Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:55:51 (1397297): wrapper (7.7.26015): starting
10:55:51 (1397297): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:55:51] Arguments: --nthreads 12
[2025-06-04 10:55:51] Threads: 12
[2025-06-04 10:55:51] Checking for CVMFS
[2025-06-04 10:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:55:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:55:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:55:52] 2.12.6.0 1448327 23418 396904 146783 1 66 38656895 40960000 5016 16776704 0 112582937 99.744 82067392 34438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:55:52] CVMFS is ok
[2025-06-04 10:55:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:55:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:55:52] Further information can be found at the LHC@home message board.
[2025-06-04 10:55:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:55:52] Checking for apptainer binary...
[2025-06-04 10:55:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:55:52] Running /usr/bin/apptainer --version
[2025-06-04 10:55:52] apptainer version 1.4.1-1.el9
[2025-06-04 10:55:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:55:52] c6-5-37-3.aglt2.org
[2025-06-04 10:55:52] apptainer works
[2025-06-04 10:55:52] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:55:52] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:55:52] Starting ATLAS job with PandaID=6679660172
[2025-06-04 10:55:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:34:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:34:07]  is_altstaged=None
[2025-06-04 11:34:07]  is_tar=False
[2025-06-04 11:34:07]  lfn=log.45006595._056589.job.log.tgz.1
[2025-06-04 11:34:07]  mtime=0
[2025-06-04 11:34:07]  protocol_id=None
[2025-06-04 11:34:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:34:07]  replicas=None
[2025-06-04 11:34:07]  scope=mc23_13p6TeV
[2025-06-04 11:34:07]  status=None
[2025-06-04 11:34:07]  status_code=0
[2025-06-04 11:34:07]  storage_token=
[2025-06-04 11:34:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679660172/log.45006595._056589.job.log.tgz.1
[2025-06-04 11:34:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/cc/log.45006595._056589.job.log.tgz.1
[2025-06-04 11:34:07]  workdir=None
[2025-06-04 11:34:07] ]
[2025-06-04 11:34:07] 2025-06-04 15:33:48,744 | INFO     | transferring file log.45006595._056589.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679660172/log.45006595._056589.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:34:07] 2025-06-04 15:33:48,744 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679660172/log.45006595._056589.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056589.job
[2025-06-04 11:34:07] 2025-06-04 15:33:48,757 | INFO     | adding to output.list: log.45006595._056589.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/cc/log.45006595._056589.job.log.tg
[2025-06-04 11:34:07] 2025-06-04 15:33:48,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:34:07] 2025-06-04 15:33:48,758 | INFO     | summary of transferred files:
[2025-06-04 11:34:07] 2025-06-04 15:33:48,758 | INFO     |  -- lfn=log.45006595._056589.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:34:07] 2025-06-04 15:33:48,758 | INFO     | stage-out finished correctly
[2025-06-04 11:34:07] 2025-06-04 15:33:51,430 | WARNING  | process 1407994 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:34:07] 2025-06-04 15:33:51,430 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679660172/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:34:07] 2025-06-04 15:33:51,485 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:34:07] 2025-06-04 15:33:51,597 | INFO     | number of running child processes to parent process 1407994: 1
[2025-06-04 11:34:07] 2025-06-04 15:33:51,597 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:34:07] 2025-06-04 15:33:53,213 | INFO     | job 6679660172 has state=finished
[2025-06-04 11:34:07] 2025-06-04 15:33:53,214 | INFO     | preparing for final server update for job 6679660172 in state='finished'
[2025-06-04 11:34:07] 2025-06-04 15:33:53,255 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:34:07] 2025-06-04 15:33:53,256 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:34:07] 2025-06-04 15:33:53,256 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:34:07] 2025-06-04 15:33:53,256 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:34:07] 2025-06-04 15:33:53,256 | INFO     | job 6679660172 has finished - writing final server update
[2025-06-04 11:34:07] 2025-06-04 15:33:53,256 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:34:07] 2025-06-04 15:33:53,271 | INFO     | executing command: lscpu
[2025-06-04 11:34:07] 2025-06-04 15:33:53,316 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:34:07] 2025-06-04 15:33:54,100 | INFO     | monitor loop #174: job 0:6679660172 is in state 'finished'
