Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:31 (1257569): wrapper (7.7.26015): starting
09:58:31 (1257569): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:58:31] Arguments: --nthreads 8
[2025-06-04 09:58:31] Threads: 8
[2025-06-04 09:58:31] Checking for CVMFS
[2025-06-04 09:58:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:58:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:58:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:58:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:58:32] 2.12.6.0 844411 23355 522624 146781 0 202 16702337 32935937 14252 16776704 0 115738326 99.645 109583350 27930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:58:32] CVMFS is ok
[2025-06-04 09:58:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:58:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:58:32] Further information can be found at the LHC@home message board.
[2025-06-04 09:58:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:58:32] Checking for apptainer binary...
[2025-06-04 09:58:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:58:32] Running /usr/bin/apptainer --version
[2025-06-04 09:58:32] apptainer version 1.4.1-1.el9
[2025-06-04 09:58:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:58:32] c6-6-8-3.aglt2.org
[2025-06-04 09:58:32] apptainer works
[2025-06-04 09:58:32] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:58:32] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:58:32] Starting ATLAS job with PandaID=6679190861
[2025-06-04 09:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:06:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:06:40]  is_altstaged=None
[2025-06-04 11:06:40]  is_tar=False
[2025-06-04 11:06:40]  lfn=log.45006595._055975.job.log.tgz.1
[2025-06-04 11:06:40]  mtime=0
[2025-06-04 11:06:40]  protocol_id=None
[2025-06-04 11:06:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:06:40]  replicas=None
[2025-06-04 11:06:40]  scope=mc23_13p6TeV
[2025-06-04 11:06:40]  status=None
[2025-06-04 11:06:40]  status_code=0
[2025-06-04 11:06:40]  storage_token=
[2025-06-04 11:06:40]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679190861/log.45006595._055975.job.log.tgz.1
[2025-06-04 11:06:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d7/log.45006595._055975.job.log.tgz.1
[2025-06-04 11:06:40]  workdir=None
[2025-06-04 11:06:40] ]
[2025-06-04 11:06:40] 2025-06-04 15:06:15,084 | INFO     | transferring file log.45006595._055975.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679190861/log.45006595._055975.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:06:40] 2025-06-04 15:06:15,085 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679190861/log.45006595._055975.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055975.job
[2025-06-04 11:06:40] 2025-06-04 15:06:15,104 | INFO     | adding to output.list: log.45006595._055975.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/d7/log.45006595._055975.job.log.tg
[2025-06-04 11:06:40] 2025-06-04 15:06:15,104 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:06:40] 2025-06-04 15:06:15,105 | INFO     | summary of transferred files:
[2025-06-04 11:06:40] 2025-06-04 15:06:15,105 | INFO     |  -- lfn=log.45006595._055975.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:06:40] 2025-06-04 15:06:15,105 | INFO     | stage-out finished correctly
[2025-06-04 11:06:40] 2025-06-04 15:06:15,272 | INFO     | number of running child processes to parent process 1268340: 1
[2025-06-04 11:06:40] 2025-06-04 15:06:15,272 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:06:40] 2025-06-04 15:06:15,590 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:06:40] 2025-06-04 15:06:16,686 | INFO     | job 6679190861 has state=finished
[2025-06-04 11:06:40] 2025-06-04 15:06:16,687 | INFO     | preparing for final server update for job 6679190861 in state='finished'
[2025-06-04 11:06:40] 2025-06-04 15:06:16,687 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:06:40] 2025-06-04 15:06:16,687 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:06:40] 2025-06-04 15:06:16,688 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:06:40] 2025-06-04 15:06:16,688 | INFO     | job 6679190861 has finished - writing final server update
[2025-06-04 11:06:40] 2025-06-04 15:06:16,688 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:06:40] 2025-06-04 15:06:16,706 | INFO     | executing command: lscpu
[2025-06-04 11:06:40] 2025-06-04 15:06:16,796 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:06:40] 2025-06-04 15:06:16,995 | INFO     | PID=1261209 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 11:06:40] 2025-06-04 15:06:16,996 | INFO     | .. there are 22 such processes running
[2025-06-04 11:06:40] 2025-06-04 15:06:17,776 | INFO     | monitor loop #299: job 0:6679190861 is in state 'finished'
