Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:23 (497113): wrapper (7.7.26015): starting
09:55:23 (497113): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:55:23] Arguments: --nthreads 8
[2025-06-04 09:55:23] Threads: 8
[2025-06-04 09:55:23] Checking for CVMFS
[2025-06-04 09:55:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:55:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:55:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:55:24] 2.12.6.0 383503 23596 590812 146781 1 197 21471427 32935937 6224 16776704 0 226196782 99.691 180704144 22405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:55:24] CVMFS is ok
[2025-06-04 09:55:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:55:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:55:24] Further information can be found at the LHC@home message board.
[2025-06-04 09:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:55:24] Checking for apptainer binary...
[2025-06-04 09:55:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:55:24] Running /usr/bin/apptainer --version
[2025-06-04 09:55:24] apptainer version 1.4.1-1.el9
[2025-06-04 09:55:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:55:24] c7-2-14.aglt2.org
[2025-06-04 09:55:24] apptainer works
[2025-06-04 09:55:24] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:55:24] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:55:24] Starting ATLAS job with PandaID=6678314014
[2025-06-04 09:55:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:36:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:36:56]  guid=5b6d24db-d983-4d30-8354-1a5ef740a75d
[2025-06-04 10:36:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:36:56]  is_altstaged=None
[2025-06-04 10:36:56]  is_tar=False
[2025-06-04 10:36:56]  lfn=log.45006595._052899.job.log.tgz.1
[2025-06-04 10:36:56]  mtime=0
[2025-06-04 10:36:56]  protocol_id=None
[2025-06-04 10:36:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:36:56]  replicas=None
[2025-06-04 10:36:56]  scope=mc23_13p6TeV
[2025-06-04 10:36:56]  status=None
[2025-06-04 10:36:56]  status_code=0
[2025-06-04 10:36:56]  storage_token=
[2025-06-04 10:36:56]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678314014/log.45006595._052899.job.log.tgz.1
[2025-06-04 10:36:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/a3/log.45006595._052899.job.log.tgz.1
[2025-06-04 10:36:56]  workdir=None
[2025-06-04 10:36:56] ]
[2025-06-04 10:36:56] 2025-06-04 14:36:39,888 | INFO     | transferring file log.45006595._052899.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678314014/log.45006595._052899.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:36:56] 2025-06-04 14:36:39,889 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678314014/log.45006595._052899.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._052899.job
[2025-06-04 10:36:56] 2025-06-04 14:36:39,902 | INFO     | adding to output.list: log.45006595._052899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/a3/log.45006595._052899.job.log.tg
[2025-06-04 10:36:56] 2025-06-04 14:36:39,903 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:36:56] 2025-06-04 14:36:39,903 | INFO     | summary of transferred files:
[2025-06-04 10:36:56] 2025-06-04 14:36:39,903 | INFO     |  -- lfn=log.45006595._052899.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:36:56] 2025-06-04 14:36:39,903 | INFO     | stage-out finished correctly
[2025-06-04 10:36:56] 2025-06-04 14:36:40,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:36:56] 2025-06-04 14:36:40,498 | INFO     | job 6678314014 has state=finished
[2025-06-04 10:36:56] 2025-06-04 14:36:40,498 | INFO     | preparing for final server update for job 6678314014 in state='finished'
[2025-06-04 10:36:56] 2025-06-04 14:36:40,499 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:36:56] 2025-06-04 14:36:40,499 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:36:56] 2025-06-04 14:36:40,499 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:36:56] 2025-06-04 14:36:40,499 | INFO     | job 6678314014 has finished - writing final server update
[2025-06-04 10:36:56] 2025-06-04 14:36:40,499 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:36:56] 2025-06-04 14:36:40,500 | INFO     | executing command: lscpu
[2025-06-04 10:36:56] 2025-06-04 14:36:40,540 | INFO     | monitor loop #188: job 0:6678314014 is in state 'finished'
[2025-06-04 10:36:56] 2025-06-04 14:36:40,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:36:56] 2025-06-04 14:36:40,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:36:56] 2025-06-04 14:36:43,044 | INFO     | monitor loop #189: job 0:6678314014 is in state 'finished'
[2025-06-04 10:36:56] 2025-06-04 14:36:43,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,050 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:36:56] 2025-06-04 14:36:43,066 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2931.937239583331
