Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:09:34 (12086): wrapper (7.7.26015): starting
10:09:34 (12086): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:09:34] Arguments: --nthreads 8
[2025-06-04 10:09:34] Threads: 8
[2025-06-04 10:09:34] Checking for CVMFS
[2025-06-04 10:09:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:09:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:09:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:09:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:09:35] 2.11.2.0 12263 11237 314844 146781 3 702 12409718 18432000 15209 130560 0 87360811 99.312 114768151 59293 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:09:35] CVMFS is ok
[2025-06-04 10:09:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:09:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:09:35] Further information can be found at the LHC@home message board.
[2025-06-04 10:09:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:09:35] Checking for apptainer binary...
[2025-06-04 10:09:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:09:35] Running /usr/bin/apptainer --version
[2025-06-04 10:09:35] apptainer version 1.3.2-1.el7
[2025-06-04 10:09:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:09:35] c-212-14.aglt2.org
[2025-06-04 10:09:35] apptainer works
[2025-06-04 10:09:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:09:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:09:35] Starting ATLAS job with PandaID=6679660146
[2025-06-04 10:09:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:20:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:20:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:20:16]  is_altstaged=None
[2025-06-04 11:20:16]  is_tar=False
[2025-06-04 11:20:16]  lfn=log.45006595._056587.job.log.tgz.1
[2025-06-04 11:20:16]  mtime=0
[2025-06-04 11:20:16]  protocol_id=None
[2025-06-04 11:20:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:20:16]  replicas=None
[2025-06-04 11:20:16]  scope=mc23_13p6TeV
[2025-06-04 11:20:16]  status=None
[2025-06-04 11:20:16]  status_code=0
[2025-06-04 11:20:16]  storage_token=
[2025-06-04 11:20:16]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6679660146/log.45006595._056587.job.log.tgz.1
[2025-06-04 11:20:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/e3/log.45006595._056587.job.log.tgz.1
[2025-06-04 11:20:16]  workdir=None
[2025-06-04 11:20:16] ]
[2025-06-04 11:20:16] 2025-06-04 15:19:52,175 | INFO     | transferring file log.45006595._056587.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6679660146/log.45006595._056587.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:20:16] 2025-06-04 15:19:52,176 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6679660146/log.45006595._056587.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._056587.job
[2025-06-04 11:20:16] 2025-06-04 15:19:52,198 | INFO     | adding to output.list: log.45006595._056587.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/e3/log.45006595._056587.job.log.tg
[2025-06-04 11:20:16] 2025-06-04 15:19:52,199 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:20:16] 2025-06-04 15:19:52,199 | INFO     | summary of transferred files:
[2025-06-04 11:20:16] 2025-06-04 15:19:52,199 | INFO     |  -- lfn=log.45006595._056587.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:20:16] 2025-06-04 15:19:52,199 | INFO     | stage-out finished correctly
[2025-06-04 11:20:16] 2025-06-04 15:19:53,469 | INFO     | monitor loop #312: job 0:6679660146 is in state 'finished'
[2025-06-04 11:20:16] 2025-06-04 15:19:53,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:20:16] 2025-06-04 15:19:54,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:20:16] 2025-06-04 15:19:54,852 | INFO     | job 6679660146 has state=finished
[2025-06-04 11:20:16] 2025-06-04 15:19:54,852 | INFO     | preparing for final server update for job 6679660146 in state='finished'
[2025-06-04 11:20:16] 2025-06-04 15:19:54,853 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:20:16] 2025-06-04 15:19:54,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:20:16] 2025-06-04 15:19:54,853 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:20:16] 2025-06-04 15:19:54,853 | INFO     | job 6679660146 has finished - writing final server update
[2025-06-04 11:20:16] 2025-06-04 15:19:54,853 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:20:16] 2025-06-04 15:19:54,856 | INFO     | executing command: lscpu
[2025-06-04 11:20:16] 2025-06-04 15:19:54,921 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:20:16] 2025-06-04 15:19:55,974 | INFO     | monitor loop #313: job 0:6679660146 is in state 'finished'
[2025-06-04 11:20:16] 2025-06-04 15:19:55,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:20:16] 2025-06-04 15:19:58,479 | INFO     | monitor loop #314: job 0:6679660146 is in state 'finished'
