Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:45 (20619): wrapper (7.7.26015): starting
00:05:45 (20619): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:05:45] Arguments: --nthreads 8
[2025-06-05 00:05:45] Threads: 8
[2025-06-05 00:05:45] Checking for CVMFS
[2025-06-05 00:05:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:05:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:05:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:05:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:05:46] 2.11.2.0 9971 33785 94324 146795 3 202 20790948 25165824 3028 130560 0 17844158 99.773 21070998 2012 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:05:46] CVMFS is ok
[2025-06-05 00:05:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:05:46] Checking for apptainer binary...
[2025-06-05 00:05:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:05:46] Running /usr/bin/apptainer --version
[2025-06-05 00:05:46] apptainer version 1.3.2-1.el7
[2025-06-05 00:05:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:05:48] cg-vwn298.simple-grid.lan
[2025-06-05 00:05:48] apptainer works
[2025-06-05 00:05:48] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:05:48] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:05:48] Starting ATLAS job with PandaID=6679585488
[2025-06-05 00:05:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:42:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:42:02] 2025-06-05 02:00:08,330 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:42:02] 2025-06-05 02:00:08,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:42:02] 2025-06-05 02:00:08,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:42:02] 2025-06-05 02:00:08,336 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:42:02] 2025-06-05 02:00:08,337 | INFO     | sum of square deviations: 3675146117.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,353 | INFO     | sum of deviations: 35584075988.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,354 | INFO     | mean x: 1749081776.5
[2025-06-05 06:42:02] 2025-06-05 02:00:08,354 | INFO     | mean y: 2451473.1754385964
[2025-06-05 06:42:02] 2025-06-05 02:00:08,354 | INFO     | -- intersect: -16932782355.02613
[2025-06-05 06:42:02] 2025-06-05 02:00:08,354 | INFO     | intersect: -16932782355.02613
[2025-06-05 06:42:02] 2025-06-05 02:00:08,355 | INFO     | chi2: 2.337384807503428
[2025-06-05 06:42:02] 2025-06-05 02:00:08,355 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,357 | INFO     | sum of deviations: 49383780248.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,357 | INFO     | mean x: 1749081624.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,357 | INFO     | mean y: 2460197.946188341
[2025-06-05 06:42:02] 2025-06-05 02:00:08,357 | INFO     | -- intersect: -25116989949.38165
[2025-06-05 06:42:02] 2025-06-05 02:00:08,358 | INFO     | intersect: -25116989949.38165
[2025-06-05 06:42:02] 2025-06-05 02:00:08,358 | INFO     | chi2: 1.5640784899834832
[2025-06-05 06:42:02] 2025-06-05 02:00:08,358 | INFO     | current chi2=1.5640784899834832 (change=33.08425360845555 %)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,359 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 06:42:02] 2025-06-05 02:00:08,360 | INFO     | sum of deviations: 47883455541.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,361 | INFO     | mean x: 1749081471.5
[2025-06-05 06:42:02] 2025-06-05 02:00:08,361 | INFO     | mean y: 2459185.9449541285
[2025-06-05 06:42:02] 2025-06-05 02:00:08,361 | INFO     | -- intersect: -26068484824.78119
[2025-06-05 06:42:02] 2025-06-05 02:00:08,361 | INFO     | intersect: -26068484824.78119
[2025-06-05 06:42:02] 2025-06-05 02:00:08,361 | INFO     | chi2: 1.5645141686158572
[2025-06-05 06:42:02] 2025-06-05 02:00:08,362 | INFO     | current chi2=1.5645141686158572 (change=-0.02785529212019518 %)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,362 | INFO     | right removable region: 217
[2025-06-05 06:42:02] 2025-06-05 02:00:08,362 | INFO     | sum of square deviations: 3438620752.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,364 | INFO     | sum of deviations: -2497505920.000002
[2025-06-05 06:42:02] 2025-06-05 02:00:08,364 | INFO     | mean x: 1749081929.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,364 | INFO     | mean y: 2475814.192825112
[2025-06-05 06:42:02] 2025-06-05 02:00:08,365 | INFO     | -- intersect: 1272852161.9484682
[2025-06-05 06:42:02] 2025-06-05 02:00:08,365 | INFO     | intersect: 1272852161.9484682
[2025-06-05 06:42:02] 2025-06-05 02:00:08,365 | INFO     | chi2: 0.796590173137914
[2025-06-05 06:42:02] 2025-06-05 02:00:08,365 | INFO     | current chi2=0.796590173137914 (change=65.91959652596717 %)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,366 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 06:42:02] 2025-06-05 02:00:08,367 | INFO     | sum of deviations: -4987473764.999998
[2025-06-05 06:42:02] 2025-06-05 02:00:08,368 | INFO     | mean x: 1749082081.5