[2025-06-04 11:06:40] 2025-06-04 15:06:17,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,871 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:06:40] 2025-06-04 15:06:19,872 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679190861/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,872 | INFO     | extracted standard info from prmon json
[2025-06-04 11:06:40] 2025-06-04 15:06:19,872 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:06:40] 2025-06-04 15:06:19,873 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:06:40] 2025-06-04 15:06:19,873 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:06:40] 2025-06-04 15:06:19,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | sum of deviations: 3884093625.9999995
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | mean x: 1749047619.0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | mean y: 2219662.86440678
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | -- intersect: -106702012269.66592
[2025-06-04 11:06:40] 2025-06-04 15:06:19,875 | INFO     | intersect: -106702012269.66592
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | chi2: 1.1308816598650302
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | -- intersect: -106702012269.66592
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | current memory leak: 61.01 B/s (using 59 data points, chi2=1.13)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | ..............................
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | . Timing measurements:
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | . get job = 0 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,876 | INFO     | . initial setup = 2 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | . payload setup = 5 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | . stage-in = 0 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | . payload execution = 4029 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | . stage-out = 1 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | . log creation = 0 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,877 | INFO     | ..............................
[2025-06-04 11:06:40] 2025-06-04 15:06:19,931 | INFO     | 
[2025-06-04 11:06:40] 2025-06-04 15:06:19,931 | INFO     | job summary report
[2025-06-04 11:06:40] 2025-06-04 15:06:19,931 | INFO     | --------------------------------------------------
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | PanDA job id: 6679190861
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | task id: 45006595
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | errors: (none)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | pilot state: finished 
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | transexitcode: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | exeerrorcode: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | exeerrordiag: 
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | exitcode: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | exitmsg: OK
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | cpuconsumptiontime: 26937 s
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | nevents: 400
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | neventsw: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:19,932 | INFO     | pid: 1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | pgrp: 1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | corecount: 8
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | event service: False
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | sizes: {0: 2397063, 1: 2397318, 4: 2397524, 12: 2397552, 4038: 2423346, 4039: 2432287, 4040: 2432471, 4044: 2432641}
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | --------------------------------------------------
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | 
[2025-06-04 11:06:40] 2025-06-04 15:06:19,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:06:40] 2025-06-04 15:06:19,954 | INFO     | job 6679190861 has completed (purged errors)
[2025-06-04 11:06:40] 2025-06-04 15:06:19,955 | INFO     | overall cleanup function is called
[2025-06-04 11:06:40] 2025-06-04 15:06:20,002 | INFO     | 4061s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 11:06:40] 2025-06-04 15:06:20,962 | INFO     | --- collectZombieJob: --- 10, [1268340]
[2025-06-04 11:06:40] 2025-06-04 15:06:20,962 | INFO     | zombie collector waiting for pid 1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:20,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:06:40] 2025-06-04 15:06:20,963 | INFO     | collected zombie processes
[2025-06-04 11:06:40] 2025-06-04 15:06:20,963 | INFO     | will attempt to kill all subprocesses of pid=1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:21,320 | INFO     | process IDs to be killed: [1268340] (in reverse order)
