Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:06:18 (25684): wrapper (7.7.26015): starting
01:06:18 (25684): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:06:18] Arguments: --nthreads 8
[2025-06-05 01:06:18] Threads: 8
[2025-06-05 01:06:18] Checking for CVMFS
[2025-06-05 01:06:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:06:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:06:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:06:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:06:21] 2.11.2.0 23601 33861 96764 146797 3 59 22723369 25165825 4686 130560 0 17898941 99.805 19773052 2146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:06:21] CVMFS is ok
[2025-06-05 01:06:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:06:21] Checking for apptainer binary...
[2025-06-05 01:06:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:06:21] Running /usr/bin/apptainer --version
[2025-06-05 01:06:21] apptainer version 1.3.2-1.el7
[2025-06-05 01:06:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:06:27] cg-vwn275.simple-grid.lan
[2025-06-05 01:06:27] apptainer works
[2025-06-05 01:06:27] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:06:27] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:06:27] Starting ATLAS job with PandaID=6667923392
[2025-06-05 01:06:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:28:52]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:28:52] 2025-06-05 04:25:13,355 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:28:52] 2025-06-05 04:25:13,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:28:52] 2025-06-05 04:25:13,355 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:28:52] 2025-06-05 04:25:13,355 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:28:52] 2025-06-05 04:25:13,364 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:28:52] 2025-06-05 04:25:13,367 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,370 | INFO     | sum of deviations: 62672699422.000015
[2025-06-05 06:28:52] 2025-06-05 04:25:13,370 | INFO     | mean x: 1749088230.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,370 | INFO     | mean y: 2476662.395348837
[2025-06-05 06:28:52] 2025-06-05 04:25:13,371 | INFO     | -- intersect: -12960866001.200762
[2025-06-05 06:28:52] 2025-06-05 04:25:13,371 | INFO     | intersect: -12960866001.200762
[2025-06-05 06:28:52] 2025-06-05 04:25:13,371 | INFO     | chi2: 7.131377826989825
[2025-06-05 06:28:52] 2025-06-05 04:25:13,372 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,374 | INFO     | sum of deviations: 81496024278.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,374 | INFO     | mean x: 1749088077.5
[2025-06-05 06:28:52] 2025-06-05 04:25:13,374 | INFO     | mean y: 2483489.5135135134
[2025-06-05 06:28:52] 2025-06-05 04:25:13,375 | INFO     | -- intersect: -17723057614.07249
[2025-06-05 06:28:52] 2025-06-05 04:25:13,375 | INFO     | intersect: -17723057614.07249
[2025-06-05 06:28:52] 2025-06-05 04:25:13,375 | INFO     | chi2: 6.413040889499942
[2025-06-05 06:28:52] 2025-06-05 04:25:13,375 | INFO     | current chi2=6.413040889499942 (change=10.072905333541906 %)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,375 | INFO     | right removable region: 295
[2025-06-05 06:28:52] 2025-06-05 04:25:13,376 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,378 | INFO     | sum of deviations: -41534603540.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,378 | INFO     | mean x: 1749088382.5
[2025-06-05 06:28:52] 2025-06-05 04:25:13,378 | INFO     | mean y: 2514981.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,379 | INFO     | -- intersect: 9036372241.792414
[2025-06-05 06:28:52] 2025-06-05 04:25:13,379 | INFO     | intersect: 9036372241.792414
[2025-06-05 06:28:52] 2025-06-05 04:25:13,379 | INFO     | chi2: 2.485993268691083
[2025-06-05 06:28:52] 2025-06-05 04:25:13,379 | INFO     | current chi2=2.485993268691083 (change=65.1400706987863 %)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,380 | INFO     | sum of square deviations: 7641036290.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,383 | INFO     | sum of deviations: -93115984915.99998
[2025-06-05 06:28:52] 2025-06-05 04:25:13,383 | INFO     | mean x: 1749088535.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,383 | INFO     | mean y: 2534516.443298969
[2025-06-05 06:28:52] 2025-06-05 04:25:13,383 | INFO     | -- intersect: 21317457710.167393
[2025-06-05 06:28:52] 2025-06-05 04:25:13,383 | INFO     | intersect: 21317457710.167393
[2025-06-05 06:28:52] 2025-06-05 04:25:13,384 | INFO     | chi2: 1.0753585673061545
[2025-06-05 06:28:52] 2025-06-05 04:25:13,384 | INFO     | current chi2=1.0753585673061545 (change=56.743303336764505 %)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,384 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 06:28:52] 2025-06-05 04:25:13,387 | INFO     | sum of deviations: -96307670408.99995
[2025-06-05 06:28:52] 2025-06-05 04:25:13,388 | INFO     | mean x: 1749088687.5
