Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:02:03 (3904982): wrapper (7.7.26015): starting
10:02:03 (3904982): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:02:03] Arguments: --nthreads 8
[2025-06-04 10:02:03] Threads: 8
[2025-06-04 10:02:03] Checking for CVMFS
[2025-06-04 10:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:02:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:02:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:02:04] 2.12.6.0 9081 31594 553684 146781 1 422 16591670 32935936 13301 16776704 0 179920883 99.655 159309362 25920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:02:04] CVMFS is ok
[2025-06-04 10:02:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:02:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:02:04] Further information can be found at the LHC@home message board.
[2025-06-04 10:02:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:02:04] Checking for apptainer binary...
[2025-06-04 10:02:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:02:04] Running /usr/bin/apptainer --version
[2025-06-04 10:02:04] apptainer version 1.4.1-1.el9
[2025-06-04 10:02:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:02:04] c6-12-29-3.aglt2.org
[2025-06-04 10:02:04] apptainer works
[2025-06-04 10:02:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:02:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:02:04] Starting ATLAS job with PandaID=6679293893
[2025-06-04 10:02:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:06:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:06:23]  mtime=0
[2025-06-04 11:06:23]  protocol_id=None
[2025-06-04 11:06:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:06:23]  replicas=None
[2025-06-04 11:06:23]  scope=mc23_13p6TeV
[2025-06-04 11:06:23]  status=None
[2025-06-04 11:06:23]  status_code=0
[2025-06-04 11:06:23]  storage_token=
[2025-06-04 11:06:23]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679293893/log.45006595._056117.job.log.tgz.1
[2025-06-04 11:06:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/20/log.45006595._056117.job.log.tgz.1
[2025-06-04 11:06:23]  workdir=None
[2025-06-04 11:06:23] ]
[2025-06-04 11:06:23] 2025-06-04 15:05:53,492 | INFO     | transferring file log.45006595._056117.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679293893/log.45006595._056117.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:06:23] 2025-06-04 15:05:53,493 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679293893/log.45006595._056117.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056117.job
[2025-06-04 11:06:23] 2025-06-04 15:05:53,512 | INFO     | adding to output.list: log.45006595._056117.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/20/log.45006595._056117.job.log.tg
[2025-06-04 11:06:23] 2025-06-04 15:05:53,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:06:23] 2025-06-04 15:05:53,513 | INFO     | summary of transferred files:
[2025-06-04 11:06:23] 2025-06-04 15:05:53,513 | INFO     |  -- lfn=log.45006595._056117.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:06:23] 2025-06-04 15:05:53,513 | INFO     | stage-out finished correctly
[2025-06-04 11:06:23] 2025-06-04 15:05:55,542 | INFO     | monitor loop #285: job 0:6679293893 is in state 'finished'
[2025-06-04 11:06:23] 2025-06-04 15:05:55,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:23] 2025-06-04 15:05:56,069 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:06:23] 2025-06-04 15:05:58,046 | INFO     | monitor loop #286: job 0:6679293893 is in state 'finished'
[2025-06-04 11:06:23] 2025-06-04 15:05:58,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:23] 2025-06-04 15:05:58,819 | INFO     | job 6679293893 has state=finished
[2025-06-04 11:06:23] 2025-06-04 15:05:58,820 | INFO     | preparing for final server update for job 6679293893 in state='finished'
[2025-06-04 11:06:23] 2025-06-04 15:05:58,820 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:06:23] 2025-06-04 15:05:58,820 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:06:23] 2025-06-04 15:05:58,821 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:06:23] 2025-06-04 15:05:58,821 | INFO     | job 6679293893 has finished - writing final server update
[2025-06-04 11:06:23] 2025-06-04 15:05:58,821 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:06:23] 2025-06-04 15:05:58,839 | INFO     | executing command: lscpu
[2025-06-04 11:06:23] 2025-06-04 15:05:58,925 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:06:23] 2025-06-04 15:06:00,549 | INFO     | monitor loop #287: job 0:6679293893 is in state 'finished'
[2025-06-04 11:06:23] 2025-06-04 15:06:00,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,053 | INFO     | monitor loop #288: job 0:6679293893 is in state 'finished'
[2025-06-04 11:06:23] 2025-06-04 15:06:03,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,264 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:06:23] 2025-06-04 15:06:03,265 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679293893/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,267 | INFO     | extracted standard info from prmon json
[2025-06-04 11:06:23] 2025-06-04 15:06:03,267 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:06:23] 2025-06-04 15:06:03,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:06:23] 2025-06-04 15:06:03,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:06:23] 2025-06-04 15:06:03,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:06:23] 2025-06-04 15:06:03,270 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:06:23] 2025-06-04 15:06:03,271 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 11:06:23] 2025-06-04 15:06:03,271 | INFO     | sum of deviations: 5430800994.500001
[2025-06-04 11:06:23] 2025-06-04 15:06:03,271 | INFO     | mean x: 1749047744.5
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | mean y: 2171137.4464285714
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | -- intersect: -174484218854.6342
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | intersect: -174484218854.6342
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | chi2: 0.8591880993756458
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | -- intersect: -174484218854.6342
[2025-06-04 11:06:23] 2025-06-04 15:06:03,272 | INFO     | current memory leak: 99.76 B/s (using 56 data points, chi2=0.86)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | ..............................
