Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:55:05 (1443912): wrapper (7.7.26015): starting
00:55:05 (1443912): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 00:55:05] Arguments: --nthreads 3
[2025-06-05 00:55:05] Threads: 3
[2025-06-05 00:55:05] Checking for CVMFS
[2025-06-05 00:55:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:55:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:55:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:55:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:55:05] 2.9.2.0 406019 3121 84648 146797 3 56 31911137 36864001 0 130560 0 2801932 99.992 758697 47834 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 00:55:05] CVMFS is ok
[2025-06-05 00:55:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:55:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:55:05] Further information can be found at the LHC@home message board.
[2025-06-05 00:55:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:55:05] Checking for apptainer binary...
[2025-06-05 00:55:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:55:05] Running /usr/bin/apptainer --version
[2025-06-05 00:55:05] apptainer version 1.3.6-6.1
[2025-06-05 00:55:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:55:05] thA327
[2025-06-05 00:55:05] apptainer works
[2025-06-05 00:55:05] Set ATHENA_PROC_NUMBER=3
[2025-06-05 00:55:05] Set ATHENA_CORE_NUMBER=3
[2025-06-05 00:55:05] Starting ATLAS job with PandaID=6678215898
[2025-06-05 00:55:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:09:33]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:09:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 02:09:33]  is_altstaged=None
[2025-06-05 02:09:33]  is_tar=False
[2025-06-05 02:09:33]  lfn=log.45006595._049120.job.log.tgz.1
[2025-06-05 02:09:33]  mtime=0
[2025-06-05 02:09:33]  protocol_id=None
[2025-06-05 02:09:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 02:09:33]  replicas=None
[2025-06-05 02:09:33]  scope=mc23_13p6TeV
[2025-06-05 02:09:33]  status=None
[2025-06-05 02:09:33]  status_code=0
[2025-06-05 02:09:33]  storage_token=
[2025-06-05 02:09:33]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678215898/log.45006595._049120.job.log.tgz.1
[2025-06-05 02:09:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/44/log.45006595._049120.job.log.tgz.1
[2025-06-05 02:09:33]  workdir=None
[2025-06-05 02:09:33] ]
[2025-06-05 02:09:33] 2025-06-05 00:09:10,047 | INFO     | transferring file log.45006595._049120.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678215898/log.45006595._049120.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 02:09:33] 2025-06-05 00:09:10,047 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678215898/log.45006595._049120.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0491
[2025-06-05 02:09:33] 2025-06-05 00:09:10,060 | INFO     | adding to output.list: log.45006595._049120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/44/log.45006595._049120.job.log.tg
[2025-06-05 02:09:33] 2025-06-05 00:09:10,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 02:09:33] 2025-06-05 00:09:10,060 | INFO     | summary of transferred files:
[2025-06-05 02:09:33] 2025-06-05 00:09:10,060 | INFO     |  -- lfn=log.45006595._049120.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 02:09:33] 2025-06-05 00:09:10,060 | INFO     | stage-out finished correctly
[2025-06-05 02:09:33] 2025-06-05 00:09:13,381 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 02:09:33] 2025-06-05 00:09:15,171 | INFO     | PID=1447548 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 02:09:33] 2025-06-05 00:09:15,300 | WARNING  | process 1454042 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 02:09:33] 2025-06-05 00:09:15,300 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678215898/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:09:33] 2025-06-05 00:09:15,335 | INFO     | number of running child processes to parent process 1454042: 1
[2025-06-05 02:09:33] 2025-06-05 00:09:15,335 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:09:33] 2025-06-05 00:09:15,491 | INFO     | job 6678215898 has state=finished
[2025-06-05 02:09:33] 2025-06-05 00:09:15,491 | INFO     | preparing for final server update for job 6678215898 in state='finished'
[2025-06-05 02:09:33] 2025-06-05 00:09:15,491 | INFO     | this job has now completed (state=finished)
[2025-06-05 02:09:33] 2025-06-05 00:09:15,491 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 02:09:33] 2025-06-05 00:09:15,491 | INFO     | log transfer has been attempted: DONE
[2025-06-05 02:09:33] 2025-06-05 00:09:15,492 | INFO     | job 6678215898 has finished - writing final server update
