Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:35:36 (3290867): wrapper (7.7.26015): starting
10:35:36 (3290867): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 10:35:36] Arguments: --nthreads 12
[2025-06-04 10:35:36] Threads: 12
[2025-06-04 10:35:36] Checking for CVMFS
[2025-06-04 10:35:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:35:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:35:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:35:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:35:37] 2.12.6.0 5825 1466 151848 146781 0 202 35888928 40960000 4965 16776704 0 11020157 99.916 1917910 50394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:35:37] CVMFS is ok
[2025-06-04 10:35:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:35:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:35:37] Further information can be found at the LHC@home message board.
[2025-06-04 10:35:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:35:37] Checking for apptainer binary...
[2025-06-04 10:35:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:35:37] Running /usr/bin/apptainer --version
[2025-06-04 10:35:37] apptainer version 1.4.1-1.el9
[2025-06-04 10:35:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:35:37] c6-8-12-4.aglt2.org
[2025-06-04 10:35:37] apptainer works
[2025-06-04 10:35:37] Set ATHENA_PROC_NUMBER=12
[2025-06-04 10:35:37] Set ATHENA_CORE_NUMBER=12
[2025-06-04 10:35:37] Starting ATLAS job with PandaID=6677785216
[2025-06-04 10:35:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:16:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:16:52]  is_altstaged=None
[2025-06-04 11:16:52]  is_tar=False
[2025-06-04 11:16:52]  lfn=log.45006595._039567.job.log.tgz.1
[2025-06-04 11:16:52]  mtime=0
[2025-06-04 11:16:52]  protocol_id=None
[2025-06-04 11:16:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:16:52]  replicas=None
[2025-06-04 11:16:52]  scope=mc23_13p6TeV
[2025-06-04 11:16:52]  status=None
[2025-06-04 11:16:52]  status_code=0
[2025-06-04 11:16:52]  storage_token=
[2025-06-04 11:16:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677785216/log.45006595._039567.job.log.tgz.1
[2025-06-04 11:16:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/31/log.45006595._039567.job.log.tgz.1
[2025-06-04 11:16:52]  workdir=None
[2025-06-04 11:16:52] ]
[2025-06-04 11:16:52] 2025-06-04 15:16:33,326 | INFO     | transferring file log.45006595._039567.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677785216/log.45006595._039567.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:16:52] 2025-06-04 15:16:33,326 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677785216/log.45006595._039567.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._039567.job
[2025-06-04 11:16:52] 2025-06-04 15:16:33,339 | INFO     | adding to output.list: log.45006595._039567.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/31/log.45006595._039567.job.log.tg
[2025-06-04 11:16:52] 2025-06-04 15:16:33,339 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:16:52] 2025-06-04 15:16:33,339 | INFO     | summary of transferred files:
[2025-06-04 11:16:52] 2025-06-04 15:16:33,339 | INFO     |  -- lfn=log.45006595._039567.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:16:52] 2025-06-04 15:16:33,340 | INFO     | stage-out finished correctly
[2025-06-04 11:16:52] 2025-06-04 15:16:34,432 | INFO     | monitor loop #187: job 0:6677785216 is in state 'finished'
[2025-06-04 11:16:52] 2025-06-04 15:16:34,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:16:52] 2025-06-04 15:16:35,991 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:16:52] 2025-06-04 15:16:36,935 | INFO     | monitor loop #188: job 0:6677785216 is in state 'finished'
[2025-06-04 11:16:52] 2025-06-04 15:16:36,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:16:52] 2025-06-04 15:16:37,788 | INFO     | job 6677785216 has state=finished
[2025-06-04 11:16:52] 2025-06-04 15:16:37,788 | INFO     | preparing for final server update for job 6677785216 in state='finished'
[2025-06-04 11:16:52] 2025-06-04 15:16:37,789 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:16:52] 2025-06-04 15:16:37,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:16:52] 2025-06-04 15:16:37,789 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:16:52] 2025-06-04 15:16:37,789 | INFO     | job 6677785216 has finished - writing final server update
[2025-06-04 11:16:52] 2025-06-04 15:16:37,789 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:16:52] 2025-06-04 15:16:37,803 | INFO     | executing command: lscpu
[2025-06-04 11:16:52] 2025-06-04 15:16:37,861 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:16:52] 2025-06-04 15:16:39,438 | INFO     | monitor loop #189: job 0:6677785216 is in state 'finished'
[2025-06-04 11:16:52] 2025-06-04 15:16:39,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:16:52] 2025-06-04 15:16:39,968 | INFO     | PID=3294517 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 11:16:52] 2025-06-04 15:16:39,968 | INFO     | .. there are 8 such processes running
[2025-06-04 11:16:52] 2025-06-04 15:16:40,461 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:16:52] 2025-06-04 15:16:40,461 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677785216/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:16:52] 2025-06-04 15:16:40,462 | INFO     | extracted standard info from prmon json
[2025-06-04 11:16:52] 2025-06-04 15:16:40,462 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:16:52] 2025-06-04 15:16:40,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:16:52] 2025-06-04 15:16:40,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:16:52] 2025-06-04 15:16:40,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | sum of square deviations: 11133232.0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | sum of deviations: 4921324084.000001
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | mean x: 1749049046.0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | mean y: 2659769.909090909
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | -- intersect: -773145442611.9532
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | intersect: -773145442611.9532
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | chi2: 0.5950365211101013
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | -- intersect: -773145442611.9532
[2025-06-04 11:16:52] 2025-06-04 15:16:40,463 | INFO     | current memory leak: 442.04 B/s (using 33 data points, chi2=0.60)
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | ..............................
