Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:50 (2709943): wrapper (7.7.26015): starting
09:56:50 (2709943): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:56:50] Arguments: --nthreads 8
[2025-06-04 09:56:50] Threads: 8
[2025-06-04 09:56:50] Checking for CVMFS
[2025-06-04 09:56:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:56:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:56:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:56:50] 2.12.6.0 229055 735 73936 146781 0 187 2539504 40960000 5392 16776704 0 4434999 99.850 874164 60320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:56:50] CVMFS is ok
[2025-06-04 09:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:56:50] Further information can be found at the LHC@home message board.
[2025-06-04 09:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:56:50] Checking for apptainer binary...
[2025-06-04 09:56:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:56:50] Running /usr/bin/apptainer --version
[2025-06-04 09:56:50] apptainer version 1.4.1-1.el9
[2025-06-04 09:56:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:56:50] c6-5-7-4.aglt2.org
[2025-06-04 09:56:50] apptainer works
[2025-06-04 09:56:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:56:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:56:50] Starting ATLAS job with PandaID=6679032390
[2025-06-04 09:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:08:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:08:00]  is_altstaged=None
[2025-06-04 11:08:00]  is_tar=False
[2025-06-04 11:08:00]  lfn=log.45006595._055796.job.log.tgz.1
[2025-06-04 11:08:00]  mtime=0
[2025-06-04 11:08:00]  protocol_id=None
[2025-06-04 11:08:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:08:00]  replicas=None
[2025-06-04 11:08:00]  scope=mc23_13p6TeV
[2025-06-04 11:08:00]  status=None
[2025-06-04 11:08:00]  status_code=0
[2025-06-04 11:08:00]  storage_token=
[2025-06-04 11:08:00]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6679032390/log.45006595._055796.job.log.tgz.1
[2025-06-04 11:08:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/b7/log.45006595._055796.job.log.tgz.1
[2025-06-04 11:08:00]  workdir=None
[2025-06-04 11:08:00] ]
[2025-06-04 11:08:00] 2025-06-04 15:07:34,149 | INFO     | transferring file log.45006595._055796.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6679032390/log.45006595._055796.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:08:00] 2025-06-04 15:07:34,149 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6679032390/log.45006595._055796.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._055796.job
[2025-06-04 11:08:00] 2025-06-04 15:07:34,161 | INFO     | adding to output.list: log.45006595._055796.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/b7/log.45006595._055796.job.log.tg
[2025-06-04 11:08:00] 2025-06-04 15:07:34,162 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:08:00] 2025-06-04 15:07:34,162 | INFO     | summary of transferred files:
[2025-06-04 11:08:00] 2025-06-04 15:07:34,162 | INFO     |  -- lfn=log.45006595._055796.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:08:00] 2025-06-04 15:07:34,162 | INFO     | stage-out finished correctly
[2025-06-04 11:08:00] 2025-06-04 15:07:35,532 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:08:00] 2025-06-04 15:07:36,477 | INFO     | monitor loop #319: job 0:6679032390 is in state 'finished'
[2025-06-04 11:08:00] 2025-06-04 15:07:36,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | job 6679032390 has state=finished
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | preparing for final server update for job 6679032390 in state='finished'
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:08:00] 2025-06-04 15:07:36,733 | INFO     | job 6679032390 has finished - writing final server update
[2025-06-04 11:08:00] 2025-06-04 15:07:36,734 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:08:00] 2025-06-04 15:07:36,748 | INFO     | executing command: lscpu
[2025-06-04 11:08:00] 2025-06-04 15:07:36,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:08:00] 2025-06-04 15:07:38,980 | INFO     | monitor loop #320: job 0:6679032390 is in state 'finished'
[2025-06-04 11:08:00] 2025-06-04 15:07:38,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,227 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:08:00] 2025-06-04 15:07:39,228 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6679032390/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,228 | INFO     | extracted standard info from prmon json
[2025-06-04 11:08:00] 2025-06-04 15:07:39,228 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:08:00] 2025-06-04 15:07:39,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:08:00] 2025-06-04 15:07:39,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:08:00] 2025-06-04 15:07:39,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | sum of deviations: 7591666672.0
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | mean x: 1749047608.5
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | mean y: 2112097.129032258
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | -- intersect: -179718655279.0742
[2025-06-04 11:08:00] 2025-06-04 15:07:39,230 | INFO     | intersect: -179718655279.0742
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | chi2: 0.930703732831118
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | -- intersect: -179718655279.0742
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | current memory leak: 102.75 B/s (using 62 data points, chi2=0.93)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | ..............................
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . Timing measurements:
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . get job = 0 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . initial setup = 2 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . payload setup = 5 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . stage-in = 0 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . payload execution = 4210 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . stage-out = 0 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | . log creation = 0 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,231 | INFO     | ..............................
