinc       357 Jun  5 08:12 output.list
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc       620 Jun  5 08:12 runtime_log
[2025-06-05 08:12:59] -rw------- 1 boinc boinc    921600 Jun  5 08:12 result.tar.gz
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc      8953 Jun  5 08:12 runtime_log.err
[2025-06-05 08:12:59] -rw------- 1 boinc boinc       648 Jun  5 08:12 CVqLDmdCzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI0aKDmKmUEum.diag
[2025-06-05 08:12:59] -rw-rw-r-- 1 boinc boinc     21536 Jun  5 08:12 stderr.txt
[2025-06-05 08:12:59] HITS file was successfully produced:
[2025-06-05 08:12:59] -rw------- 1 boinc boinc 196641440 Jun  5 08:12 shared/HITS.pool.root.1
[2025-06-05 08:12:59]  *** Contents of shared directory: ***
[2025-06-05 08:12:59] total 412500
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:45 start_atlas.sh
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc    508875 Jun  5 06:45 input.tar.gz
[2025-06-05 08:12:59] -rw-r--r-- 2 boinc boinc 224294479 Jun  5 06:45 ATLAS.root_0
[2025-06-05 08:12:59] -rw------- 1 boinc boinc 196641440 Jun  5 08:12 HITS.pool.root.1
[2025-06-05 08:12:59] -rw------- 1 boinc boinc    921600 Jun  5 08:12 result.tar.gz
08:13:00 (2811444): run_atlas exited; CPU time 30390.421595
08:13:00 (2811444): called boinc_finish(0)

</stderr_txt>
]]>

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