[2025-06-04 11:20:16] 2025-06-04 15:19:58,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:20:16] 2025-06-04 15:20:00,983 | INFO     | monitor loop #315: job 0:6679660146 is in state 'finished'
[2025-06-04 11:20:16] 2025-06-04 15:20:00,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,381 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:20:16] 2025-06-04 15:20:02,382 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6679660146/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,383 | INFO     | extracted standard info from prmon json
[2025-06-04 11:20:16] 2025-06-04 15:20:02,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:20:16] 2025-06-04 15:20:02,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:20:16] 2025-06-04 15:20:02,383 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:20:16] 2025-06-04 15:20:02,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | sum of deviations: -446730572.0
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | mean x: 1749048382.5
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | mean y: 2495733.580645161
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | -- intersect: 10578144034.288
[2025-06-04 11:20:16] 2025-06-04 15:20:02,385 | INFO     | intersect: 10578144034.288
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | chi2: 0.001459516676490627
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | -- intersect: 10578144034.288
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | current memory leak: -6.05 B/s (using 62 data points, chi2=0.00)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | ..............................
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . Timing measurements:
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . get job = 0 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . initial setup = 2 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . payload setup = 6 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . stage-in = 0 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,386 | INFO     | . payload execution = 4177 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,387 | INFO     | . stage-out = 0 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,387 | INFO     | . log creation = 0 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,387 | INFO     | ..............................
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | 
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | job summary report
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | --------------------------------------------------
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | PanDA job id: 6679660146
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | task id: 45006595
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | errors: (none)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | pilot state: finished 
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | transexitcode: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | exeerrorcode: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | exeerrordiag: 
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | exitcode: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | exitmsg: OK
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | cpuconsumptiontime: 28511 s
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | nevents: 400
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | neventsw: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | pid: 26962
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | pgrp: 26962
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | corecount: 8
[2025-06-04 11:20:16] 2025-06-04 15:20:02,627 | INFO     | event service: False
[2025-06-04 11:20:16] 2025-06-04 15:20:02,628 | INFO     | sizes: {0: 2397120, 1: 2397319, 5: 2397525, 11: 2397581, 4188: 2423298, 4189: 2432239, 4190: 2432423, 4199: 2432593}
[2025-06-04 11:20:16] 2025-06-04 15:20:02,628 | INFO     | --------------------------------------------------
[2025-06-04 11:20:16] 2025-06-04 15:20:02,628 | INFO     | 
[2025-06-04 11:20:16] 2025-06-04 15:20:02,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 11:20:16] 2025-06-04 15:20:02,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:20:16] 2025-06-04 15:20:02,643 | INFO     | job 6679660146 has completed (purged errors)
[2025-06-04 11:20:16] 2025-06-04 15:20:02,643 | INFO     | overall cleanup function is called
[2025-06-04 11:20:16] 2025-06-04 15:20:03,650 | INFO     | --- collectZombieJob: --- 10, [26962]
[2025-06-04 11:20:16] 2025-06-04 15:20:03,650 | INFO     | zombie collector waiting for pid 26962
[2025-06-04 11:20:16] 2025-06-04 15:20:03,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:20:16] 2025-06-04 15:20:03,650 | INFO     | collected zombie processes
[2025-06-04 11:20:16] 2025-06-04 15:20:03,650 | INFO     | will attempt to kill all subprocesses of pid=26962