[2025-06-04 10:36:56] 2025-06-04 14:36:43,086 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678314014/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,087 | INFO     | extracted standard info from prmon json
[2025-06-04 10:36:56] 2025-06-04 14:36:43,087 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:36:56] 2025-06-04 14:36:43,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:36:56] 2025-06-04 14:36:43,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:36:56] 2025-06-04 14:36:43,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:36:56] 2025-06-04 14:36:43,088 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:36:56] 2025-06-04 14:36:43,088 | INFO     | sum of square deviations: 12176972.5
[2025-06-04 10:36:56] 2025-06-04 14:36:43,088 | INFO     | sum of deviations: 3399535490.0
[2025-06-04 10:36:56] 2025-06-04 14:36:43,088 | INFO     | mean x: 1749046663.5
[2025-06-04 10:36:56] 2025-06-04 14:36:43,088 | INFO     | mean y: 2243404.529411765
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | -- intersect: -488292051933.1941
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | intersect: -488292051933.1941
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | chi2: 0.6907997933135829
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | -- intersect: -488292051933.1941
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | current memory leak: 279.18 B/s (using 34 data points, chi2=0.69)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | could have reported an average CPU frequency of 2969 MHz (5 samples)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | ..............................
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . Timing measurements:
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . get job = 0 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . initial setup = 2 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . payload setup = 4 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . stage-in = 0 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . payload execution = 2445 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . stage-out = 0 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | . log creation = 0 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,089 | INFO     | ..............................
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | 
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | job summary report
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | --------------------------------------------------
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | PanDA job id: 6678314014
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | task id: 45006595
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | errors: (none)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | pilot state: finished 
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | transexitcode: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | exeerrorcode: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | exeerrordiag: 
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | exitcode: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | exitmsg: OK
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | cpuconsumptiontime: 15242 s
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | nevents: 400
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | neventsw: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | pid: 507227
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | pgrp: 507227
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | corecount: 8
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | event service: False
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | sizes: {0: 2397569, 3: 2397945, 11: 2397973, 2452: 2423151, 2453: 2423150, 2455: 2432331, 2458: 2432501}
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | --------------------------------------------------
[2025-06-04 10:36:56] 2025-06-04 14:36:43,129 | INFO     | 
[2025-06-04 10:36:56] 2025-06-04 14:36:43,130 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:36:56] 2025-06-04 14:36:43,146 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:36:56] 2025-06-04 14:36:43,147 | INFO     | job 6678314014 has completed (purged errors)
[2025-06-04 10:36:56] 2025-06-04 14:36:43,148 | INFO     | overall cleanup function is called
[2025-06-04 10:36:56] 2025-06-04 14:36:44,155 | INFO     | --- collectZombieJob: --- 10, [507227]
[2025-06-04 10:36:56] 2025-06-04 14:36:44,155 | INFO     | zombie collector waiting for pid 507227
[2025-06-04 10:36:56] 2025-06-04 14:36:44,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:36:56] 2025-06-04 14:36:44,155 | INFO     | collected zombie processes
[2025-06-04 10:36:56] 2025-06-04 14:36:44,155 | INFO     | will attempt to kill all subprocesses of pid=507227