[2025-06-04 11:06:40] 2025-06-04 15:06:21,419 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:06:40] 2025-06-04 15:06:21,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:06:40] 2025-06-04 15:06:21,433 | INFO     | did not find any defunct processes belonging to 1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:21,446 | INFO     | did not find any defunct processes belonging to 1268340
[2025-06-04 11:06:40] 2025-06-04 15:06:21,447 | INFO     | ready for new job
[2025-06-04 11:06:40] 2025-06-04 15:06:21,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:06:40] 2025-06-04 15:06:21,448 | INFO     | **************************************
[2025-06-04 11:06:40] 2025-06-04 15:06:21,448 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:06:40] 2025-06-04 15:06:21,448 | INFO     | **************************************
[2025-06-04 11:06:40] 2025-06-04 15:06:21,448 | INFO     | 
[2025-06-04 11:06:40] 2025-06-04 15:06:21,465 | INFO     | architecture information:
[2025-06-04 11:06:40] 2025-06-04 15:06:21,465 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:06:40] 2025-06-04 15:06:21,480 | INFO     | cat /etc/os-release:
[2025-06-04 11:06:40] NAME="CentOS Linux"
[2025-06-04 11:06:40] VERSION="7 (Core)"
[2025-06-04 11:06:40] ID="centos"
[2025-06-04 11:06:40] ID_LIKE="rhel fedora"
[2025-06-04 11:06:40] VERSION_ID="7"
[2025-06-04 11:06:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:06:40] ANSI_COLOR="0;31"
[2025-06-04 11:06:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:06:40] HOME_URL="https://www.centos.org/"
[2025-06-04 11:06:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:06:40] 
[2025-06-04 11:06:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:06:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:06:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:06:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:06:40] 
[2025-06-04 11:06:40] 2025-06-04 15:06:21,480 | INFO     | **************************************
[2025-06-04 11:06:40] 2025-06-04 15:06:21,982 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 11:06:40] 2025-06-04 15:06:22,001 | INFO     | sufficient remaining disk space (95643762688 B)
[2025-06-04 11:06:40] 2025-06-04 15:06:22,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:06:40] 2025-06-04 15:06:22,002 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:06:40] 2025-06-04 15:06:22,002 | INFO     | update_server=False
[2025-06-04 11:06:40] 2025-06-04 15:06:22,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:06:40] 2025-06-04 15:06:22,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:06:40] 2025-06-04 15:06:22,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:40] 2025-06-04 15:06:22,004 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:06:40] 2025-06-04 15:06:22,004 | INFO     | aborting loop
[2025-06-04 11:06:40] 2025-06-04 15:06:22,004 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:06:40] 2025-06-04 15:06:22,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:06:40] 2025-06-04 15:06:22,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:06:40] 2025-06-04 15:06:22,140 | INFO     | all data control threads have been joined
[2025-06-04 11:06:40] 2025-06-04 15:06:22,643 | INFO     | all job control threads have been joined
[2025-06-04 11:06:40] 2025-06-04 15:06:23,008 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,009 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,146 | INFO     | [data] control thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:06:40] 2025-06-04 15:06:23,352 | INFO     | all payload control threads have been joined
[2025-06-04 11:06:40] 2025-06-04 15:06:23,368 | INFO     | [job] validate thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,393 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,649 | INFO     | [job] control thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,663 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,833 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:23,874 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:24,210 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:24,358 | INFO     | [payload] control thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:24,569 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:24,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:40] 2025-06-04 15:06:25,215 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:25,947 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:26,009 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:32,098 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:06:40] 2025-06-04 15:06:33,103 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:06:40] 2025-06-04 15:06:35,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134220212032)>', '<ExcThread(monitor, started 140133860873984)>']
[2025-06-04 11:06:40] 2025-06-04 15:06:35,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:06:40] 2025-06-04 15:06:35,063 | INFO     | [monitor] control thread has ended
[2025-06-04 11:06:40] 2025-06-04 15:06:40,060 | INFO     | all workflow threads have been joined
