Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:44 (2968533): wrapper (7.7.26015): starting
23:00:44 (2968533): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:00:44] Arguments: --nthreads 12
[2025-06-04 23:00:44] Threads: 12
[2025-06-04 23:00:44] Checking for CVMFS
[2025-06-04 23:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:00:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:00:47] 2.12.7.0 9268 8949 225684 146793 1 397 42676728 46080000 39144 130560 0 57620253 99.939 10627030 19865 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 23:00:47] CVMFS is ok
[2025-06-04 23:00:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:00:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:00:47] Further information can be found at the LHC@home message board.
[2025-06-04 23:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:00:47] Checking for apptainer binary...
[2025-06-04 23:00:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:00:47] Running /usr/bin/apptainer --version
[2025-06-04 23:00:47] apptainer version 1.4.1-1.el9
[2025-06-04 23:00:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:01:48] mff2104.farm.particle.cz
[2025-06-04 23:01:48] apptainer works
[2025-06-04 23:01:48] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:01:48] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:01:48] Starting ATLAS job with PandaID=6679100202
[2025-06-04 23:01:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:40:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:40:07] 2025-06-04 22:39:02,683 | INFO     | executing command: lscpu
[2025-06-05 00:40:07] 2025-06-04 22:39:02,753 | INFO     | monitor loop #395: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:02,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:02,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:40:07] 2025-06-04 22:39:05,257 | INFO     | monitor loop #396: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:05,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:07,762 | INFO     | monitor loop #397: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:07,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:10,267 | INFO     | monitor loop #398: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:10,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:12,772 | INFO     | monitor loop #399: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:12,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:13,853 | INFO     | PID=3006439 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 00:40:07] 2025-06-04 22:39:13,853 | INFO     | .. there are 92 such processes running
[2025-06-05 00:40:07] 2025-06-04 22:39:15,279 | INFO     | monitor loop #400: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:15,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:17,784 | INFO     | monitor loop #401: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:17,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:20,289 | INFO     | monitor loop #402: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:20,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:22,797 | INFO     | monitor loop #403: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:22,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:25,302 | INFO     | monitor loop #404: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:25,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:27,807 | INFO     | monitor loop #405: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:27,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:30,318 | INFO     | monitor loop #406: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:30,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:32,824 | INFO     | monitor loop #407: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:32,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:35,331 | INFO     | monitor loop #408: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:35,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:36,968 | INFO     | PID=3006439 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:40:07] 2025-06-04 22:39:36,968 | INFO     | .. there are 92 such processes running
[2025-06-05 00:40:07] 2025-06-04 22:39:37,837 | INFO     | monitor loop #409: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:37,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:40,342 | INFO     | monitor loop #410: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:40,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:42,851 | INFO     | monitor loop #411: job 0:6679100202 is in state 'finished'
[2025-06-05 00:40:07] 2025-06-04 22:39:42,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:40:07] 2025-06-04 22:39:44,291 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6679100202/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,292 | INFO     | extracted standard info from prmon json
[2025-06-05 00:40:07] 2025-06-04 22:39:44,292 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:40:07] 2025-06-04 22:39:44,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:40:07] 2025-06-04 22:39:44,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:40:07] 2025-06-04 22:39:44,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:40:07] 2025-06-04 22:39:44,299 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:40:07] 2025-06-04 22:39:44,299 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,299 | INFO     | sum of deviations: 14721283964.0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,299 | INFO     | mean x: 1749074040.5
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | mean y: 2628603.0714285714
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | -- intersect: -140117057588.4758
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | intersect: -140117057588.4758
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | chi2: 1.1488682613568875
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | -- intersect: -140117057588.4758
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | current memory leak: 80.11 B/s (using 84 data points, chi2=1.15)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,300 | INFO     | ..............................
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . Timing measurements:
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . get job = 0 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . initial setup = 7 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . payload setup = 71 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . stage-in = 0 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . payload execution = 5573 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . stage-out = 1 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | . log creation = 0 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,301 | INFO     | ..............................