[2025-06-05 06:42:02] 2025-06-05 02:00:08,368 | INFO     | mean y: 2477491.908256881
[2025-06-05 06:42:02] 2025-06-05 02:00:08,368 | INFO     | -- intersect: 2717991507.3669796
[2025-06-05 06:42:02] 2025-06-05 02:00:08,368 | INFO     | intersect: 2717991507.3669796
[2025-06-05 06:42:02] 2025-06-05 02:00:08,368 | INFO     | chi2: 0.7932989918033826
[2025-06-05 06:42:02] 2025-06-05 02:00:08,369 | INFO     | current chi2=0.7932989918033826 (change=0.4131586662143811 %)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,369 | INFO     | left removable region: 20
[2025-06-05 06:42:02] 2025-06-05 02:00:08,369 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,371 | INFO     | sum of deviations: 5646673010.000006
[2025-06-05 06:42:02] 2025-06-05 02:00:08,371 | INFO     | mean x: 1749082051.0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,378 | INFO     | mean y: 2488948.502538071
[2025-06-05 06:42:02] 2025-06-05 02:00:08,378 | INFO     | -- intersect: -4163680314.712676
[2025-06-05 06:42:02] 2025-06-05 02:00:08,379 | INFO     | intersect: -4163680314.712676
[2025-06-05 06:42:02] 2025-06-05 02:00:08,379 | INFO     | chi2: 0.00022591566786752832
[2025-06-05 06:42:02] 2025-06-05 02:00:08,379 | INFO     | -- intersect: -4163680314.712676
[2025-06-05 06:42:02] 2025-06-05 02:00:08,379 | INFO     | current memory leak: 2.38 B/s (using 197 data points, chi2=0.00)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,380 | INFO     | ..............................
[2025-06-05 06:42:02] 2025-06-05 02:00:08,380 | INFO     | . Timing measurements:
[2025-06-05 06:42:02] 2025-06-05 02:00:08,380 | INFO     | . get job = 0 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,380 | INFO     | . initial setup = 2 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | . payload setup = 33 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | . stage-in = 0 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | . payload execution = 13888 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | . stage-out = 3 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | . log creation = 1 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,381 | INFO     | ..............................
[2025-06-05 06:42:02] 2025-06-05 02:00:08,964 | INFO     | 
[2025-06-05 06:42:02] 2025-06-05 02:00:08,964 | INFO     | job summary report
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | --------------------------------------------------
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | PanDA job id: 6679585488
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | task id: 45006595
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | errors: (none)
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | pilot state: finished 
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | transexitcode: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | exeerrorcode: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | exeerrordiag: 
[2025-06-05 06:42:02] 2025-06-05 02:00:08,965 | INFO     | exitcode: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | exitmsg: OK
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | cpuconsumptiontime: 52400 s
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | nevents: 400
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | neventsw: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | pid: 9095
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | pgrp: 9095
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | corecount: 8
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | event service: False
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | sizes: {0: 2397120, 1: 2397319, 9: 2397525, 12: 2397553, 13926: 2427299, 13930: 2436424, 14021: 2436538}
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | --------------------------------------------------
[2025-06-05 06:42:02] 2025-06-05 02:00:08,966 | INFO     | 
[2025-06-05 06:42:02] 2025-06-05 02:00:08,967 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:42:02] 2025-06-05 02:00:09,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:42:02] 2025-06-05 02:00:09,508 | INFO     | job 6679585488 has completed (purged errors)
[2025-06-05 06:42:02] 2025-06-05 02:00:09,508 | INFO     | overall cleanup function is called
[2025-06-05 06:42:02] 2025-06-05 02:00:10,517 | INFO     | --- collectZombieJob: --- 10, [9095]
[2025-06-05 06:42:02] 2025-06-05 02:00:10,517 | INFO     | zombie collector waiting for pid 9095
[2025-06-05 06:42:02] 2025-06-05 02:00:10,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:42:02] 2025-06-05 02:00:10,518 | INFO     | collected zombie processes
[2025-06-05 06:42:02] 2025-06-05 02:00:10,518 | INFO     | will attempt to kill all subprocesses of pid=9095
[2025-06-05 06:42:02] 2025-06-05 02:00:10,680 | INFO     | process IDs to be killed: [9095] (in reverse order)
[2025-06-05 06:42:02] 2025-06-05 02:00:11,429 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:42:02] 2025-06-05 02:00:11,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:42:02] 2025-06-05 02:00:11,433 | INFO     | did not find any defunct processes belonging to 9095