[2025-06-05 02:09:33] 2025-06-05 00:09:15,492 | INFO     | total number of processed events: 400 (read)
[2025-06-05 02:09:33] 2025-06-05 00:09:15,493 | INFO     | executing command: lscpu
[2025-06-05 02:09:33] 2025-06-05 00:09:15,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 02:09:33] 2025-06-05 00:09:17,838 | INFO     | monitor loop #343: job 0:6678215898 is in state 'finished'
[2025-06-05 02:09:33] 2025-06-05 00:09:17,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,576 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678215898/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | INFO     | extracted standard info from prmon json
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:09:33] 2025-06-05 00:09:19,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | sum of square deviations: 89127252.5
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | sum of deviations: -4354980930.0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | mean x: 1749080019.5
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | mean y: 2399829.9696969697
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | -- intersect: 85466833168.88058
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | intersect: 85466833168.88058
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | chi2: 0.05232015799396297
[2025-06-05 02:09:33] 2025-06-05 00:09:19,578 | INFO     | -- intersect: 85466833168.88058
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | current memory leak: -48.86 B/s (using 66 data points, chi2=0.05)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | ..............................
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . Timing measurements:
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . get job = 0 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . initial setup = 1 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . payload setup = 3 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . stage-in = 0 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . payload execution = 4417 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . stage-out = 0 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | . log creation = 0 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,579 | INFO     | ..............................
[2025-06-05 02:09:33] 2025-06-05 00:09:19,610 | INFO     | 
[2025-06-05 02:09:33] 2025-06-05 00:09:19,610 | INFO     | job summary report
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | --------------------------------------------------
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | PanDA job id: 6678215898
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | task id: 45006595
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | errors: (none)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | pilot state: finished 
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | transexitcode: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | exeerrorcode: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | exeerrordiag: 
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | exitcode: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | exitmsg: OK
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | cpuconsumptiontime: 12644 s
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | nevents: 400
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | neventsw: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | pid: 1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | pgrp: 1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | corecount: 3
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | event service: False
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | sizes: {0: 2397344, 2: 2397550, 10: 2397578, 4425: 2432656, 4429: 2432656, 4435: 2432826}
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | --------------------------------------------------
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | 
[2025-06-05 02:09:33] 2025-06-05 00:09:19,611 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:09:33] 2025-06-05 00:09:19,625 | INFO     | job 6678215898 has completed (purged errors)
[2025-06-05 02:09:33] 2025-06-05 00:09:19,625 | INFO     | overall cleanup function is called
[2025-06-05 02:09:33] 2025-06-05 00:09:20,631 | INFO     | --- collectZombieJob: --- 10, [1454042]
[2025-06-05 02:09:33] 2025-06-05 00:09:20,632 | INFO     | zombie collector waiting for pid 1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:20,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:09:33] 2025-06-05 00:09:20,632 | INFO     | collected zombie processes
[2025-06-05 02:09:33] 2025-06-05 00:09:20,632 | INFO     | will attempt to kill all subprocesses of pid=1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:20,673 | INFO     | process IDs to be killed: [1454042] (in reverse order)