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | 
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | job summary report
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | --------------------------------------------------
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | PanDA job id: 6679100202
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | task id: 45006595
[2025-06-05 00:40:07] 2025-06-04 22:39:44,425 | INFO     | errors: (none)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | pilot state: finished 
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | transexitcode: 0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | exeerrorcode: 0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | exeerrordiag: 
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | exitcode: 0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | exitmsg: OK
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | cpuconsumptiontime: 35196 s
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | nevents: 400
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | neventsw: 0
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | pid: 3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:44,426 | INFO     | pgrp: 3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | corecount: 12
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | event service: False
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | sizes: {0: 2397122, 1: 2397321, 11: 2397321, 22: 2397349, 33: 2397377, 42: 2397639, 44: 2397823, 5649: 2424378, 5652: 2433321, 5654: 2433377, 5697: 2433547}
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | --------------------------------------------------
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | 
[2025-06-05 00:40:07] 2025-06-04 22:39:44,427 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-06-05 00:40:07] 2025-06-04 22:39:44,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | job 6679100202 has completed (purged errors)
[2025-06-05 00:40:07] 2025-06-04 22:39:44,645 | INFO     | overall cleanup function is called
[2025-06-05 00:40:07] 2025-06-04 22:39:45,668 | INFO     | --- collectZombieJob: --- 10, [3065989]
[2025-06-05 00:40:07] 2025-06-04 22:39:45,668 | INFO     | zombie collector waiting for pid 3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:45,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:40:07] 2025-06-04 22:39:45,668 | INFO     | collected zombie processes
[2025-06-05 00:40:07] 2025-06-04 22:39:45,668 | INFO     | will attempt to kill all subprocesses of pid=3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:46,687 | INFO     | process IDs to be killed: [3065989] (in reverse order)
[2025-06-05 00:40:07] 2025-06-04 22:39:47,230 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:40:07] 2025-06-04 22:39:47,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:40:07] 2025-06-04 22:39:47,271 | INFO     | did not find any defunct processes belonging to 3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:47,313 | INFO     | did not find any defunct processes belonging to 3065989
[2025-06-05 00:40:07] 2025-06-04 22:39:47,314 | INFO     | ready for new job
[2025-06-05 00:40:07] 2025-06-04 22:39:47,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:40:07] 2025-06-04 22:39:47,315 | INFO     | **************************************
[2025-06-05 00:40:07] 2025-06-04 22:39:47,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:40:07] 2025-06-04 22:39:47,315 | INFO     | **************************************
[2025-06-05 00:40:07] 2025-06-04 22:39:47,316 | INFO     | 
[2025-06-05 00:40:07] 2025-06-04 22:39:47,321 | INFO     | architecture information:
[2025-06-05 00:40:07] 2025-06-04 22:39:47,334 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:40:07] 2025-06-04 22:39:47,388 | INFO     | cat /etc/os-release:
[2025-06-05 00:40:07] NAME="CentOS Linux"
[2025-06-05 00:40:07] VERSION="7 (Core)"
[2025-06-05 00:40:07] ID="centos"
[2025-06-05 00:40:07] ID_LIKE="rhel fedora"
[2025-06-05 00:40:07] VERSION_ID="7"
[2025-06-05 00:40:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:40:07] ANSI_COLOR="0;31"
[2025-06-05 00:40:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:40:07] HOME_URL="https://www.centos.org/"
[2025-06-05 00:40:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:40:07] 
[2025-06-05 00:40:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:40:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:40:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:40:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:40:07] 
[2025-06-05 00:40:07] 2025-06-04 22:39:47,388 | INFO     | **************************************
[2025-06-05 00:40:07] 2025-06-04 22:39:47,892 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-06-05 00:40:07] 2025-06-04 22:39:48,012 | INFO     | sufficient remaining disk space (1663150587904 B)
[2025-06-05 00:40:07] 2025-06-04 22:39:48,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:40:07] 2025-06-04 22:39:48,012 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:40:07] 2025-06-04 22:39:48,012 | INFO     | update_server=False
[2025-06-05 00:40:07] 2025-06-04 22:39:48,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:40:07] 2025-06-04 22:39:48,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:40:07] 2025-06-04 22:39:48,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:40:07] 2025-06-04 22:39:48,196 | INFO     | all data control threads have been joined
[2025-06-05 00:40:07] 2025-06-04 22:39:48,608 | INFO     | all payload control threads have been joined
[2025-06-05 00:40:07] 2025-06-04 22:39:48,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:40:07] 2025-06-04 22:39:48,876 | INFO     | aborting loop
[2025-06-05 00:40:07] 2025-06-04 22:39:49,017 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:40:07] 2025-06-04 22:39:49,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:40:07] 2025-06-04 22:39:49,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:40:07] 2025-06-04 22:39:49,022 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,196 | INFO     | all job control threads have been joined