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . Timing measurements:
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . get job = 0 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . initial setup = 2 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . payload setup = 6 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . stage-in = 0 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . payload execution = 3791 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . stage-out = 0 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | . log creation = 0 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,273 | INFO     | ..............................
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | 
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | job summary report
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | --------------------------------------------------
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | PanDA job id: 6679293893
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | task id: 45006595
[2025-06-04 11:06:23] 2025-06-04 15:06:03,328 | INFO     | errors: (none)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | pilot state: finished 
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | transexitcode: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | exeerrorcode: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | exeerrordiag: 
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | exitcode: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | exitmsg: OK
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | cpuconsumptiontime: 25344 s
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | nevents: 400
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | neventsw: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | pid: 3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | pgrp: 3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | corecount: 8
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | event service: False
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | sizes: {0: 2397115, 1: 2397314, 5: 2397520, 11: 2397576, 3801: 2423286, 3802: 2432227, 3805: 2432411, 3812: 2432581}
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | --------------------------------------------------
[2025-06-04 11:06:23] 2025-06-04 15:06:03,329 | INFO     | 
[2025-06-04 11:06:23] 2025-06-04 15:06:03,330 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | job 6679293893 has completed (purged errors)
[2025-06-04 11:06:23] 2025-06-04 15:06:03,351 | INFO     | overall cleanup function is called
[2025-06-04 11:06:23] 2025-06-04 15:06:04,358 | INFO     | --- collectZombieJob: --- 10, [3915666]
[2025-06-04 11:06:23] 2025-06-04 15:06:04,359 | INFO     | zombie collector waiting for pid 3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:04,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:06:23] 2025-06-04 15:06:04,359 | INFO     | collected zombie processes
[2025-06-04 11:06:23] 2025-06-04 15:06:04,359 | INFO     | will attempt to kill all subprocesses of pid=3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:04,546 | INFO     | process IDs to be killed: [3915666] (in reverse order)
[2025-06-04 11:06:23] 2025-06-04 15:06:04,616 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:06:23] 2025-06-04 15:06:04,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:06:23] 2025-06-04 15:06:04,631 | INFO     | did not find any defunct processes belonging to 3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:04,640 | INFO     | did not find any defunct processes belonging to 3915666
[2025-06-04 11:06:23] 2025-06-04 15:06:04,640 | INFO     | ready for new job
[2025-06-04 11:06:23] 2025-06-04 15:06:04,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:06:23] 2025-06-04 15:06:04,642 | INFO     | **************************************
[2025-06-04 11:06:23] 2025-06-04 15:06:04,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:06:23] 2025-06-04 15:06:04,642 | INFO     | **************************************
[2025-06-04 11:06:23] 2025-06-04 15:06:04,642 | INFO     | 
[2025-06-04 11:06:23] 2025-06-04 15:06:04,657 | INFO     | architecture information:
[2025-06-04 11:06:23] 2025-06-04 15:06:04,657 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:06:23] 2025-06-04 15:06:04,670 | INFO     | cat /etc/os-release:
[2025-06-04 11:06:23] NAME="CentOS Linux"
[2025-06-04 11:06:23] VERSION="7 (Core)"
[2025-06-04 11:06:23] ID="centos"
[2025-06-04 11:06:23] ID_LIKE="rhel fedora"
[2025-06-04 11:06:23] VERSION_ID="7"
[2025-06-04 11:06:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:06:23] ANSI_COLOR="0;31"
[2025-06-04 11:06:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:06:23] HOME_URL="https://www.centos.org/"
[2025-06-04 11:06:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:06:23] 
[2025-06-04 11:06:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:06:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:06:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:06:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:06:23] 
[2025-06-04 11:06:23] 2025-06-04 15:06:04,670 | INFO     | **************************************
[2025-06-04 11:06:23] 2025-06-04 15:06:05,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:06:23] 2025-06-04 15:06:05,193 | INFO     | sufficient remaining disk space (96640958464 B)
[2025-06-04 11:06:23] 2025-06-04 15:06:05,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:06:23] 2025-06-04 15:06:05,194 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:06:23] 2025-06-04 15:06:05,194 | INFO     | update_server=False
[2025-06-04 11:06:23] 2025-06-04 15:06:05,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:06:23] 2025-06-04 15:06:05,195 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:06:23] 2025-06-04 15:06:05,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:23] 2025-06-04 15:06:05,196 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:06:23] 2025-06-04 15:06:05,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:06:23] 2025-06-04 15:06:05,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:06:23] 2025-06-04 15:06:05,409 | INFO     | all payload control threads have been joined
[2025-06-04 11:06:23] 2025-06-04 15:06:05,556 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:06:23] 2025-06-04 15:06:05,557 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:06:23] 2025-06-04 15:06:05,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:23] 2025-06-04 15:06:05,557 | INFO     | will abort loop
[2025-06-04 11:06:23] 2025-06-04 15:06:05,837 | INFO     | all data control threads have been joined
