Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:07 (2130856): wrapper (7.7.26015): starting
10:00:07 (2130856): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:00:07] Arguments: --nthreads 8
[2025-06-04 10:00:07] Threads: 8
[2025-06-04 10:00:07] Checking for CVMFS
[2025-06-04 10:00:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:00:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:00:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:00:08] 2.12.6.0 46158 23862 353732 146781 3 584 30366664 40960001 53328 16776704 0 370745970 99.776 213810439 34073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:00:08] CVMFS is ok
[2025-06-04 10:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:00:08] Further information can be found at the LHC@home message board.
[2025-06-04 10:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:00:08] Checking for apptainer binary...
[2025-06-04 10:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:00:08] Running /usr/bin/apptainer --version
[2025-06-04 10:00:08] apptainer version 1.4.1-1.el9
[2025-06-04 10:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:00:08] c8-6-11.aglt2.org
[2025-06-04 10:00:08] apptainer works
[2025-06-04 10:00:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:00:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:00:08] Starting ATLAS job with PandaID=6679655336
[2025-06-04 10:00:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:14:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:14:25]  guid=6dd2c3f9-8c75-478b-b64b-39e2488ea39f
[2025-06-04 11:14:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:14:25]  is_altstaged=None
[2025-06-04 11:14:25]  is_tar=False
[2025-06-04 11:14:25]  lfn=log.44871837._102210.job.log.tgz.1
[2025-06-04 11:14:25]  mtime=0
[2025-06-04 11:14:25]  protocol_id=None
[2025-06-04 11:14:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:14:25]  replicas=None
[2025-06-04 11:14:25]  scope=mc23_13p6TeV
[2025-06-04 11:14:25]  status=None
[2025-06-04 11:14:25]  status_code=0
[2025-06-04 11:14:25]  storage_token=
[2025-06-04 11:14:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679655336/log.44871837._102210.job.log.tgz.1
[2025-06-04 11:14:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/0f/log.44871837._102210.job.log.tgz.1
[2025-06-04 11:14:25]  workdir=None
[2025-06-04 11:14:25] ]
[2025-06-04 11:14:25] 2025-06-04 15:13:58,240 | INFO     | transferring file log.44871837._102210.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679655336/log.44871837._102210.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:14:25] 2025-06-04 15:13:58,241 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679655336/log.44871837._102210.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._102210.job
[2025-06-04 11:14:25] 2025-06-04 15:13:58,259 | INFO     | adding to output.list: log.44871837._102210.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/0f/log.44871837._102210.job.log.tg
[2025-06-04 11:14:25] 2025-06-04 15:13:58,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:14:25] 2025-06-04 15:13:58,259 | INFO     | summary of transferred files:
[2025-06-04 11:14:25] 2025-06-04 15:13:58,259 | INFO     |  -- lfn=log.44871837._102210.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:14:25] 2025-06-04 15:13:58,259 | INFO     | stage-out finished correctly
[2025-06-04 11:14:25] 2025-06-04 15:13:59,300 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:14:25] 2025-06-04 15:14:00,548 | INFO     | job 6679655336 has state=finished
[2025-06-04 11:14:25] 2025-06-04 15:14:00,549 | INFO     | preparing for final server update for job 6679655336 in state='finished'
[2025-06-04 11:14:25] 2025-06-04 15:14:00,549 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:14:25] 2025-06-04 15:14:00,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:14:25] 2025-06-04 15:14:00,549 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:14:25] 2025-06-04 15:14:00,549 | INFO     | job 6679655336 has finished - writing final server update
[2025-06-04 11:14:25] 2025-06-04 15:14:00,550 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:14:25] 2025-06-04 15:14:00,568 | INFO     | executing command: lscpu
[2025-06-04 11:14:25] 2025-06-04 15:14:00,647 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:14:25] 2025-06-04 15:14:02,382 | WARNING  | process 2166869 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:14:25] 2025-06-04 15:14:02,382 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679655336/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:14:25] 2025-06-04 15:14:02,866 | INFO     | number of running child processes to parent process 2166869: 1
[2025-06-04 11:14:25] 2025-06-04 15:14:02,867 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:14:25] 2025-06-04 15:14:05,210 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:14:25] 2025-06-04 15:14:05,211 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679655336/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:14:25] 2025-06-04 15:14:05,211 | INFO     | extracted standard info from prmon json
[2025-06-04 11:14:25] 2025-06-04 15:14:05,211 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:14:25] 2025-06-04 15:14:05,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:14:25] 2025-06-04 15:14:05,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:14:25] 2025-06-04 15:14:05,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:14:25] 2025-06-04 15:14:05,212 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | sum of deviations: 5854058736.0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | mean x: 1749047909.0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | mean y: 2209151.769230769
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | -- intersect: -120263852956.55357
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | intersect: -120263852956.55357
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | chi2: 0.7756051457907839
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | -- intersect: -120263852956.55357
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | current memory leak: 68.76 B/s (using 65 data points, chi2=0.78)
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | ..............................