[2025-06-05 00:40:07] 2025-06-04 22:39:49,202 | INFO     | [data] control thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:40:07] 2025-06-04 22:39:49,614 | INFO     | [payload] control thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,653 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,862 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,881 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:49,897 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,020 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,082 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,179 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,191 | INFO     | [job] validate thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,202 | INFO     | [job] control thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,316 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:50,449 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:52,177 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:39:58,413 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:40:07] 2025-06-04 22:39:59,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:40:07] 2025-06-04 22:40:01,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644983940928)>', '<ExcThread(monitor, started 140644257355520)>']
[2025-06-05 00:40:07] 2025-06-04 22:40:02,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:40:07] 2025-06-04 22:40:02,101 | INFO     | [monitor] control thread has ended
[2025-06-05 00:40:07] 2025-06-04 22:40:06,292 | INFO     | all workflow threads have been joined
[2025-06-05 00:40:07] 2025-06-04 22:40:06,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:40:07] 2025-06-04 22:40:06,294 | INFO     | traces error code: 0
[2025-06-05 00:40:07] 2025-06-04 22:40:06,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:40:07] 2025-06-04 22:40:06,629 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:40:07] 2025-06-04 22:40:06,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:40:07] 2025-06-04 22:40:06,712 [wrapper] pilotpid: 3006439
[2025-06-05 00:40:07] 2025-06-04 22:40:06,739 [wrapper] Pilot exit status: 0
[2025-06-05 00:40:07] 2025-06-04 22:40:06,857 [wrapper] pandaids: 6679100202
[2025-06-05 00:40:07] 2025-06-04 22:40:07,288 [wrapper] cleanup supervisor_pilot 3779457 3006440
[2025-06-05 00:40:07] 2025-06-04 22:40:07,302 [wrapper] Test setup, not cleaning
[2025-06-05 00:40:07] 2025-06-04 22:40:07,315 [wrapper] apfmon messages muted
[2025-06-05 00:40:07] 2025-06-04 22:40:07,358 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:40:07] 2025-06-04 22:40:07,396 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:40:07]  *** Error codes and diagnostics ***
[2025-06-05 00:40:07]     "exeErrorCode": 0,
[2025-06-05 00:40:07]     "exeErrorDiag": "",
[2025-06-05 00:40:07]     "pilotErrorCode": 0,
[2025-06-05 00:40:07]     "pilotErrorDiag": "",
[2025-06-05 00:40:07]  *** Listing of results directory ***
[2025-06-05 00:40:08] total 390376
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc    495897 Jun  4 10:46 pilot3.tar.gz
[2025-06-05 00:40:08] -rwx------ 1 boinc boinc     37140 Jun  4 10:48 runpilot2-wrapper.sh
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc      5111 Jun  4 10:48 queuedata.json
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:40:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:00 run_atlas
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:00 job.xml
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc      6664 Jun  4 23:00 init_data.xml
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc 216165777 Jun  4 23:00 EVNT.45006593._001320.pool.root.1
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:00 start_atlas.sh
[2025-06-05 00:40:08] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:00 shared
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc    508883 Jun  4 23:00 input.tar.gz
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:00 boinc_lockfile
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc      2525 Jun  4 23:01 pandaJob.out
[2025-06-05 00:40:08] -rw------- 1 boinc boinc    987032 Jun  4 23:03 agis_schedconf.cvmfs.json
[2025-06-05 00:40:08] -rw------- 1 boinc boinc   1598969 Jun  4 23:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:40:08] drwx------ 4 boinc boinc      4096 Jun  4 23:03 pilot3
[2025-06-05 00:40:08] -rw------- 1 boinc boinc 177947983 Jun  5 00:38 HITS.45006595._055838.pool.root.1
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:38 boinc_task_state.xml
[2025-06-05 00:40:08] -rw------- 1 boinc boinc      1024 Jun  5 00:38 memory_monitor_summary.json
[2025-06-05 00:40:08] -rw------- 1 boinc boinc        95 Jun  5 00:38 pilot_heartbeat.json
[2025-06-05 00:40:08] -rw------- 1 boinc boinc    384536 Jun  5 00:38 log.45006595._055838.job.log.tgz.1
[2025-06-05 00:40:08] -rw------- 1 boinc boinc      7698 Jun  5 00:39 heartbeat.json
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc        26 Jun  5 00:40 wrapper_checkpoint.txt
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:40 boinc_mmap_file
[2025-06-05 00:40:08] -rw------- 1 boinc boinc      4428 Jun  5 00:40 pilotlog.txt
[2025-06-05 00:40:08] -rw------- 1 boinc boinc    514739 Jun  5 00:40 log.45006595._055838.job.log.1
[2025-06-05 00:40:08] -rw------- 1 boinc boinc       357 Jun  5 00:40 output.list
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:40 runtime_log
[2025-06-05 00:40:08] -rw------- 1 boinc boinc    921600 Jun  5 00:40 result.tar.gz
[2025-06-05 00:40:08] -rw------- 1 boinc boinc       663 Jun  5 00:40 lrFKDmVyyg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmryaKDmlcYzJm.diag
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc      8720 Jun  5 00:40 runtime_log.err
[2025-06-05 00:40:08] -rw-r--r-- 1 boinc boinc     22516 Jun  5 00:40 stderr.txt
[2025-06-05 00:40:08] HITS file was successfully produced:
[2025-06-05 00:40:08] -rw------- 1 boinc boinc 177947983 Jun  5 00:38 shared/HITS.pool.root.1
[2025-06-05 00:40:08]  *** Contents of shared directory: ***
[2025-06-05 00:40:08] total 386304
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc 216165777 Jun  4 23:00 ATLAS.root_0
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:00 start_atlas.sh
[2025-06-05 00:40:08] -rw-r--r-- 2 boinc boinc    508883 Jun  4 23:00 input.tar.gz
[2025-06-05 00:40:08] -rw------- 1 boinc boinc 177947983 Jun  5 00:38 HITS.pool.root.1
[2025-06-05 00:40:08] -rw------- 1 boinc boinc    921600 Jun  5 00:40 result.tar.gz
00:40:09 (2968533): run_atlas exited; CPU time 35536.763326
00:40:09 (2968533): called boinc_finish(0)

</stderr_txt>
]]>

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