[2025-06-05 02:09:33] 2025-06-05 00:09:20,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:09:33] 2025-06-05 00:09:20,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:09:33] 2025-06-05 00:09:20,700 | INFO     | did not find any defunct processes belonging to 1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:20,700 | INFO     | did not find any defunct processes belonging to 1454042
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | ready for new job
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | **************************************
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | **************************************
[2025-06-05 02:09:33] 2025-06-05 00:09:20,701 | INFO     | 
[2025-06-05 02:09:33] 2025-06-05 00:09:20,702 | INFO     | architecture information:
[2025-06-05 02:09:33] 2025-06-05 00:09:20,702 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:09:33] 2025-06-05 00:09:20,711 | INFO     | cat /etc/os-release:
[2025-06-05 02:09:33] NAME="CentOS Linux"
[2025-06-05 02:09:33] VERSION="7 (Core)"
[2025-06-05 02:09:33] ID="centos"
[2025-06-05 02:09:33] ID_LIKE="rhel fedora"
[2025-06-05 02:09:33] VERSION_ID="7"
[2025-06-05 02:09:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:09:33] ANSI_COLOR="0;31"
[2025-06-05 02:09:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:09:33] HOME_URL="https://www.centos.org/"
[2025-06-05 02:09:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:09:33] 
[2025-06-05 02:09:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:09:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:09:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:09:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:09:33] 
[2025-06-05 02:09:33] 2025-06-05 00:09:20,711 | INFO     | **************************************
[2025-06-05 02:09:33] 2025-06-05 00:09:21,215 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 02:09:33] 2025-06-05 00:09:21,227 | INFO     | sufficient remaining disk space (369888329728 B)
[2025-06-05 02:09:33] 2025-06-05 00:09:21,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | INFO     | update_server=False
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:09:33] 2025-06-05 00:09:21,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:09:33] 2025-06-05 00:09:21,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:09:33] 2025-06-05 00:09:21,347 | INFO     | aborting loop
[2025-06-05 02:09:33] 2025-06-05 00:09:22,085 | INFO     | all data control threads have been joined
[2025-06-05 02:09:33] 2025-06-05 00:09:22,233 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:22,234 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:22,325 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:22,350 | INFO     | all payload control threads have been joined
[2025-06-05 02:09:33] 2025-06-05 00:09:22,353 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:22,459 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:22,806 | INFO     | all job control threads have been joined
[2025-06-05 02:09:33] 2025-06-05 00:09:22,839 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,001 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,091 | INFO     | [data] control thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,234 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,289 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,356 | INFO     | [job] validate thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,356 | INFO     | [payload] control thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,394 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,473 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,811 | INFO     | [job] control thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:23,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:09:33] 2025-06-05 00:09:27,932 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:09:33] 2025-06-05 00:09:28,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888577156928)>', '<ExcThread(monitor, started 139887932065536)>']
[2025-06-05 02:09:33] 2025-06-05 00:09:29,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:09:33] 2025-06-05 00:09:29,271 | INFO     | [monitor] control thread has ended
[2025-06-05 02:09:33] 2025-06-05 00:09:33,537 | INFO     | all workflow threads have been joined
[2025-06-05 02:09:33] 2025-06-05 00:09:33,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:09:33] 2025-06-05 00:09:33,537 | INFO     | traces error code: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:33,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:09:33] 2025-06-05 00:09:33,589 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:09:33] 2025-06-05 00:09:33,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:09:33] 2025-06-05 00:09:33,594 [wrapper] pilotpid: 1447548