[2025-06-04 11:20:16] 2025-06-04 15:20:03,885 | INFO     | process IDs to be killed: [26962] (in reverse order)
[2025-06-04 11:20:16] 2025-06-04 15:20:04,046 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:20:16] 2025-06-04 15:20:04,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:20:16] 2025-06-04 15:20:04,062 | INFO     | did not find any defunct processes belonging to 26962
[2025-06-04 11:20:16] 2025-06-04 15:20:04,076 | INFO     | did not find any defunct processes belonging to 26962
[2025-06-04 11:20:16] 2025-06-04 15:20:04,077 | INFO     | ready for new job
[2025-06-04 11:20:16] 2025-06-04 15:20:04,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:20:16] 2025-06-04 15:20:04,079 | INFO     | **************************************
[2025-06-04 11:20:16] 2025-06-04 15:20:04,079 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:20:16] 2025-06-04 15:20:04,079 | INFO     | **************************************
[2025-06-04 11:20:16] 2025-06-04 15:20:04,079 | INFO     | 
[2025-06-04 11:20:16] 2025-06-04 15:20:04,084 | INFO     | architecture information:
[2025-06-04 11:20:16] 2025-06-04 15:20:04,084 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:20:16] 2025-06-04 15:20:04,099 | INFO     | cat /etc/os-release:
[2025-06-04 11:20:16] NAME="CentOS Linux"
[2025-06-04 11:20:16] VERSION="7 (Core)"
[2025-06-04 11:20:16] ID="centos"
[2025-06-04 11:20:16] ID_LIKE="rhel fedora"
[2025-06-04 11:20:16] VERSION_ID="7"
[2025-06-04 11:20:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:20:16] ANSI_COLOR="0;31"
[2025-06-04 11:20:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:20:16] HOME_URL="https://www.centos.org/"
[2025-06-04 11:20:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:20:16] 
[2025-06-04 11:20:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:20:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:20:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:20:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:20:16] 
[2025-06-04 11:20:16] 2025-06-04 15:20:04,100 | INFO     | **************************************
[2025-06-04 11:20:16] 2025-06-04 15:20:04,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | INFO     | sufficient remaining disk space (103897104384 B)
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | INFO     | update_server=False
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:20:16] 2025-06-04 15:20:04,638 | INFO     | aborting loop
[2025-06-04 11:20:16] 2025-06-04 15:20:04,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:20:16] 2025-06-04 15:20:05,195 | INFO     | all payload control threads have been joined
[2025-06-04 11:20:16] 2025-06-04 15:20:05,254 | INFO     | all data control threads have been joined
[2025-06-04 11:20:16] 2025-06-04 15:20:05,289 | INFO     | all job control threads have been joined
[2025-06-04 11:20:16] 2025-06-04 15:20:05,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:20:16] 2025-06-04 15:20:05,633 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:20:16] 2025-06-04 15:20:05,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:20:16] 2025-06-04 15:20:05,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:20:16] 2025-06-04 15:20:05,642 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:05,643 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:05,656 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:05,924 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,201 | INFO     | [payload] control thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,259 | INFO     | [data] control thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,296 | INFO     | [job] control thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,472 | INFO     | [job] validate thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,796 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,912 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:06,924 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:07,136 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:07,309 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:07,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:20:16] 2025-06-04 15:20:08,483 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:08,750 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:20:16] 2025-06-04 15:20:10,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317314832192)>', '<ExcThread(monitor, started 140317017749248)>']
[2025-06-04 11:20:16] 2025-06-04 15:20:11,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:20:16] 2025-06-04 15:20:11,662 | INFO     | [monitor] control thread has ended
[2025-06-04 11:20:16] 2025-06-04 15:20:15,714 | INFO     | all workflow threads have been joined