[2025-06-05 06:28:52] 2025-06-05 04:25:13,388 | INFO     | mean y: 2535758.041958042
[2025-06-05 06:28:52] 2025-06-05 04:25:13,388 | INFO     | -- intersect: 23224635971.61008
[2025-06-05 06:28:52] 2025-06-05 04:25:13,388 | INFO     | intersect: 23224635971.61008
[2025-06-05 06:28:52] 2025-06-05 04:25:13,388 | INFO     | chi2: 1.0448035424065725
[2025-06-05 06:28:52] 2025-06-05 04:25:13,389 | INFO     | current chi2=1.0448035424065725 (change=2.841380152494107 %)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,389 | INFO     | left removable region: 30
[2025-06-05 06:28:52] 2025-06-05 04:25:13,389 | INFO     | sum of square deviations: 5770452380.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,391 | INFO     | sum of deviations: -49459937283.99999
[2025-06-05 06:28:52] 2025-06-05 04:25:13,392 | INFO     | mean x: 1749088962.0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,392 | INFO     | mean y: 2532517.041509434
[2025-06-05 06:28:52] 2025-06-05 04:25:13,392 | INFO     | -- intersect: 14994395315.267504
[2025-06-05 06:28:52] 2025-06-05 04:25:13,392 | INFO     | intersect: 14994395315.267504
[2025-06-05 06:28:52] 2025-06-05 04:25:13,393 | INFO     | chi2: 0.22257160424133363
[2025-06-05 06:28:52] 2025-06-05 04:25:13,393 | INFO     | -- intersect: 14994395315.267504
[2025-06-05 06:28:52] 2025-06-05 04:25:13,393 | INFO     | current memory leak: -8.57 B/s (using 265 data points, chi2=0.22)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,394 | INFO     | ..............................
[2025-06-05 06:28:52] 2025-06-05 04:25:13,394 | INFO     | . Timing measurements:
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . get job = 0 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . initial setup = 8 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . payload setup = 171 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . stage-in = 0 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . payload execution = 18484 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . stage-out = 6 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | . log creation = 1 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,395 | INFO     | ..............................
[2025-06-05 06:28:52] 2025-06-05 04:25:13,518 | INFO     | 
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | job summary report
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | --------------------------------------------------
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | PanDA job id: 6667923392
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | task id: 44871837
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | errors: (none)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | pilot state: finished 
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | transexitcode: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | exeerrorcode: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | exeerrordiag: 
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | exitcode: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,519 | INFO     | exitmsg: OK
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | cpuconsumptiontime: 69761 s
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | nevents: 400
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | neventsw: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | pid: 5572
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | pgrp: 5572
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | corecount: 8
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | event service: False
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397448, 24: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 67: 2397744, 77: 2397772, 87: 2398034, 88: 2398342, 18
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | --------------------------------------------------
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | 
[2025-06-05 06:28:52] 2025-06-05 04:25:13,520 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-05 06:28:52] 2025-06-05 04:25:13,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | job 6667923392 has completed (purged errors)
[2025-06-05 06:28:52] 2025-06-05 04:25:13,890 | INFO     | overall cleanup function is called
[2025-06-05 06:28:52] 2025-06-05 04:25:14,899 | INFO     | --- collectZombieJob: --- 10, [5572]
[2025-06-05 06:28:52] 2025-06-05 04:25:14,900 | INFO     | zombie collector waiting for pid 5572
[2025-06-05 06:28:52] 2025-06-05 04:25:14,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:28:52] 2025-06-05 04:25:14,900 | INFO     | collected zombie processes
[2025-06-05 06:28:52] 2025-06-05 04:25:14,900 | INFO     | will attempt to kill all subprocesses of pid=5572
[2025-06-05 06:28:52] 2025-06-05 04:25:15,055 | INFO     | process IDs to be killed: [5572] (in reverse order)