[2025-06-05 02:09:33] 2025-06-05 00:09:33,597 [wrapper] Pilot exit status: 0
[2025-06-05 02:09:33] 2025-06-05 00:09:33,604 [wrapper] pandaids: 6678215898
[2025-06-05 02:09:33] 2025-06-05 00:09:33,621 [wrapper] cleanup supervisor_pilot 1463557 1447549
[2025-06-05 02:09:33] 2025-06-05 00:09:33,624 [wrapper] Test setup, not cleaning
[2025-06-05 02:09:33] 2025-06-05 00:09:33,626 [wrapper] apfmon messages muted
[2025-06-05 02:09:33] 2025-06-05 00:09:33,629 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:09:33] 2025-06-05 00:09:33,631 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:09:33]  *** Error codes and diagnostics ***
[2025-06-05 02:09:33]     "exeErrorCode": 0,
[2025-06-05 02:09:33]     "exeErrorDiag": "",
[2025-06-05 02:09:33]     "pilotErrorCode": 0,
[2025-06-05 02:09:33]     "pilotErrorDiag": "",
[2025-06-05 02:09:33]  *** Listing of results directory ***
[2025-06-05 02:09:33] total 386256
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 02:09:33] -rwx------ 1 boinc boinc     37140 Jun  4 02:41 runpilot2-wrapper.sh
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:41 queuedata.json
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:09:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:55 run_atlas
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:55 job.xml
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc 213340469 Jun  5 00:55 EVNT.45006593._001970.pool.root.1
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc      6929 Jun  5 00:55 init_data.xml
[2025-06-05 02:09:33] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:55 shared
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:55 input.tar.gz
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:55 start_atlas.sh
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:55 boinc_lockfile
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc      2524 Jun  5 00:55 pandaJob.out
[2025-06-05 02:09:33] -rw------- 1 boinc boinc    987032 Jun  5 00:55 agis_schedconf.cvmfs.json
[2025-06-05 02:09:33] -rw------- 1 boinc boinc   1598969 Jun  5 00:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:09:33] drwx------ 4 boinc boinc      4096 Jun  5 00:55 pilot3
[2025-06-05 02:09:33] -rw------- 1 boinc boinc        95 Jun  5 02:08 pilot_heartbeat.json
[2025-06-05 02:09:33] -rw------- 1 boinc boinc 177018732 Jun  5 02:08 HITS.45006595._049120.pool.root.1
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc       529 Jun  5 02:08 boinc_task_state.xml
[2025-06-05 02:09:33] -rw------- 1 boinc boinc      1017 Jun  5 02:09 memory_monitor_summary.json
[2025-06-05 02:09:33] -rw------- 1 boinc boinc    228959 Jun  5 02:09 log.45006595._049120.job.log.tgz.1
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:09 boinc_mmap_file
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc        27 Jun  5 02:09 wrapper_checkpoint.txt
[2025-06-05 02:09:33] -rw------- 1 boinc boinc      7646 Jun  5 02:09 heartbeat.json
[2025-06-05 02:09:33] -rw------- 1 boinc boinc      4480 Jun  5 02:09 pilotlog.txt
[2025-06-05 02:09:33] -rw------- 1 boinc boinc    437520 Jun  5 02:09 log.45006595._049120.job.log.1
[2025-06-05 02:09:33] -rw------- 1 boinc boinc       357 Jun  5 02:09 output.list
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:09 runtime_log
[2025-06-05 02:09:33] -rw------- 1 boinc boinc    686080 Jun  5 02:09 result.tar.gz
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc      8733 Jun  5 02:09 runtime_log.err
[2025-06-05 02:09:33] -rw------- 1 boinc boinc       658 Jun  5 02:09 Up1MDmUNrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2NaKDm3woXAo.diag
[2025-06-05 02:09:33] -rw-r--r-- 1 boinc boinc     21463 Jun  5 02:09 stderr.txt
[2025-06-05 02:09:33] HITS file was successfully produced:
[2025-06-05 02:09:33] -rw------- 1 boinc boinc 177018732 Jun  5 02:08 shared/HITS.pool.root.1
[2025-06-05 02:09:33]  *** Contents of shared directory: ***
[2025-06-05 02:09:33] total 382412
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc 213340469 Jun  5 00:55 ATLAS.root_0
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:55 input.tar.gz
[2025-06-05 02:09:33] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:55 start_atlas.sh
[2025-06-05 02:09:33] -rw------- 1 boinc boinc 177018732 Jun  5 02:08 HITS.pool.root.1
[2025-06-05 02:09:33] -rw------- 1 boinc boinc    686080 Jun  5 02:09 result.tar.gz
02:09:35 (1443912): run_atlas exited; CPU time 12657.019763
02:09:35 (1443912): called boinc_finish(0)

</stderr_txt>
]]>

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