[2025-06-04 11:34:07] 2025-06-04 15:33:54,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,732 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:34:07] 2025-06-04 15:33:55,732 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679660172/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,733 | INFO     | extracted standard info from prmon json
[2025-06-04 11:34:07] 2025-06-04 15:33:55,733 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:34:07] 2025-06-04 15:33:55,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:34:07] 2025-06-04 15:33:55,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:34:07] 2025-06-04 15:33:55,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | sum of deviations: 1023518145.9999994
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | mean x: 1749050170.5
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | mean y: 2466454.2
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | -- intersect: -214058973937.61673
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | intersect: -214058973937.61673
[2025-06-04 11:34:07] 2025-06-04 15:33:55,735 | INFO     | chi2: 0.7606879650575405
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | -- intersect: -214058973937.61673
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | current memory leak: 122.39 B/s (using 30 data points, chi2=0.76)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | ..............................
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . Timing measurements:
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . get job = 0 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . initial setup = 3 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . payload setup = 3 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . stage-in = 0 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . payload execution = 2246 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,736 | INFO     | . stage-out = 0 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,737 | INFO     | . log creation = 0 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,737 | INFO     | ..............................
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | 
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | job summary report
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | --------------------------------------------------
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | PanDA job id: 6679660172
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | task id: 45006595
[2025-06-04 11:34:07] 2025-06-04 15:33:55,783 | INFO     | errors: (none)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | pilot state: finished 
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | transexitcode: 0
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | exeerrorcode: 0
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | exeerrordiag: 
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | exitcode: 0
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | exitmsg: OK
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | cpuconsumptiontime: 19771 s
[2025-06-04 11:34:07] 2025-06-04 15:33:55,784 | INFO     | nevents: 400
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | neventsw: 0
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | pid: 1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | pgrp: 1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | corecount: 12
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | event service: False
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | sizes: {0: 2397241, 3: 2397447, 11: 2397475, 2253: 2422511, 2255: 2431452, 2257: 2431508, 2262: 2431806}
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | --------------------------------------------------
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | 
[2025-06-04 11:34:07] 2025-06-04 15:33:55,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:34:07] 2025-06-04 15:33:55,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,799 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:34:07] 2025-06-04 15:33:55,800 | INFO     | job 6679660172 has completed (purged errors)
[2025-06-04 11:34:07] 2025-06-04 15:33:55,800 | INFO     | overall cleanup function is called
[2025-06-04 11:34:07] 2025-06-04 15:33:55,811 | INFO     | PID=1400943 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 11:34:07] 2025-06-04 15:33:55,811 | INFO     | .. there are 8 such processes running
[2025-06-04 11:34:07] 2025-06-04 15:33:56,809 | INFO     | --- collectZombieJob: --- 10, [1407994]
[2025-06-04 11:34:07] 2025-06-04 15:33:56,809 | INFO     | zombie collector waiting for pid 1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:56,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:34:07] 2025-06-04 15:33:56,809 | INFO     | collected zombie processes
[2025-06-04 11:34:07] 2025-06-04 15:33:56,809 | INFO     | will attempt to kill all subprocesses of pid=1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:56,936 | INFO     | process IDs to be killed: [1407994] (in reverse order)