[2025-06-04 11:06:40] 2025-06-04 15:06:40,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:06:40] 2025-06-04 15:06:40,060 | INFO     | traces error code: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:40,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:06:40] 2025-06-04 15:06:40,217 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:06:40] 2025-06-04 15:06:40,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:06:40] 2025-06-04 15:06:40,221 [wrapper] pilotpid: 1261209
[2025-06-04 11:06:40] 2025-06-04 15:06:40,223 [wrapper] Pilot exit status: 0
[2025-06-04 11:06:40] 2025-06-04 15:06:40,231 [wrapper] pandaids: 6679190861
[2025-06-04 11:06:40] 2025-06-04 15:06:40,298 [wrapper] cleanup supervisor_pilot 1460057 1261210
[2025-06-04 11:06:40] 2025-06-04 15:06:40,300 [wrapper] Test setup, not cleaning
[2025-06-04 11:06:40] 2025-06-04 15:06:40,302 [wrapper] apfmon messages muted
[2025-06-04 11:06:40] 2025-06-04 15:06:40,304 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:06:40] 2025-06-04 15:06:40,306 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:06:40]  *** Error codes and diagnostics ***
[2025-06-04 11:06:40]     "exeErrorCode": 0,
[2025-06-04 11:06:40]     "exeErrorDiag": "",
[2025-06-04 11:06:40]     "pilotErrorCode": 0,
[2025-06-04 11:06:40]     "pilotErrorDiag": "",
[2025-06-04 11:06:40]  *** Listing of results directory ***
[2025-06-04 11:06:40] total 394100
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:51 queuedata.json
[2025-06-04 11:06:40] -rwx------. 1 boincer umatlas     37140 Jun  4 04:52 runpilot2-wrapper.sh
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:06:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:58 run_atlas
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:58 job.xml
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas 215649414 Jun  4 09:58 EVNT.45006593._000630.pool.root.1
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:58 start_atlas.sh
[2025-06-04 11:06:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:58 shared
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:58 input.tar.gz
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:58 boinc_lockfile
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 09:58 pandaJob.out
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas    986819 Jun  4 09:58 agis_schedconf.cvmfs.json
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:06:40] drwx------. 4 boincer umatlas      4096 Jun  4 09:58 pilot3
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 11:00 init_data.xml
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas 182647820 Jun  4 11:05 HITS.45006595._055975.pool.root.1
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:05 boinc_task_state.xml
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas      1038 Jun  4 11:06 memory_monitor_summary.json
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas        95 Jun  4 11:06 pilot_heartbeat.json
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas    309191 Jun  4 11:06 log.45006595._055975.job.log.tgz.1
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas      7718 Jun  4 11:06 heartbeat.json
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:06 boinc_mmap_file
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:06 wrapper_checkpoint.txt
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas      4548 Jun  4 11:06 pilotlog.txt
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas    404056 Jun  4 11:06 log.45006595._055975.job.log.1
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas       357 Jun  4 11:06 output.list
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:06 runtime_log
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas    737280 Jun  4 11:06 result.tar.gz
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas       651 Jun  4 11:06 tolNDmz1yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5qnKDmAR8CRn.diag
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 11:06 runtime_log.err
[2025-06-04 11:06:40] -rw-r--r--. 1 boincer umatlas     21470 Jun  4 11:06 stderr.txt
[2025-06-04 11:06:40] HITS file was successfully produced:
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas 182647820 Jun  4 11:05 shared/HITS.pool.root.1
[2025-06-04 11:06:40]  *** Contents of shared directory: ***
[2025-06-04 11:06:40] total 390208
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas 215649414 Jun  4 09:58 ATLAS.root_0
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:58 start_atlas.sh
[2025-06-04 11:06:40] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:58 input.tar.gz
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas 182647820 Jun  4 11:05 HITS.pool.root.1
[2025-06-04 11:06:40] -rw-------. 1 boincer umatlas    737280 Jun  4 11:06 result.tar.gz
11:06:42 (1257569): run_atlas exited; CPU time 27090.267556
11:06:42 (1257569): called boinc_finish(0)

</stderr_txt>
]]>

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