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | 
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | job summary report
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | --------------------------------------------------
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | PanDA job id: 6679032390
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | task id: 45006595
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | errors: (none)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | pilot state: finished 
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | transexitcode: 0
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | exeerrorcode: 0
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | exeerrordiag: 
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | exitcode: 0
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | exitmsg: OK
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | cpuconsumptiontime: 28417 s
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | nevents: 400
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | neventsw: 0
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | pid: 2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | pgrp: 2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | corecount: 8
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | event service: False
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 4220: 2432341, 4222: 2432341, 4225: 2432511}
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | --------------------------------------------------
[2025-06-04 11:08:00] 2025-06-04 15:07:39,527 | INFO     | 
[2025-06-04 11:08:00] 2025-06-04 15:07:39,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | job 6679032390 has completed (purged errors)
[2025-06-04 11:08:00] 2025-06-04 15:07:39,541 | INFO     | overall cleanup function is called
[2025-06-04 11:08:00] 2025-06-04 15:07:40,549 | INFO     | --- collectZombieJob: --- 10, [2720645]
[2025-06-04 11:08:00] 2025-06-04 15:07:40,549 | INFO     | zombie collector waiting for pid 2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:40,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:08:00] 2025-06-04 15:07:40,549 | INFO     | collected zombie processes
[2025-06-04 11:08:00] 2025-06-04 15:07:40,549 | INFO     | will attempt to kill all subprocesses of pid=2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:40,675 | INFO     | process IDs to be killed: [2720645] (in reverse order)
[2025-06-04 11:08:00] 2025-06-04 15:07:40,714 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:08:00] 2025-06-04 15:07:40,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:08:00] 2025-06-04 15:07:40,718 | INFO     | did not find any defunct processes belonging to 2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:40,722 | INFO     | did not find any defunct processes belonging to 2720645
[2025-06-04 11:08:00] 2025-06-04 15:07:40,722 | INFO     | ready for new job
[2025-06-04 11:08:00] 2025-06-04 15:07:40,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:08:00] 2025-06-04 15:07:40,723 | INFO     | **************************************
[2025-06-04 11:08:00] 2025-06-04 15:07:40,723 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:08:00] 2025-06-04 15:07:40,723 | INFO     | **************************************
[2025-06-04 11:08:00] 2025-06-04 15:07:40,723 | INFO     | 
[2025-06-04 11:08:00] 2025-06-04 15:07:40,736 | INFO     | architecture information:
[2025-06-04 11:08:00] 2025-06-04 15:07:40,737 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:08:00] 2025-06-04 15:07:40,745 | INFO     | cat /etc/os-release:
[2025-06-04 11:08:00] NAME="CentOS Linux"
[2025-06-04 11:08:00] VERSION="7 (Core)"
[2025-06-04 11:08:00] ID="centos"
[2025-06-04 11:08:00] ID_LIKE="rhel fedora"
[2025-06-04 11:08:00] VERSION_ID="7"
[2025-06-04 11:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:08:00] ANSI_COLOR="0;31"
[2025-06-04 11:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:08:00] HOME_URL="https://www.centos.org/"
[2025-06-04 11:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:08:00] 
[2025-06-04 11:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:08:00] 
[2025-06-04 11:08:00] 2025-06-04 15:07:40,745 | INFO     | **************************************
[2025-06-04 11:08:00] 2025-06-04 15:07:41,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | INFO     | sufficient remaining disk space (74086088704 B)
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | INFO     | update_server=False
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:08:00] 2025-06-04 15:07:41,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:08:00] 2025-06-04 15:07:41,483 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:08:00] 2025-06-04 15:07:41,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:08:00] 2025-06-04 15:07:41,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:08:00] 2025-06-04 15:07:41,483 | INFO     | will abort loop
[2025-06-04 11:08:00] 2025-06-04 15:07:41,544 | INFO     | all data control threads have been joined
[2025-06-04 11:08:00] 2025-06-04 15:07:41,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:08:00] 2025-06-04 15:07:41,586 | INFO     | all payload control threads have been joined
[2025-06-04 11:08:00] 2025-06-04 15:07:41,749 | INFO     | PID=2713566 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 11:08:00] 2025-06-04 15:07:41,749 | INFO     | .. there are 3 such processes running
[2025-06-04 11:08:00] 2025-06-04 15:07:41,749 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:08:00] 2025-06-04 15:07:41,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:08:00] 2025-06-04 15:07:41,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:08:00] 2025-06-04 15:07:42,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:08:00] 2025-06-04 15:07:42,263 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,263 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,290 | INFO     | all job control threads have been joined