[2025-06-04 11:06:23] 2025-06-04 15:06:06,200 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,201 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,219 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,415 | INFO     | [payload] control thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,558 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:06:23] 2025-06-04 15:06:06,585 | INFO     | [job] validate thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:06:23] 2025-06-04 15:06:06,676 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,708 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,709 | INFO     | all job control threads have been joined
[2025-06-04 11:06:23] 2025-06-04 15:06:06,842 | INFO     | [data] control thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:06,865 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:07,022 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:07,275 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:07,713 | INFO     | [job] control thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:08,583 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:10,644 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:15,722 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:06:23] 2025-06-04 15:06:16,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:06:23] 2025-06-04 15:06:18,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001581647680)>', '<ExcThread(monitor, started 140000934999808)>']
[2025-06-04 11:06:23] 2025-06-04 15:06:19,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:06:23] 2025-06-04 15:06:19,254 | INFO     | [monitor] control thread has ended
[2025-06-04 11:06:23] 2025-06-04 15:06:23,524 | INFO     | all workflow threads have been joined
[2025-06-04 11:06:23] 2025-06-04 15:06:23,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:06:23] 2025-06-04 15:06:23,524 | INFO     | traces error code: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:23,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:06:23] 2025-06-04 15:06:23,646 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:06:23] 2025-06-04 15:06:23,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:06:23] 2025-06-04 15:06:23,653 [wrapper] pilotpid: 3908607
[2025-06-04 11:06:23] 2025-06-04 15:06:23,656 [wrapper] Pilot exit status: 0
[2025-06-04 11:06:23] 2025-06-04 15:06:23,667 [wrapper] pandaids: 6679293893
[2025-06-04 11:06:23] 2025-06-04 15:06:23,717 [wrapper] cleanup supervisor_pilot 4117645 3908608
[2025-06-04 11:06:23] 2025-06-04 15:06:23,721 [wrapper] Test setup, not cleaning
[2025-06-04 11:06:23] 2025-06-04 15:06:23,724 [wrapper] apfmon messages muted
[2025-06-04 11:06:23] 2025-06-04 15:06:23,728 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:06:23] 2025-06-04 15:06:23,731 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:06:23]  *** Error codes and diagnostics ***
[2025-06-04 11:06:23]     "exeErrorCode": 0,
[2025-06-04 11:06:23]     "exeErrorDiag": "",
[2025-06-04 11:06:23]     "pilotErrorCode": 0,
[2025-06-04 11:06:23]     "pilotErrorDiag": "",
[2025-06-04 11:06:23]  *** Listing of results directory ***
[2025-06-04 11:06:23] total 389048
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 11:06:23] -rwx------. 1 boincer umatlas     37140 Jun  4 04:57 runpilot2-wrapper.sh
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:06:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:02 run_atlas
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:02 job.xml
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas 212851477 Jun  4 10:02 EVNT.45006593._000113.pool.root.1
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 11:06:23] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:02 shared
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 10:02 input.tar.gz
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:02 boinc_lockfile
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 10:02 pandaJob.out
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas    986819 Jun  4 10:02 agis_schedconf.cvmfs.json
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:06:23] drwx------. 4 boincer umatlas      4096 Jun  4 10:02 pilot3
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 11:01 init_data.xml
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas 180325172 Jun  4 11:05 HITS.45006595._056117.pool.root.1
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas       530 Jun  4 11:05 boinc_task_state.xml
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas        95 Jun  4 11:05 pilot_heartbeat.json
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas      1041 Jun  4 11:05 memory_monitor_summary.json
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas    299675 Jun  4 11:05 log.45006595._056117.job.log.tgz.1
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas      7724 Jun  4 11:06 heartbeat.json
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:06 wrapper_checkpoint.txt
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:06 boinc_mmap_file
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas      4734 Jun  4 11:06 pilotlog.txt
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas    385351 Jun  4 11:06 log.45006595._056117.job.log.1
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas       357 Jun  4 11:06 output.list
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:06 runtime_log
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas    706560 Jun  4 11:06 result.tar.gz
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas       653 Jun  4 11:06 V6wMDmU7yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmisnKDmlHpsSn.diag
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 11:06 runtime_log.err
[2025-06-04 11:06:23] -rw-r--r--. 1 boincer umatlas     21650 Jun  4 11:06 stderr.txt
[2025-06-04 11:06:23] HITS file was successfully produced:
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas 180325172 Jun  4 11:05 shared/HITS.pool.root.1
[2025-06-04 11:06:23]  *** Contents of shared directory: ***
[2025-06-04 11:06:23] total 385180
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas 212851477 Jun  4 10:02 ATLAS.root_0
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 11:06:23] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 10:02 input.tar.gz
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas 180325172 Jun  4 11:05 HITS.pool.root.1
[2025-06-04 11:06:23] -rw-------. 1 boincer umatlas    706560 Jun  4 11:06 result.tar.gz
11:06:25 (3904982): run_atlas exited; CPU time 25478.281920
11:06:25 (3904982): called boinc_finish(0)

</stderr_txt>
]]>

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