[2025-06-04 11:20:16] 2025-06-04 15:20:15,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:20:16] 2025-06-04 15:20:15,714 | INFO     | traces error code: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:15,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:20:16] 2025-06-04 15:20:16,009 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:20:16] 2025-06-04 15:20:16,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:20:16] 2025-06-04 15:20:16,041 [wrapper] pilotpid: 17358
[2025-06-04 11:20:16] 2025-06-04 15:20:16,044 [wrapper] Pilot exit status: 0
[2025-06-04 11:20:16] 2025-06-04 15:20:16,077 [wrapper] pandaids: 6679660146
[2025-06-04 11:20:16] 2025-06-04 15:20:16,163 [wrapper] cleanup supervisor_pilot 21200 17359
[2025-06-04 11:20:16] 2025-06-04 15:20:16,165 [wrapper] Test setup, not cleaning
[2025-06-04 11:20:16] 2025-06-04 15:20:16,166 [wrapper] apfmon messages muted
[2025-06-04 11:20:16] 2025-06-04 15:20:16,168 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:20:16] 2025-06-04 15:20:16,170 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:20:16]  *** Error codes and diagnostics ***
[2025-06-04 11:20:16]     "exeErrorCode": 0,
[2025-06-04 11:20:16]     "exeErrorDiag": "",
[2025-06-04 11:20:16]     "pilotErrorCode": 0,
[2025-06-04 11:20:16]     "pilotErrorDiag": "",
[2025-06-04 11:20:16]  *** Listing of results directory ***
[2025-06-04 11:20:16] total 392620
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 07:30 pilot3.tar.gz
[2025-06-04 11:20:16] -rwx------ 1 boincer umatlas     37140 Jun  4 07:38 runpilot2-wrapper.sh
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 07:38 queuedata.json
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:20:16] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:09 run_atlas
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:09 job.xml
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas 216723016 Jun  4 10:09 EVNT.45006593._001981.pool.root.1
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:09 start_atlas.sh
[2025-06-04 11:20:16] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:09 shared
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:09 input.tar.gz
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:09 boinc_lockfile
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 10:09 pandaJob.out
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas    986819 Jun  4 10:09 agis_schedconf.cvmfs.json
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas   1598969 Jun  4 10:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:20:16] drwx------ 4 boincer umatlas      4096 Jun  4 10:09 pilot3
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 11:12 init_data.xml
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas        95 Jun  4 11:19 pilot_heartbeat.json
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas 180027129 Jun  4 11:19 HITS.45006595._056587.pool.root.1
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:19 boinc_task_state.xml
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas      1071 Jun  4 11:19 memory_monitor_summary.json
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas    312848 Jun  4 11:19 log.45006595._056587.job.log.tgz.1
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas      7739 Jun  4 11:20 heartbeat.json
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:20 boinc_mmap_file
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:20 wrapper_checkpoint.txt
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas      4354 Jun  4 11:20 pilotlog.txt
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas    417861 Jun  4 11:20 log.45006595._056587.job.log.1
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas       357 Jun  4 11:20 output.list
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:20 runtime_log
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas    747520 Jun  4 11:20 result.tar.gz
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:20 runtime_log.err
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas       658 Jun  4 11:20 ocoMDmCd1g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOynKDm3YcXYn.diag
[2025-06-04 11:20:16] -rw-r--r-- 1 boincer umatlas     21354 Jun  4 11:20 stderr.txt
[2025-06-04 11:20:16] HITS file was successfully produced:
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas 180027129 Jun  4 11:19 shared/HITS.pool.root.1
[2025-06-04 11:20:16]  *** Contents of shared directory: ***
[2025-06-04 11:20:16] total 388708
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas 216723016 Jun  4 10:09 ATLAS.root_0
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:09 start_atlas.sh
[2025-06-04 11:20:16] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 10:09 input.tar.gz
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas 180027129 Jun  4 11:19 HITS.pool.root.1
[2025-06-04 11:20:16] -rw------- 1 boincer umatlas    747520 Jun  4 11:20 result.tar.gz
11:20:17 (12086): run_atlas exited; CPU time 28471.447501
11:20:17 (12086): called boinc_finish(0)

</stderr_txt>
]]>

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