[2025-06-04 11:08:00] 2025-06-04 15:07:42,351 | INFO     | [job] validate thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,360 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,487 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,487 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,549 | INFO     | [data] control thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,591 | INFO     | [payload] control thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:42,729 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:43,169 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:43,295 | INFO     | [job] control thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:43,573 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:43,658 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:44,223 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:45,588 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:51,938 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:08:00] 2025-06-04 15:07:52,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:08:00] 2025-06-04 15:07:55,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058669041472)>', '<ExcThread(monitor, started 140058162075392)>']
[2025-06-04 11:08:00] 2025-06-04 15:07:55,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:08:00] 2025-06-04 15:07:55,820 | INFO     | [monitor] control thread has ended
[2025-06-04 11:08:00] 2025-06-04 15:08:00,045 | INFO     | all workflow threads have been joined
[2025-06-04 11:08:00] 2025-06-04 15:08:00,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:08:00] 2025-06-04 15:08:00,046 | INFO     | traces error code: 0
[2025-06-04 11:08:00] 2025-06-04 15:08:00,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:08:00] 2025-06-04 15:08:00,157 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:08:00] 2025-06-04 15:08:00,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:08:00] 2025-06-04 15:08:00,160 [wrapper] pilotpid: 2713566
[2025-06-04 11:08:00] 2025-06-04 15:08:00,162 [wrapper] Pilot exit status: 0
[2025-06-04 11:08:00] 2025-06-04 15:08:00,168 [wrapper] pandaids: 6679032390
[2025-06-04 11:08:00] 2025-06-04 15:08:00,193 [wrapper] cleanup supervisor_pilot 2853334 2713567
[2025-06-04 11:08:00] 2025-06-04 15:08:00,195 [wrapper] Test setup, not cleaning
[2025-06-04 11:08:00] 2025-06-04 15:08:00,197 [wrapper] apfmon messages muted
[2025-06-04 11:08:00] 2025-06-04 15:08:00,199 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:08:00] 2025-06-04 15:08:00,200 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:08:00]  *** Error codes and diagnostics ***
[2025-06-04 11:08:00]     "exeErrorCode": 0,
[2025-06-04 11:08:00]     "exeErrorDiag": "",
[2025-06-04 11:08:00]     "pilotErrorCode": 0,
[2025-06-04 11:08:00]     "pilotErrorDiag": "",
[2025-06-04 11:08:00]  *** Listing of results directory ***
[2025-06-04 11:08:00] total 392008
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:43 queuedata.json
[2025-06-04 11:08:00] -rwx------. 1 boincer umatlas     37140 Jun  4 04:44 runpilot2-wrapper.sh
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:08:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:56 run_atlas
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:56 job.xml
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas 215351912 Jun  4 09:56 EVNT.45006593._000998.pool.root.1
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:56 start_atlas.sh
[2025-06-04 11:08:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:56 shared
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:56 input.tar.gz
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:56 boinc_lockfile
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 09:56 pandaJob.out
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas    986819 Jun  4 09:56 agis_schedconf.cvmfs.json
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:08:00] drwx------. 4 boincer umatlas      4096 Jun  4 09:56 pilot3
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 11:00 init_data.xml
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas        95 Jun  4 11:07 pilot_heartbeat.json
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:07 boinc_task_state.xml
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas 180790428 Jun  4 11:07 HITS.45006595._055796.pool.root.1
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas      1032 Jun  4 11:07 memory_monitor_summary.json
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas    291120 Jun  4 11:07 log.45006595._055796.job.log.tgz.1
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas      7708 Jun  4 11:07 heartbeat.json
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:07 boinc_mmap_file
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:07 wrapper_checkpoint.txt
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas      5005 Jun  4 11:08 pilotlog.txt
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas    427209 Jun  4 11:08 log.45006595._055796.job.log.1
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas       357 Jun  4 11:08 output.list
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:08 runtime_log
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas    737280 Jun  4 11:08 result.tar.gz
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 11:08 runtime_log.err
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas       651 Jun  4 11:08 AGLLDmzuyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdonKDmQNki7n.diag
[2025-06-04 11:08:00] -rw-r--r--. 1 boincer umatlas     21407 Jun  4 11:08 stderr.txt
[2025-06-04 11:08:00] HITS file was successfully produced:
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas 180790428 Jun  4 11:07 shared/HITS.pool.root.1
[2025-06-04 11:08:00]  *** Contents of shared directory: ***
[2025-06-04 11:08:00] total 388108
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas 215351912 Jun  4 09:56 ATLAS.root_0
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:56 start_atlas.sh
[2025-06-04 11:08:00] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:56 input.tar.gz
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas 180790428 Jun  4 11:07 HITS.pool.root.1
[2025-06-04 11:08:00] -rw-------. 1 boincer umatlas    737280 Jun  4 11:08 result.tar.gz
11:08:01 (2709943): run_atlas exited; CPU time 28472.278267
11:08:01 (2709943): called boinc_finish(0)

</stderr_txt>
]]>

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