[2025-06-04 10:36:56] 2025-06-04 14:36:44,381 | INFO     | process IDs to be killed: [507227] (in reverse order)
[2025-06-04 10:36:56] 2025-06-04 14:36:44,461 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:36:56] 2025-06-04 14:36:44,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:36:56] 2025-06-04 14:36:44,471 | INFO     | did not find any defunct processes belonging to 507227
[2025-06-04 10:36:56] 2025-06-04 14:36:44,477 | INFO     | did not find any defunct processes belonging to 507227
[2025-06-04 10:36:56] 2025-06-04 14:36:44,477 | INFO     | ready for new job
[2025-06-04 10:36:56] 2025-06-04 14:36:44,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:36:56] 2025-06-04 14:36:44,478 | INFO     | ***************************************
[2025-06-04 10:36:56] 2025-06-04 14:36:44,478 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 10:36:56] 2025-06-04 14:36:44,478 | INFO     | ***************************************
[2025-06-04 10:36:56] 2025-06-04 14:36:44,478 | INFO     | 
[2025-06-04 10:36:56] 2025-06-04 14:36:44,493 | INFO     | architecture information:
[2025-06-04 10:36:56] 2025-06-04 14:36:44,493 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:36:56] 2025-06-04 14:36:44,503 | INFO     | cat /etc/os-release:
[2025-06-04 10:36:56] NAME="CentOS Linux"
[2025-06-04 10:36:56] VERSION="7 (Core)"
[2025-06-04 10:36:56] ID="centos"
[2025-06-04 10:36:56] ID_LIKE="rhel fedora"
[2025-06-04 10:36:56] VERSION_ID="7"
[2025-06-04 10:36:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:36:56] ANSI_COLOR="0;31"
[2025-06-04 10:36:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:36:56] HOME_URL="https://www.centos.org/"
[2025-06-04 10:36:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:36:56] 
[2025-06-04 10:36:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:36:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:36:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:36:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:36:56] 
[2025-06-04 10:36:56] 2025-06-04 14:36:44,504 | INFO     | ***************************************
[2025-06-04 10:36:56] 2025-06-04 14:36:45,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:36:56] 2025-06-04 14:36:45,019 | INFO     | sufficient remaining disk space (75603378176 B)
[2025-06-04 10:36:56] 2025-06-04 14:36:45,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:36:56] 2025-06-04 14:36:45,019 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | INFO     | update_server=False
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:36:56] 2025-06-04 14:36:45,020 | INFO     | aborting loop
[2025-06-04 10:36:56] 2025-06-04 14:36:45,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:36:56] 2025-06-04 14:36:45,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:36:56] 2025-06-04 14:36:45,146 | INFO     | all job control threads have been joined
[2025-06-04 10:36:56] 2025-06-04 14:36:45,371 | INFO     | all data control threads have been joined
[2025-06-04 10:36:56] 2025-06-04 14:36:45,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:36:56] 2025-06-04 14:36:45,465 | INFO     | all payload control threads have been joined
[2025-06-04 10:36:56] 2025-06-04 14:36:46,025 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,026 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,026 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,152 | INFO     | [job] control thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,377 | INFO     | [data] control thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,471 | INFO     | [payload] control thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,478 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:36:56] 2025-06-04 14:36:46,609 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,682 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,764 | INFO     | [job] validate thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:46,883 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:47,022 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:47,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:47,461 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:47,512 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:50,510 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:36:56] 2025-06-04 14:36:51,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877438543680)>', '<ExcThread(monitor, started 139876800386816)>']
[2025-06-04 10:36:56] 2025-06-04 14:36:52,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:36:56] 2025-06-04 14:36:52,048 | INFO     | [monitor] control thread has ended
[2025-06-04 10:36:56] 2025-06-04 14:36:56,242 | INFO     | all workflow threads have been joined