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . Timing measurements:
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . get job = 0 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . initial setup = 2 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . payload setup = 4 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . stage-in = 0 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . payload execution = 2426 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . stage-out = 0 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | . log creation = 0 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,464 | INFO     | ..............................
[2025-06-04 11:16:52] 2025-06-04 15:16:40,509 | INFO     | 
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | job summary report
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | --------------------------------------------------
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | PanDA job id: 6677785216
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | task id: 45006595
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | errors: (none)
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | pilot state: finished 
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | transexitcode: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | exeerrorcode: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | exeerrordiag: 
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | exitcode: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | exitmsg: OK
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | cpuconsumptiontime: 21408 s
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | nevents: 400
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | neventsw: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | pid: 3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | pgrp: 3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | corecount: 12
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | event service: False
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | sizes: {0: 2397115, 1: 2397370, 3: 2397576, 11: 2397604, 2434: 2422696, 2435: 2431637, 2438: 2431821, 2442: 2431991}
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | --------------------------------------------------
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | 
[2025-06-04 11:16:52] 2025-06-04 15:16:40,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:16:52] 2025-06-04 15:16:40,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | job 6677785216 has completed (purged errors)
[2025-06-04 11:16:52] 2025-06-04 15:16:40,523 | INFO     | overall cleanup function is called
[2025-06-04 11:16:52] 2025-06-04 15:16:41,530 | INFO     | --- collectZombieJob: --- 10, [3301571]
[2025-06-04 11:16:52] 2025-06-04 15:16:41,530 | INFO     | zombie collector waiting for pid 3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:41,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:16:52] 2025-06-04 15:16:41,531 | INFO     | collected zombie processes
[2025-06-04 11:16:52] 2025-06-04 15:16:41,531 | INFO     | will attempt to kill all subprocesses of pid=3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:41,656 | INFO     | process IDs to be killed: [3301571] (in reverse order)
[2025-06-04 11:16:52] 2025-06-04 15:16:41,704 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:16:52] 2025-06-04 15:16:41,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:16:52] 2025-06-04 15:16:41,710 | INFO     | did not find any defunct processes belonging to 3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:41,715 | INFO     | did not find any defunct processes belonging to 3301571
[2025-06-04 11:16:52] 2025-06-04 15:16:41,715 | INFO     | ready for new job
[2025-06-04 11:16:52] 2025-06-04 15:16:41,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:16:52] 2025-06-04 15:16:41,716 | INFO     | **************************************
[2025-06-04 11:16:52] 2025-06-04 15:16:41,716 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:16:52] 2025-06-04 15:16:41,716 | INFO     | **************************************
[2025-06-04 11:16:52] 2025-06-04 15:16:41,716 | INFO     | 
[2025-06-04 11:16:52] 2025-06-04 15:16:41,730 | INFO     | architecture information:
[2025-06-04 11:16:52] 2025-06-04 15:16:41,731 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:16:52] 2025-06-04 15:16:41,741 | INFO     | cat /etc/os-release:
[2025-06-04 11:16:52] NAME="CentOS Linux"
[2025-06-04 11:16:52] VERSION="7 (Core)"
[2025-06-04 11:16:52] ID="centos"
[2025-06-04 11:16:52] ID_LIKE="rhel fedora"
[2025-06-04 11:16:52] VERSION_ID="7"
[2025-06-04 11:16:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:16:52] ANSI_COLOR="0;31"
[2025-06-04 11:16:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:16:52] HOME_URL="https://www.centos.org/"
[2025-06-04 11:16:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:16:52] 
[2025-06-04 11:16:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:16:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:16:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:16:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:16:52] 
[2025-06-04 11:16:52] 2025-06-04 15:16:41,741 | INFO     | **************************************
[2025-06-04 11:16:52] 2025-06-04 15:16:42,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:16:52] 2025-06-04 15:16:42,255 | INFO     | sufficient remaining disk space (56317968384 B)
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | INFO     | update_server=False
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:16:52] 2025-06-04 15:16:42,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:16:52] 2025-06-04 15:16:42,257 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:16:52] 2025-06-04 15:16:42,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:16:52] 2025-06-04 15:16:42,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:16:52] 2025-06-04 15:16:42,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:16:52] 2025-06-04 15:16:42,946 | INFO     | aborting loop
[2025-06-04 11:16:52] 2025-06-04 15:16:43,014 | INFO     | all payload control threads have been joined
[2025-06-04 11:16:52] 2025-06-04 15:16:43,101 | INFO     | all data control threads have been joined
[2025-06-04 11:16:52] 2025-06-04 15:16:43,104 | INFO     | all job control threads have been joined