[2025-06-05 06:28:52] 2025-06-05 04:25:15,696 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:28:52] 2025-06-05 04:25:15,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:28:52] 2025-06-05 04:25:15,703 | INFO     | did not find any defunct processes belonging to 5572
[2025-06-05 06:28:52] 2025-06-05 04:25:15,706 | INFO     | did not find any defunct processes belonging to 5572
[2025-06-05 06:28:52] 2025-06-05 04:25:15,707 | INFO     | ready for new job
[2025-06-05 06:28:52] 2025-06-05 04:25:15,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:28:52] 2025-06-05 04:25:15,709 | INFO     | **************************************
[2025-06-05 06:28:52] 2025-06-05 04:25:15,710 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:28:52] 2025-06-05 04:25:15,710 | INFO     | **************************************
[2025-06-05 06:28:52] 2025-06-05 04:25:15,710 | INFO     | 
[2025-06-05 06:28:52] 2025-06-05 04:25:15,714 | INFO     | pilot is running in a VM
[2025-06-05 06:28:52] 2025-06-05 04:25:15,714 | INFO     | architecture information:
[2025-06-05 06:28:52] 2025-06-05 04:25:15,724 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:28:52] 2025-06-05 04:25:15,891 | INFO     | cat /etc/os-release:
[2025-06-05 06:28:52] NAME="CentOS Linux"
[2025-06-05 06:28:52] VERSION="7 (Core)"
[2025-06-05 06:28:52] ID="centos"
[2025-06-05 06:28:52] ID_LIKE="rhel fedora"
[2025-06-05 06:28:52] VERSION_ID="7"
[2025-06-05 06:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:28:52] ANSI_COLOR="0;31"
[2025-06-05 06:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:28:52] HOME_URL="https://www.centos.org/"
[2025-06-05 06:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:28:52] 
[2025-06-05 06:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:28:52] 
[2025-06-05 06:28:52] 2025-06-05 04:25:15,891 | INFO     | **************************************
[2025-06-05 06:28:52] 2025-06-05 04:25:16,395 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-05 06:28:52] 2025-06-05 04:25:16,679 | INFO     | sufficient remaining disk space (496877174784 B)
[2025-06-05 06:28:52] 2025-06-05 04:25:16,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:28:52] 2025-06-05 04:25:16,679 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:28:52] 2025-06-05 04:25:16,680 | INFO     | update_server=False
[2025-06-05 06:28:52] 2025-06-05 04:25:16,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:28:52] 2025-06-05 04:25:16,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:28:52] 2025-06-05 04:25:16,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:28:52] 2025-06-05 04:25:16,682 | INFO     | aborting loop
[2025-06-05 06:28:52] 2025-06-05 04:25:16,775 | INFO     | all payload control threads have been joined
[2025-06-05 06:28:52] 2025-06-05 04:25:16,807 | INFO     | PID=29967 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 06:28:52] 2025-06-05 04:25:16,811 | INFO     | .. there are 9 such processes running
[2025-06-05 06:28:52] 2025-06-05 04:25:16,813 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:28:52] 2025-06-05 04:25:16,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:28:52] 2025-06-05 04:25:16,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:28:52] 2025-06-05 04:25:17,218 | INFO     | all job control threads have been joined
[2025-06-05 06:28:52] 2025-06-05 04:25:17,685 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:17,687 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:17,781 | INFO     | [payload] control thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:17,783 | INFO     | all data control threads have been joined
[2025-06-05 06:28:52] 2025-06-05 04:25:18,112 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,224 | INFO     | [job] control thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:28:52] 2025-06-05 04:25:18,448 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,504 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:28:52] 2025-06-05 04:25:18,687 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,723 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,748 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,789 | INFO     | [data] control thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,842 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:18,867 | INFO     | [job] validate thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:19,540 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:22,334 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:28:52] 2025-06-05 04:25:24,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411109807936)>', '<ExcThread(monitor, started 140410500396800)>']
[2025-06-05 06:28:52] 2025-06-05 04:25:24,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:28:52] 2025-06-05 04:25:24,860 | INFO     | [monitor] control thread has ended
[2025-06-05 06:28:52] 2025-06-05 04:25:29,148 | INFO     | all workflow threads have been joined