[2025-06-04 11:34:07] 2025-06-04 15:33:56,986 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:34:07] 2025-06-04 15:33:56,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:34:07] 2025-06-04 15:33:56,992 | INFO     | did not find any defunct processes belonging to 1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:56,998 | INFO     | did not find any defunct processes belonging to 1407994
[2025-06-04 11:34:07] 2025-06-04 15:33:56,998 | INFO     | ready for new job
[2025-06-04 11:34:07] 2025-06-04 15:33:56,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:34:07] 2025-06-04 15:33:56,999 | INFO     | **************************************
[2025-06-04 11:34:07] 2025-06-04 15:33:57,000 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:34:07] 2025-06-04 15:33:57,000 | INFO     | **************************************
[2025-06-04 11:34:07] 2025-06-04 15:33:57,000 | INFO     | 
[2025-06-04 11:34:07] 2025-06-04 15:33:57,013 | INFO     | architecture information:
[2025-06-04 11:34:07] 2025-06-04 15:33:57,013 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:34:07] 2025-06-04 15:33:57,023 | INFO     | cat /etc/os-release:
[2025-06-04 11:34:07] NAME="CentOS Linux"
[2025-06-04 11:34:07] VERSION="7 (Core)"
[2025-06-04 11:34:07] ID="centos"
[2025-06-04 11:34:07] ID_LIKE="rhel fedora"
[2025-06-04 11:34:07] VERSION_ID="7"
[2025-06-04 11:34:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:34:07] ANSI_COLOR="0;31"
[2025-06-04 11:34:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:34:07] HOME_URL="https://www.centos.org/"
[2025-06-04 11:34:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:34:07] 
[2025-06-04 11:34:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:34:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:34:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:34:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:34:07] 
[2025-06-04 11:34:07] 2025-06-04 15:33:57,023 | INFO     | **************************************
[2025-06-04 11:34:07] 2025-06-04 15:33:57,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:34:07] 2025-06-04 15:33:57,535 | INFO     | sufficient remaining disk space (75553046528 B)
[2025-06-04 11:34:07] 2025-06-04 15:33:57,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:34:07] 2025-06-04 15:33:57,535 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:34:07] 2025-06-04 15:33:57,536 | INFO     | update_server=False
[2025-06-04 11:34:07] 2025-06-04 15:33:57,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:34:07] 2025-06-04 15:33:57,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:34:07] 2025-06-04 15:33:57,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:34:07] 2025-06-04 15:33:57,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:34:07] 2025-06-04 15:33:57,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:34:07] 2025-06-04 15:33:57,603 | INFO     | aborting loop
[2025-06-04 11:34:07] 2025-06-04 15:33:57,624 | INFO     | all data control threads have been joined
[2025-06-04 11:34:07] 2025-06-04 15:33:57,816 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:34:07] 2025-06-04 15:33:57,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:34:07] 2025-06-04 15:33:57,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:34:07] 2025-06-04 15:33:57,831 | INFO     | all job control threads have been joined
[2025-06-04 11:34:07] 2025-06-04 15:33:58,541 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,541 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,608 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,629 | INFO     | [data] control thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,759 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,837 | INFO     | [job] control thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,855 | INFO     | all payload control threads have been joined
[2025-06-04 11:34:07] 2025-06-04 15:33:58,967 | INFO     | [job] validate thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:58,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,179 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,207 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,541 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,860 | INFO     | [payload] control thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:33:59,900 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:34:00,002 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:34:01,541 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:34:07] 2025-06-04 15:34:02,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279410902848)>', '<ExcThread(monitor, started 140278790874880)>']
[2025-06-04 11:34:07] 2025-06-04 15:34:02,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:34:07] 2025-06-04 15:34:02,841 | INFO     | [monitor] control thread has ended
[2025-06-04 11:34:07] 2025-06-04 15:34:07,416 | INFO     | all workflow threads have been joined