[2025-06-04 11:16:52] 2025-06-04 15:16:43,261 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,262 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,344 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,550 | INFO     | [job] validate thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,562 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,861 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,904 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,952 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:43,986 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:44,020 | INFO     | [payload] control thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:44,107 | INFO     | [data] control thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:44,109 | INFO     | [job] control thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:44,262 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:44,636 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:46,263 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:16:52] 2025-06-04 15:16:47,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998415095616)>', '<ExcThread(monitor, started 139997906708224)>']
[2025-06-04 11:16:52] 2025-06-04 15:16:48,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:16:52] 2025-06-04 15:16:48,288 | INFO     | [monitor] control thread has ended
[2025-06-04 11:16:52] 2025-06-04 15:16:52,554 | INFO     | all workflow threads have been joined
[2025-06-04 11:16:52] 2025-06-04 15:16:52,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:16:52] 2025-06-04 15:16:52,554 | INFO     | traces error code: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:52,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:16:52] 2025-06-04 15:16:52,649 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:16:52] 2025-06-04 15:16:52,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:16:52] 2025-06-04 15:16:52,653 [wrapper] pilotpid: 3294517
[2025-06-04 11:16:52] 2025-06-04 15:16:52,655 [wrapper] Pilot exit status: 0
[2025-06-04 11:16:52] 2025-06-04 15:16:52,662 [wrapper] pandaids: 6677785216
[2025-06-04 11:16:52] 2025-06-04 15:16:52,695 [wrapper] cleanup supervisor_pilot 3351152 3294518
[2025-06-04 11:16:52] 2025-06-04 15:16:52,697 [wrapper] Test setup, not cleaning
[2025-06-04 11:16:52] 2025-06-04 15:16:52,699 [wrapper] apfmon messages muted
[2025-06-04 11:16:52] 2025-06-04 15:16:52,701 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:16:52] 2025-06-04 15:16:52,703 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:16:52]  *** Error codes and diagnostics ***
[2025-06-04 11:16:52]     "exeErrorCode": 0,
[2025-06-04 11:16:52]     "exeErrorDiag": "",
[2025-06-04 11:16:52]     "pilotErrorCode": 0,
[2025-06-04 11:16:52]     "pilotErrorDiag": "",
[2025-06-04 11:16:52]  *** Listing of results directory ***
[2025-06-04 11:16:52] total 385928
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:53 queuedata.json
[2025-06-04 11:16:52] -rwx------. 1 boincer umatlas     37140 Jun  3 12:54 runpilot2-wrapper.sh
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:16:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:35 run_atlas
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:35 job.xml
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas 215150311 Jun  4 10:35 EVNT.45006593._001587.pool.root.1
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:35 start_atlas.sh
[2025-06-04 11:16:52] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:35 shared
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:35 input.tar.gz
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:35 boinc_lockfile
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 10:35 pandaJob.out
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas    986819 Jun  4 10:35 agis_schedconf.cvmfs.json
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:16:52] drwx------. 4 boincer umatlas      4096 Jun  4 10:35 pilot3
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 11:12 init_data.xml
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas 175001783 Jun  4 11:16 HITS.45006595._039567.pool.root.1
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:16 boinc_task_state.xml
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas        95 Jun  4 11:16 pilot_heartbeat.json
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas      1023 Jun  4 11:16 memory_monitor_summary.json
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:16 boinc_mmap_file
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:16 wrapper_checkpoint.txt
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas    336314 Jun  4 11:16 log.45006595._039567.job.log.tgz.1
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas      7707 Jun  4 11:16 heartbeat.json
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas      4476 Jun  4 11:16 pilotlog.txt
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas    269431 Jun  4 11:16 log.45006595._039567.job.log.1
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas       357 Jun  4 11:16 output.list
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:16 runtime_log
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas    624640 Jun  4 11:16 result.tar.gz
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 11:16 runtime_log.err
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas       651 Jun  4 11:16 8nCLDmQ5jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDlKDmbxNeIo.diag
[2025-06-04 11:16:52] -rw-r--r--. 1 boincer umatlas     21528 Jun  4 11:16 stderr.txt
[2025-06-04 11:16:52] HITS file was successfully produced:
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas 175001783 Jun  4 11:16 shared/HITS.pool.root.1
[2025-06-04 11:16:52]  *** Contents of shared directory: ***
[2025-06-04 11:16:52] total 382140
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas 215150311 Jun  4 10:35 ATLAS.root_0
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:35 start_atlas.sh
[2025-06-04 11:16:52] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:35 input.tar.gz
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas 175001783 Jun  4 11:16 HITS.pool.root.1
[2025-06-04 11:16:52] -rw-------. 1 boincer umatlas    624640 Jun  4 11:16 result.tar.gz
11:16:54 (3290867): run_atlas exited; CPU time 21441.452936
11:16:54 (3290867): called boinc_finish(0)

</stderr_txt>
]]>

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