[2025-06-05 06:28:52] 2025-06-05 04:25:29,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:28:52] 2025-06-05 04:25:29,149 | INFO     | traces error code: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:29,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:28:52] 2025-06-05 04:25:29,492 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:28:52] 2025-06-05 04:25:29,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:28:52] 2025-06-05 04:25:29,500 [wrapper] pilotpid: 29967
[2025-06-05 06:28:52] 2025-06-05 04:25:29,522 [wrapper] Pilot exit status: 0
[2025-06-05 06:28:52] 2025-06-05 04:25:30,051 [wrapper] pandaids: 6667923392
[2025-06-05 06:28:52] 2025-06-05 04:25:30,850 [wrapper] cleanup supervisor_pilot  8393 29968
[2025-06-05 06:28:52] 2025-06-05 04:25:30,890 [wrapper] Test setup, not cleaning
[2025-06-05 06:28:52] 2025-06-05 04:25:30,933 [wrapper] apfmon messages muted
[2025-06-05 06:28:52] 2025-06-05 04:25:30,971 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:28:52] 2025-06-05 04:25:31,013 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:28:52]  *** Error codes and diagnostics ***
[2025-06-05 06:28:52]     "exeErrorCode": 0,
[2025-06-05 06:28:52]     "exeErrorDiag": "",
[2025-06-05 06:28:52]     "pilotErrorCode": 0,
[2025-06-05 06:28:52]     "pilotErrorDiag": "",
[2025-06-05 06:28:52]  *** Listing of results directory ***
[2025-06-05 06:28:52] total 417476
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc    495897 May 28 04:39 pilot3.tar.gz
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc      5111 May 28 05:05 queuedata.json
[2025-06-05 06:28:52] -rwx------. 1 boinc boinc     37140 May 28 05:07 runpilot2-wrapper.sh
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:28:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:06 run_atlas
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:06 job.xml
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc 223755449 Jun  5 01:06 EVNT.44871834._003047.pool.root.1
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc      6390 Jun  5 01:06 init_data.xml
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:06 start_atlas.sh
[2025-06-05 06:28:52] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:06 shared
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc    508882 Jun  5 01:06 input.tar.gz
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:06 boinc_lockfile
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc      2559 Jun  5 01:06 pandaJob.out
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc    987032 Jun  5 01:09 agis_schedconf.cvmfs.json
[2025-06-05 06:28:52] drwx------. 4 boinc boinc      4096 Jun  5 01:09 pilot3
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc 195904308 Jun  5 06:22 HITS.44871837._077944.pool.root.1
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc       530 Jun  5 06:22 boinc_task_state.xml
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc      1014 Jun  5 06:23 memory_monitor_summary.json
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc   1598969 Jun  5 06:23 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc    415630 Jun  5 06:23 log.44871837._077944.job.log.tgz.1
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc      7687 Jun  5 06:25 heartbeat.json
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc        95 Jun  5 06:25 pilot_heartbeat.json
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc      4808 Jun  5 06:25 pilotlog.txt
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc   1596899 Jun  5 06:25 log.44871837._077944.job.log.1
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc       357 Jun  5 06:25 output.list
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc       620 Jun  5 06:25 runtime_log
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc   2027520 Jun  5 06:25 result.tar.gz
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc      8659 Jun  5 06:25 runtime_log.err
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc       657 Jun  5 06:25 hgdLDm5JMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdqSKDm7foK5m.diag
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:28 boinc_mmap_file
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:28 wrapper_checkpoint.txt
[2025-06-05 06:28:52] -rw-r--r--. 1 boinc boinc     20569 Jun  5 06:28 stderr.txt
[2025-06-05 06:28:52] HITS file was successfully produced:
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc 195904308 Jun  5 06:22 shared/HITS.pool.root.1
[2025-06-05 06:28:52]  *** Contents of shared directory: ***
[2025-06-05 06:28:52] total 412324
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc 223755449 Jun  5 01:06 ATLAS.root_0
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:06 start_atlas.sh
[2025-06-05 06:28:52] -rw-r--r--. 2 boinc boinc    508882 Jun  5 01:06 input.tar.gz
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc 195904308 Jun  5 06:22 HITS.pool.root.1
[2025-06-05 06:28:52] -rw-------. 1 boinc boinc   2027520 Jun  5 06:25 result.tar.gz
06:28:54 (25684): run_atlas exited; CPU time 70026.870394
06:28:54 (25684): called boinc_finish(0)

</stderr_txt>
]]>

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