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | . Timing measurements:
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | . get job = 0 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,213 | INFO     | . initial setup = 2 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | . payload setup = 7 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | . stage-in = 0 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | . payload execution = 4387 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | . stage-out = 0 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | . log creation = 0 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,214 | INFO     | ..............................
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | 
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | job summary report
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | --------------------------------------------------
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | PanDA job id: 6679655336
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | task id: 44871837
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | errors: (none)
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | pilot state: finished 
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | transexitcode: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | exeerrorcode: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,312 | INFO     | exeerrordiag: 
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | exitcode: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | exitmsg: OK
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | cpuconsumptiontime: 28371 s
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | nevents: 400
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | neventsw: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | pid: 2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | pgrp: 2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | corecount: 8
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | event service: False
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | sizes: {0: 2397341, 7: 2397547, 11: 2397575, 4399: 2423557, 4400: 2432553, 4401: 2432553, 4407: 2432851}
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | --------------------------------------------------
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | 
[2025-06-04 11:14:25] 2025-06-04 15:14:05,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:14:25] 2025-06-04 15:14:05,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | job 6679655336 has completed (purged errors)
[2025-06-04 11:14:25] 2025-06-04 15:14:05,335 | INFO     | overall cleanup function is called
[2025-06-04 11:14:25] 2025-06-04 15:14:06,342 | INFO     | --- collectZombieJob: --- 10, [2166869]
[2025-06-04 11:14:25] 2025-06-04 15:14:06,343 | INFO     | zombie collector waiting for pid 2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:06,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:14:25] 2025-06-04 15:14:06,343 | INFO     | collected zombie processes
[2025-06-04 11:14:25] 2025-06-04 15:14:06,343 | INFO     | will attempt to kill all subprocesses of pid=2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:06,829 | INFO     | process IDs to be killed: [2166869] (in reverse order)
[2025-06-04 11:14:25] 2025-06-04 15:14:07,035 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:14:25] 2025-06-04 15:14:07,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:14:25] 2025-06-04 15:14:07,063 | INFO     | did not find any defunct processes belonging to 2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:07,090 | INFO     | did not find any defunct processes belonging to 2166869
[2025-06-04 11:14:25] 2025-06-04 15:14:07,090 | INFO     | ready for new job
[2025-06-04 11:14:25] 2025-06-04 15:14:07,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:14:25] 2025-06-04 15:14:07,091 | INFO     | **************************************
[2025-06-04 11:14:25] 2025-06-04 15:14:07,091 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:14:25] 2025-06-04 15:14:07,091 | INFO     | **************************************
[2025-06-04 11:14:25] 2025-06-04 15:14:07,091 | INFO     | 
[2025-06-04 11:14:25] 2025-06-04 15:14:07,108 | INFO     | architecture information:
[2025-06-04 11:14:25] 2025-06-04 15:14:07,108 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:14:25] 2025-06-04 15:14:07,119 | INFO     | cat /etc/os-release:
[2025-06-04 11:14:25] NAME="CentOS Linux"
[2025-06-04 11:14:25] VERSION="7 (Core)"
[2025-06-04 11:14:25] ID="centos"
[2025-06-04 11:14:25] ID_LIKE="rhel fedora"
[2025-06-04 11:14:25] VERSION_ID="7"
[2025-06-04 11:14:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:14:25] ANSI_COLOR="0;31"
[2025-06-04 11:14:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:14:25] HOME_URL="https://www.centos.org/"
[2025-06-04 11:14:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:14:25] 
[2025-06-04 11:14:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:14:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:14:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:14:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:14:25] 
[2025-06-04 11:14:25] 2025-06-04 15:14:07,119 | INFO     | **************************************
[2025-06-04 11:14:25] 2025-06-04 15:14:07,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:14:25] 2025-06-04 15:14:07,635 | INFO     | sufficient remaining disk space (173094731776 B)
[2025-06-04 11:14:25] 2025-06-04 15:14:07,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:14:25] 2025-06-04 15:14:07,635 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:14:25] 2025-06-04 15:14:07,635 | INFO     | update_server=False
[2025-06-04 11:14:25] 2025-06-04 15:14:07,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:14:25] 2025-06-04 15:14:07,877 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:14:25] 2025-06-04 15:14:07,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:14:25] 2025-06-04 15:14:07,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:14:25] 2025-06-04 15:14:07,878 | INFO     | will abort loop
[2025-06-04 11:14:25] 2025-06-04 15:14:08,024 | INFO     | all payload control threads have been joined
[2025-06-04 11:14:25] 2025-06-04 15:14:08,144 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:14:25] 2025-06-04 15:14:08,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:14:25] 2025-06-04 15:14:08,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:14:25] 2025-06-04 15:14:08,509 | INFO     | all data control threads have been joined