[2025-06-05 06:42:02] 2025-06-05 02:00:11,436 | INFO     | did not find any defunct processes belonging to 9095
[2025-06-05 06:42:02] 2025-06-05 02:00:11,436 | INFO     | ready for new job
[2025-06-05 06:42:02] 2025-06-05 02:00:11,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:42:02] 2025-06-05 02:00:11,439 | INFO     | **************************************
[2025-06-05 06:42:02] 2025-06-05 02:00:11,439 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:42:02] 2025-06-05 02:00:11,439 | INFO     | **************************************
[2025-06-05 06:42:02] 2025-06-05 02:00:11,439 | INFO     | 
[2025-06-05 06:42:02] 2025-06-05 02:00:11,440 | INFO     | pilot is running in a VM
[2025-06-05 06:42:02] 2025-06-05 02:00:11,440 | INFO     | architecture information:
[2025-06-05 06:42:02] 2025-06-05 02:00:11,452 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:42:02] 2025-06-05 02:00:11,693 | INFO     | cat /etc/os-release:
[2025-06-05 06:42:02] NAME="CentOS Linux"
[2025-06-05 06:42:02] VERSION="7 (Core)"
[2025-06-05 06:42:02] ID="centos"
[2025-06-05 06:42:02] ID_LIKE="rhel fedora"
[2025-06-05 06:42:02] VERSION_ID="7"
[2025-06-05 06:42:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:42:02] ANSI_COLOR="0;31"
[2025-06-05 06:42:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:42:02] HOME_URL="https://www.centos.org/"
[2025-06-05 06:42:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:42:02] 
[2025-06-05 06:42:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:42:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:42:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:42:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:42:02] 
[2025-06-05 06:42:02] 2025-06-05 02:00:11,693 | INFO     | **************************************
[2025-06-05 06:42:02] 2025-06-05 02:00:12,196 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 06:42:02] 2025-06-05 02:00:12,409 | INFO     | sufficient remaining disk space (497367908352 B)
[2025-06-05 06:42:02] 2025-06-05 02:00:12,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:42:02] 2025-06-05 02:00:12,409 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:42:02] 2025-06-05 02:00:12,410 | INFO     | update_server=False
[2025-06-05 06:42:02] 2025-06-05 02:00:12,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:42:02] 2025-06-05 02:00:12,413 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:42:02] 2025-06-05 02:00:12,414 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:42:02] 2025-06-05 02:00:12,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:42:02] 2025-06-05 02:00:12,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:42:02] 2025-06-05 02:00:12,770 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:42:02] 2025-06-05 02:00:12,770 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:42:02] 2025-06-05 02:00:12,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:02] 2025-06-05 02:00:12,771 | INFO     | will abort loop
[2025-06-05 06:42:02] 2025-06-05 02:00:12,839 | INFO     | all job control threads have been joined
[2025-06-05 06:42:02] 2025-06-05 02:00:13,232 | INFO     | all data control threads have been joined
[2025-06-05 06:42:02] 2025-06-05 02:00:13,358 | INFO     | all payload control threads have been joined
[2025-06-05 06:42:02] 2025-06-05 02:00:13,415 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:13,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:02] 2025-06-05 02:00:13,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:42:02] 2025-06-05 02:00:13,776 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:13,809 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:13,830 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:13,843 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:13,845 | INFO     | [job] control thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,167 | INFO     | [job] validate thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,169 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:42:02] 2025-06-05 02:00:14,238 | INFO     | [data] control thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,364 | INFO     | [payload] control thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,508 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,550 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:14,553 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:15,689 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:18,230 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:42:02] 2025-06-05 02:00:18,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589289342784)>', '<ExcThread(monitor, started 140588624107264)>']
[2025-06-05 06:42:02] 2025-06-05 02:00:18,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:42:02] 2025-06-05 02:00:18,451 | INFO     | [monitor] control thread has ended
[2025-06-05 06:42:02] 2025-06-05 02:00:23,331 | INFO     | all workflow threads have been joined