[2025-06-04 11:34:07] 2025-06-04 15:34:07,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:34:07] 2025-06-04 15:34:07,416 | INFO     | traces error code: 0
[2025-06-04 11:34:07] 2025-06-04 15:34:07,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:34:07] 2025-06-04 15:34:07,505 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:34:07] 2025-06-04 15:34:07,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:34:07] 2025-06-04 15:34:07,508 [wrapper] pilotpid: 1400943
[2025-06-04 11:34:07] 2025-06-04 15:34:07,510 [wrapper] Pilot exit status: 0
[2025-06-04 11:34:07] 2025-06-04 15:34:07,516 [wrapper] pandaids: 6679660172
[2025-06-04 11:34:07] 2025-06-04 15:34:07,551 [wrapper] cleanup supervisor_pilot 1458664 1400944
[2025-06-04 11:34:07] 2025-06-04 15:34:07,553 [wrapper] Test setup, not cleaning
[2025-06-04 11:34:07] 2025-06-04 15:34:07,555 [wrapper] apfmon messages muted
[2025-06-04 11:34:07] 2025-06-04 15:34:07,557 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:34:07] 2025-06-04 15:34:07,558 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:34:07]  *** Error codes and diagnostics ***
[2025-06-04 11:34:07]     "exeErrorCode": 0,
[2025-06-04 11:34:07]     "exeErrorDiag": "",
[2025-06-04 11:34:07]     "pilotErrorCode": 0,
[2025-06-04 11:34:07]     "pilotErrorDiag": "",
[2025-06-04 11:34:07]  *** Listing of results directory ***
[2025-06-04 11:34:07] total 388380
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 07:30 pilot3.tar.gz
[2025-06-04 11:34:07] -rwx------. 1 boincer umatlas     37140 Jun  4 07:38 runpilot2-wrapper.sh
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 07:38 queuedata.json
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:34:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:55 run_atlas
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:55 job.xml
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas 216945017 Jun  4 10:55 EVNT.45006593._001777.pool.root.1
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:55 start_atlas.sh
[2025-06-04 11:34:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:55 shared
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:55 input.tar.gz
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:55 boinc_lockfile
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 10:55 pandaJob.out
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas    987207 Jun  4 10:55 agis_schedconf.cvmfs.json
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:34:07] drwx------. 4 boincer umatlas      4096 Jun  4 10:56 pilot3
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 11:31 init_data.xml
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas 175735846 Jun  4 11:33 HITS.45006595._056589.pool.root.1
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:33 boinc_task_state.xml
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas        95 Jun  4 11:33 pilot_heartbeat.json
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas      1028 Jun  4 11:33 memory_monitor_summary.json
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:33 boinc_mmap_file
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:33 wrapper_checkpoint.txt
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas    339173 Jun  4 11:33 log.45006595._056589.job.log.tgz.1
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas      7706 Jun  4 11:33 heartbeat.json
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas      4353 Jun  4 11:34 pilotlog.txt
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas    253768 Jun  4 11:34 log.45006595._056589.job.log.1
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas       357 Jun  4 11:34 output.list
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:34 runtime_log
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas    614400 Jun  4 11:34 result.tar.gz
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 11:34 runtime_log.err
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas       650 Jun  4 11:34 oj2MDmCd1g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQynKDmB0eitn.diag
[2025-06-04 11:34:07] -rw-r--r--. 1 boincer umatlas     21498 Jun  4 11:34 stderr.txt
[2025-06-04 11:34:07] HITS file was successfully produced:
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas 175735846 Jun  4 11:33 shared/HITS.pool.root.1
[2025-06-04 11:34:07]  *** Contents of shared directory: ***
[2025-06-04 11:34:07] total 384604
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas 216945017 Jun  4 10:55 ATLAS.root_0
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:55 start_atlas.sh
[2025-06-04 11:34:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:55 input.tar.gz
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas 175735846 Jun  4 11:33 HITS.pool.root.1
[2025-06-04 11:34:07] -rw-------. 1 boincer umatlas    614400 Jun  4 11:34 result.tar.gz
11:34:09 (1397297): run_atlas exited; CPU time 19803.457184
11:34:09 (1397297): called boinc_finish(0)

</stderr_txt>
]]>

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