[2025-06-04 10:36:56] 2025-06-04 14:36:56,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:36:56] 2025-06-04 14:36:56,243 | INFO     | traces error code: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:56,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:36:56] 2025-06-04 14:36:56,405 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:36:56] 2025-06-04 14:36:56,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:36:56] 2025-06-04 14:36:56,409 [wrapper] pilotpid: 500739
[2025-06-04 10:36:56] 2025-06-04 14:36:56,410 [wrapper] Pilot exit status: 0
[2025-06-04 10:36:56] 2025-06-04 14:36:56,416 [wrapper] pandaids: 6678314014
[2025-06-04 10:36:56] 2025-06-04 14:36:56,476 [wrapper] cleanup supervisor_pilot  606926 500740
[2025-06-04 10:36:56] 2025-06-04 14:36:56,477 [wrapper] Test setup, not cleaning
[2025-06-04 10:36:56] 2025-06-04 14:36:56,479 [wrapper] apfmon messages muted
[2025-06-04 10:36:56] 2025-06-04 14:36:56,481 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:36:56] 2025-06-04 14:36:56,483 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:36:56]  *** Error codes and diagnostics ***
[2025-06-04 10:36:56]     "exeErrorCode": 0,
[2025-06-04 10:36:56]     "exeErrorDiag": "",
[2025-06-04 10:36:56]     "pilotErrorCode": 0,
[2025-06-04 10:36:56]     "pilotErrorDiag": "",
[2025-06-04 10:36:56]  *** Listing of results directory ***
[2025-06-04 10:36:56] total 386548
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas    549845 Jun  2 05:40 pilot3.tar.gz
[2025-06-04 10:36:56] -rwx------. 1 boincer umatlas     37140 Jun  4 01:06 runpilot2-wrapper.sh
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:06 queuedata.json
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:36:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:55 run_atlas
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:55 job.xml
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas 214506365 Jun  4 09:55 EVNT.45006593._002118.pool.root.1
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:55 start_atlas.sh
[2025-06-04 10:36:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:55 shared
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas    564112 Jun  4 09:55 input.tar.gz
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:55 boinc_lockfile
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:55 pandaJob.out
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas    986819 Jun  4 09:55 agis_schedconf.cvmfs.json
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:36:56] drwx------. 6 boincer umatlas      4096 Jun  4 09:55 pilot3
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 10:28 init_data.xml
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas        95 Jun  4 10:36 pilot_heartbeat.json
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas 176243455 Jun  4 10:36 HITS.45006595._052899.pool.root.1
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:36 boinc_task_state.xml
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas      1023 Jun  4 10:36 memory_monitor_summary.json
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas    294163 Jun  4 10:36 log.45006595._052899.job.log.tgz.1
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas      7692 Jun  4 10:36 heartbeat.json
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:36 wrapper_checkpoint.txt
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:36 boinc_mmap_file
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas      4480 Jun  4 10:36 pilotlog.txt
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas    274567 Jun  4 10:36 log.45006595._052899.job.log.1
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas       357 Jun  4 10:36 output.list
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:36 runtime_log
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas    583680 Jun  4 10:36 result.tar.gz
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:36 runtime_log.err
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas       648 Jun  4 10:36 J2ENDmzVvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqjaKDm36uhEn.diag
[2025-06-04 10:36:56] -rw-r--r--. 1 boincer umatlas     21331 Jun  4 10:36 stderr.txt
[2025-06-04 10:36:56] HITS file was successfully produced:
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas 176243455 Jun  4 10:36 shared/HITS.pool.root.1
[2025-06-04 10:36:56]  *** Contents of shared directory: ***
[2025-06-04 10:36:56] total 382744
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas 214506365 Jun  4 09:55 ATLAS.root_0
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:55 start_atlas.sh
[2025-06-04 10:36:56] -rw-r--r--. 2 boincer umatlas    564112 Jun  4 09:55 input.tar.gz
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas 176243455 Jun  4 10:36 HITS.pool.root.1
[2025-06-04 10:36:56] -rw-------. 1 boincer umatlas    583680 Jun  4 10:36 result.tar.gz
10:36:58 (497113): run_atlas exited; CPU time 15275.088463
10:36:58 (497113): called boinc_finish(0)

</stderr_txt>
]]>

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