[2025-06-05 06:42:02] 2025-06-05 02:00:23,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:42:02] 2025-06-05 02:00:23,332 | INFO     | traces error code: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:23,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:42:02] 2025-06-05 02:00:23,601 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:42:02] 2025-06-05 02:00:23,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:42:02] 2025-06-05 02:00:23,612 [wrapper] pilotpid: 24268
[2025-06-05 06:42:02] 2025-06-05 02:00:23,615 [wrapper] Pilot exit status: 0
[2025-06-05 06:42:02] 2025-06-05 02:00:23,652 [wrapper] pandaids: 6679585488
[2025-06-05 06:42:02] 2025-06-05 02:00:23,701 [wrapper] cleanup supervisor_pilot 30916 24269
[2025-06-05 06:42:02] 2025-06-05 02:00:23,711 [wrapper] Test setup, not cleaning
[2025-06-05 06:42:02] 2025-06-05 02:00:23,718 [wrapper] apfmon messages muted
[2025-06-05 06:42:02] 2025-06-05 02:00:23,729 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:42:02] 2025-06-05 02:00:23,736 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:42:02]  *** Error codes and diagnostics ***
[2025-06-05 06:42:02]     "exeErrorCode": 0,
[2025-06-05 06:42:02]     "exeErrorDiag": "",
[2025-06-05 06:42:02]     "pilotErrorCode": 0,
[2025-06-05 06:42:02]     "pilotErrorDiag": "",
[2025-06-05 06:42:02]  *** Listing of results directory ***
[2025-06-05 06:42:02] total 396964
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc      5111 Jun  4 11:20 queuedata.json
[2025-06-05 06:42:02] -rwx------. 1 boinc boinc     37140 Jun  4 11:23 runpilot2-wrapper.sh
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:42:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:05 run_atlas
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:05 job.xml
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc      6390 Jun  5 00:05 init_data.xml
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc 215525378 Jun  5 00:05 EVNT.45006593._001949.pool.root.1
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:05 start_atlas.sh
[2025-06-05 06:42:02] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:05 shared
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc    508886 Jun  5 00:05 input.tar.gz
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:05 boinc_lockfile
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc      2524 Jun  5 00:05 pandaJob.out
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc    987032 Jun  5 00:06 agis_schedconf.cvmfs.json
[2025-06-05 06:42:02] drwx------. 4 boinc boinc      4096 Jun  5 00:06 pilot3
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc 183920396 Jun  5 03:57 HITS.45006595._056494.pool.root.1
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc       530 Jun  5 03:57 boinc_task_state.xml
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc      1017 Jun  5 03:58 memory_monitor_summary.json
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc   1598969 Jun  5 03:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc    396411 Jun  5 03:58 log.45006595._056494.job.log.tgz.1
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc        95 Jun  5 03:59 pilot_heartbeat.json
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc      7688 Jun  5 04:00 heartbeat.json
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc      4725 Jun  5 04:00 pilotlog.txt
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc   1218286 Jun  5 04:00 log.45006595._056494.job.log.1
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc       357 Jun  5 04:00 output.list
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc       620 Jun  5 04:00 runtime_log
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc   1638400 Jun  5 04:00 result.tar.gz
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc      8659 Jun  5 04:00 runtime_log.err
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc       656 Jun  5 04:00 fBjMDmFWzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXxnKDmaxsUHo.diag
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:42 boinc_mmap_file
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:42 wrapper_checkpoint.txt
[2025-06-05 06:42:02] -rw-r--r--. 1 boinc boinc     20467 Jun  5 06:42 stderr.txt
[2025-06-05 06:42:02] HITS file was successfully produced:
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc 183920396 Jun  5 03:57 shared/HITS.pool.root.1
[2025-06-05 06:42:02]  *** Contents of shared directory: ***
[2025-06-05 06:42:02] total 392204
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc 215525378 Jun  5 00:05 ATLAS.root_0
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:05 start_atlas.sh
[2025-06-05 06:42:02] -rw-r--r--. 2 boinc boinc    508886 Jun  5 00:05 input.tar.gz
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc 183920396 Jun  5 03:57 HITS.pool.root.1
[2025-06-05 06:42:02] -rw-------. 1 boinc boinc   1638400 Jun  5 04:00 result.tar.gz
06:42:04 (20619): run_atlas exited; CPU time 52577.416654
06:42:04 (20619): called boinc_finish(0)

</stderr_txt>
]]>

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