[2025-06-04 11:14:25] 2025-06-04 15:14:08,640 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:08,753 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:08,801 | INFO     | [job] validate thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:08,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:14:25] 2025-06-04 15:14:08,884 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:08,931 | INFO     | all job control threads have been joined
[2025-06-04 11:14:25] 2025-06-04 15:14:09,029 | INFO     | [payload] control thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,173 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,484 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,515 | INFO     | [data] control thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,583 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:14:25] 2025-06-04 15:14:09,936 | INFO     | [job] control thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:09,955 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:10,134 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:10,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:14:25] 2025-06-04 15:14:10,815 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:11,279 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:13,867 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:17,877 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:14:25] 2025-06-04 15:14:18,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:14:25] 2025-06-04 15:14:19,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844694615872)>', '<ExcThread(monitor, started 139843908650752)>']
[2025-06-04 11:14:25] 2025-06-04 15:14:20,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:14:25] 2025-06-04 15:14:20,209 | INFO     | [monitor] control thread has ended
[2025-06-04 11:14:25] 2025-06-04 15:14:24,874 | INFO     | all workflow threads have been joined
[2025-06-04 11:14:25] 2025-06-04 15:14:24,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:14:25] 2025-06-04 15:14:24,875 | INFO     | traces error code: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:24,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:14:25] 2025-06-04 15:14:25,005 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:14:25] 2025-06-04 15:14:25,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:14:25] 2025-06-04 15:14:25,010 [wrapper] pilotpid: 2142772
[2025-06-04 11:14:25] 2025-06-04 15:14:25,013 [wrapper] Pilot exit status: 0
[2025-06-04 11:14:25] 2025-06-04 15:14:25,022 [wrapper] pandaids: 6679655336
[2025-06-04 11:14:25] 2025-06-04 15:14:25,163 [wrapper] cleanup supervisor_pilot 4096360 2142773
[2025-06-04 11:14:25] 2025-06-04 15:14:25,166 [wrapper] Test setup, not cleaning
[2025-06-04 11:14:25] 2025-06-04 15:14:25,169 [wrapper] apfmon messages muted
[2025-06-04 11:14:25] 2025-06-04 15:14:25,173 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:14:25] 2025-06-04 15:14:25,175 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:14:25]  *** Error codes and diagnostics ***
[2025-06-04 11:14:25]     "exeErrorCode": 0,
[2025-06-04 11:14:25]     "exeErrorDiag": "",
[2025-06-04 11:14:25]     "pilotErrorCode": 0,
[2025-06-04 11:14:25]     "pilotErrorDiag": "",
[2025-06-04 11:14:25]  *** Listing of results directory ***
[2025-06-04 11:14:25] total 412264
[2025-06-04 11:14:25] -rwx------. 1 boincer umatlas     37140 Jun  4 07:30 runpilot2-wrapper.sh
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 07:30 queuedata.json
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 07:30 pilot3.tar.gz
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:14:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:00 run_atlas
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:00 job.xml
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas 223226794 Jun  4 10:00 EVNT.44871834._002816.pool.root.1
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 11:14:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:00 shared
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 10:00 input.tar.gz
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:00 boinc_lockfile
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 10:00 pandaJob.out
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas    986819 Jun  4 10:00 agis_schedconf.cvmfs.json
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:14:25] drwx------. 4 boincer umatlas      4096 Jun  4 10:00 pilot3
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 11:10 init_data.xml
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas        95 Jun  4 11:13 pilot_heartbeat.json
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas 193645784 Jun  4 11:13 HITS.44871837._102210.pool.root.1
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:13 boinc_task_state.xml
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas      1039 Jun  4 11:13 memory_monitor_summary.json
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas    295155 Jun  4 11:13 log.44871837._102210.job.log.tgz.1
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas      7700 Jun  4 11:14 heartbeat.json
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:14 boinc_mmap_file
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:14 wrapper_checkpoint.txt
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas      4612 Jun  4 11:14 pilotlog.txt
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas    430219 Jun  4 11:14 log.44871837._102210.job.log.1
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas       357 Jun  4 11:14 output.list
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:14 runtime_log
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas    747520 Jun  4 11:14 result.tar.gz
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 11:14 runtime_log.err
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas       652 Jun  4 11:14 IxSNDm2U1g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIynKDmYk4W8n.diag
[2025-06-04 11:14:25] -rw-r--r--. 1 boincer umatlas     21261 Jun  4 11:14 stderr.txt
[2025-06-04 11:14:25] HITS file was successfully produced:
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas 193645784 Jun  4 11:13 shared/HITS.pool.root.1
[2025-06-04 11:14:25]  *** Contents of shared directory: ***
[2025-06-04 11:14:25] total 408356
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas 223226794 Jun  4 10:00 ATLAS.root_0
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 11:14:25] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 10:00 input.tar.gz
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas 193645784 Jun  4 11:13 HITS.pool.root.1
[2025-06-04 11:14:25] -rw-------. 1 boincer umatlas    747520 Jun  4 11:14 result.tar.gz
11:14:27 (2130856): run_atlas exited; CPU time 28535.302303
11:14:27 (2130856): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN