Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:16:54 (1405950): wrapper (7.7.26015): starting
01:16:54 (1405950): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 01:16:54] Arguments: --nthreads 3
[2025-06-05 01:16:54] Threads: 3
[2025-06-05 01:16:54] Checking for CVMFS
[2025-06-05 01:16:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:16:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:16:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:16:54] 2.9.2.0 321233 3212 85872 146798 1 55 32031800 36864000 0 130560 0 2939444 99.992 761459 37957 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 01:16:54] CVMFS is ok
[2025-06-05 01:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:16:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:16:54] Further information can be found at the LHC@home message board.
[2025-06-05 01:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:16:54] Checking for apptainer binary...
[2025-06-05 01:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:16:54] Running /usr/bin/apptainer --version
[2025-06-05 01:16:54] apptainer version 1.3.6-6.1
[2025-06-05 01:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:16:54] thA337a
[2025-06-05 01:16:54] apptainer works
[2025-06-05 01:16:54] Set ATHENA_PROC_NUMBER=3
[2025-06-05 01:16:54] Set ATHENA_CORE_NUMBER=3
[2025-06-05 01:16:54] Starting ATLAS job with PandaID=6667923821
[2025-06-05 01:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:01:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:01:50] 2025-06-05 01:01:26,806 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:01:50] 2025-06-05 01:01:29,014 | WARNING  | process 1416089 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 03:01:50] 2025-06-05 01:01:29,014 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667923821/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:01:50] 2025-06-05 01:01:29,064 | INFO     | number of running child processes to parent process 1416089: 1
[2025-06-05 03:01:50] 2025-06-05 01:01:29,064 | INFO     | maximum number of monitored processes: 6
[2025-06-05 03:01:50] 2025-06-05 01:01:30,423 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:01:50] 2025-06-05 01:01:30,423 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667923821/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,424 | INFO     | extracted standard info from prmon json
[2025-06-05 03:01:50] 2025-06-05 01:01:30,424 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:01:50] 2025-06-05 01:01:30,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:01:50] 2025-06-05 01:01:30,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:01:50] 2025-06-05 01:01:30,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | sum of deviations: -6699788112.000002
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | mean x: 1749082151.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | mean y: 2452627.368932039
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | -- intersect: 34590187084.50592
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | intersect: 34590187084.50592
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | chi2: 1.565249619879517
[2025-06-05 03:01:50] 2025-06-05 01:01:30,425 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | sum of deviations: -5474139816.999996
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | mean x: 1749081998.5
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | mean y: 2456608.3469387754
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | -- intersect: 32813090977.090626
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | intersect: 32813090977.090626
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | chi2: 1.5671909828391577
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | current chi2=1.5671909828391577 (change=-0.12402896860567146 %)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | right removable region: 97
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | sum of deviations: -19894128677.000004
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | mean x: 1749082303.5
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | mean y: 2494187.0204081633
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | -- intersect: 119242980866.1304
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | intersect: 119242980866.1304
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | chi2: 0.06135181269349062
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | current chi2=0.06135181269349062 (change=96.08038156251313 %)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | sum of square deviations: 249388862.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,426 | INFO     | sum of deviations: -16452132917.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | mean x: 1749082456.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | mean y: 2481794.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | -- intersect: 115389098574.4431
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | intersect: 115389098574.4431
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | chi2: 0.05997431758090231
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | current chi2=0.05997431758090231 (change=2.2452394674468312 %)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | left removable region: 20
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | sum of square deviations: 141539398.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | sum of deviations: -10335666637.999998
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | mean x: 1749082578.0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | mean y: 2468740.8701298703
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | -- intersect: 127726160546.74901
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | intersect: 127726160546.74901
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | chi2: 0.048026478718710075
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | -- intersect: 127726160546.74901
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | current memory leak: -73.02 B/s (using 77 data points, chi2=0.05)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | ..............................
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | . Timing measurements:
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | . get job = 0 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | . initial setup = 1 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | . payload setup = 3 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,427 | INFO     | . stage-in = 0 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,428 | INFO     | . payload execution = 6242 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,428 | INFO     | . stage-out = 0 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,428 | INFO     | . log creation = 0 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,428 | INFO     | ..............................
[2025-06-05 03:01:50] 2025-06-05 01:01:30,862 | INFO     | 
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | job summary report
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | --------------------------------------------------
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | PanDA job id: 6667923821
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | task id: 44871837
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | errors: (none)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | pilot state: finished 
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | transexitcode: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | exeerrorcode: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | exeerrordiag: 
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | exitcode: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | exitmsg: OK
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | cpuconsumptiontime: 18102 s
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | nevents: 400
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | neventsw: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | pid: 1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | pgrp: 1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | corecount: 3
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | event service: False
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | sizes: {0: 2397173, 1: 2397372, 3: 2397578, 11: 2397606, 6249: 2433533, 6252: 2433533, 6256: 2433831}
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | --------------------------------------------------
[2025-06-05 03:01:50] 2025-06-05 01:01:30,863 | INFO     | 
[2025-06-05 03:01:50] 2025-06-05 01:01:30,864 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:01:50] 2025-06-05 01:01:30,881 | INFO     | job 6667923821 has completed (purged errors)
[2025-06-05 03:01:50] 2025-06-05 01:01:30,881 | INFO     | overall cleanup function is called
[2025-06-05 03:01:50] 2025-06-05 01:01:31,155 | INFO     | 6271s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 03:01:50] 2025-06-05 01:01:31,887 | INFO     | --- collectZombieJob: --- 10, [1416089]
[2025-06-05 03:01:50] 2025-06-05 01:01:31,888 | INFO     | zombie collector waiting for pid 1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:31,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:01:50] 2025-06-05 01:01:31,888 | INFO     | collected zombie processes
[2025-06-05 03:01:50] 2025-06-05 01:01:31,888 | INFO     | will attempt to kill all subprocesses of pid=1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:31,929 | INFO     | process IDs to be killed: [1416089] (in reverse order)
[2025-06-05 03:01:50] 2025-06-05 01:01:31,953 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:01:50] 2025-06-05 01:01:31,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:01:50] 2025-06-05 01:01:31,954 | INFO     | did not find any defunct processes belonging to 1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:31,955 | INFO     | did not find any defunct processes belonging to 1416089
[2025-06-05 03:01:50] 2025-06-05 01:01:31,955 | INFO     | ready for new job
[2025-06-05 03:01:50] 2025-06-05 01:01:31,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | **************************************
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | **************************************
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | 
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | architecture information:
[2025-06-05 03:01:50] 2025-06-05 01:01:31,956 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:01:50] 2025-06-05 01:01:31,966 | INFO     | cat /etc/os-release:
[2025-06-05 03:01:50] NAME="CentOS Linux"
[2025-06-05 03:01:50] VERSION="7 (Core)"
[2025-06-05 03:01:50] ID="centos"
[2025-06-05 03:01:50] ID_LIKE="rhel fedora"
[2025-06-05 03:01:50] VERSION_ID="7"
[2025-06-05 03:01:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:01:50] ANSI_COLOR="0;31"
[2025-06-05 03:01:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:01:50] HOME_URL="https://www.centos.org/"
[2025-06-05 03:01:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:01:50] 
[2025-06-05 03:01:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:01:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:01:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:01:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:01:50] 
[2025-06-05 03:01:50] 2025-06-05 01:01:31,966 | INFO     | **************************************
[2025-06-05 03:01:50] 2025-06-05 01:01:32,469 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | INFO     | sufficient remaining disk space (369946001408 B)
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | INFO     | update_server=False
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:01:50] 2025-06-05 01:01:32,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:01:50] 2025-06-05 01:01:32,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:01:50] 2025-06-05 01:01:32,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:01:50] 2025-06-05 01:01:32,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:01:50] 2025-06-05 01:01:32,573 | INFO     | aborting loop
[2025-06-05 03:01:50] 2025-06-05 01:01:32,911 | INFO     | all job control threads have been joined
[2025-06-05 03:01:50] 2025-06-05 01:01:33,028 | INFO     | all payload control threads have been joined
[2025-06-05 03:01:50] 2025-06-05 01:01:33,264 | INFO     | all data control threads have been joined
[2025-06-05 03:01:50] 2025-06-05 01:01:33,489 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:33,502 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:33,512 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:33,579 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:33,762 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:33,917 | INFO     | [job] control thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,034 | INFO     | [payload] control thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,076 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,269 | INFO     | [data] control thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,489 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,555 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,637 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:34,931 | INFO     | [job] validate thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:35,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:01:50] 2025-06-05 01:01:36,477 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:36,489 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:43,025 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:01:50] 2025-06-05 01:01:44,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:01:50] 2025-06-05 01:01:45,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940573292352)>', '<ExcThread(monitor, started 139940084045568)>']
[2025-06-05 03:01:50] 2025-06-05 01:01:46,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:01:50] 2025-06-05 01:01:46,558 | INFO     | [monitor] control thread has ended
[2025-06-05 03:01:50] 2025-06-05 01:01:50,681 | INFO     | all workflow threads have been joined
[2025-06-05 03:01:50] 2025-06-05 01:01:50,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:01:50] 2025-06-05 01:01:50,682 | INFO     | traces error code: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:50,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:01:50] 2025-06-05 01:01:50,734 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:01:50] 2025-06-05 01:01:50,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:01:50] 2025-06-05 01:01:50,739 [wrapper] pilotpid: 1409591
[2025-06-05 03:01:50] 2025-06-05 01:01:50,741 [wrapper] Pilot exit status: 0
[2025-06-05 03:01:50] 2025-06-05 01:01:50,749 [wrapper] pandaids: 6667923821
[2025-06-05 03:01:50] 2025-06-05 01:01:50,766 [wrapper] cleanup supervisor_pilot 1428201 1409592
[2025-06-05 03:01:50] 2025-06-05 01:01:50,768 [wrapper] Test setup, not cleaning
[2025-06-05 03:01:50] 2025-06-05 01:01:50,771 [wrapper] apfmon messages muted
[2025-06-05 03:01:50] 2025-06-05 01:01:50,773 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:01:50] 2025-06-05 01:01:50,776 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:01:50]  *** Error codes and diagnostics ***
[2025-06-05 03:01:50]     "exeErrorCode": 0,
[2025-06-05 03:01:50]     "exeErrorDiag": "",
[2025-06-05 03:01:50]     "pilotErrorCode": 0,
[2025-06-05 03:01:50]     "pilotErrorDiag": "",
[2025-06-05 03:01:50]  *** Listing of results directory ***
[2025-06-05 03:01:50] total 420596
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc    495897 May 28 04:39 pilot3.tar.gz
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc      5111 May 28 05:10 queuedata.json
[2025-06-05 03:01:50] -rwx------ 1 boinc boinc     37140 May 28 05:11 runpilot2-wrapper.sh
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:01:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:16 run_atlas
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:16 job.xml
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc 226279075 Jun  5 01:16 EVNT.44871834._003049.pool.root.1
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc      6930 Jun  5 01:16 init_data.xml
[2025-06-05 03:01:50] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:16 shared
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc    508873 Jun  5 01:16 input.tar.gz
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:16 start_atlas.sh
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:16 boinc_lockfile
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc      2558 Jun  5 01:16 pandaJob.out
[2025-06-05 03:01:50] -rw------- 1 boinc boinc    987117 Jun  5 01:16 agis_schedconf.cvmfs.json
[2025-06-05 03:01:50] -rw------- 1 boinc boinc   1598969 Jun  5 01:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:01:50] drwx------ 4 boinc boinc      4096 Jun  5 01:17 pilot3
[2025-06-05 03:01:50] -rw------- 1 boinc boinc 198881104 Jun  5 03:01 HITS.44871837._078007.pool.root.1
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc       529 Jun  5 03:01 boinc_task_state.xml
[2025-06-05 03:01:50] -rw------- 1 boinc boinc      1014 Jun  5 03:01 memory_monitor_summary.json
[2025-06-05 03:01:50] -rw------- 1 boinc boinc    249241 Jun  5 03:01 log.44871837._078007.job.log.tgz.1
[2025-06-05 03:01:50] -rw------- 1 boinc boinc        95 Jun  5 03:01 pilot_heartbeat.json
[2025-06-05 03:01:50] -rw------- 1 boinc boinc      7651 Jun  5 03:01 heartbeat.json
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:01 boinc_mmap_file
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc        27 Jun  5 03:01 wrapper_checkpoint.txt
[2025-06-05 03:01:50] -rw------- 1 boinc boinc      4552 Jun  5 03:01 pilotlog.txt
[2025-06-05 03:01:50] -rw------- 1 boinc boinc    598223 Jun  5 03:01 log.44871837._078007.job.log.1
[2025-06-05 03:01:50] -rw------- 1 boinc boinc       357 Jun  5 03:01 output.list
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:01 runtime_log
[2025-06-05 03:01:50] -rw------- 1 boinc boinc    870400 Jun  5 03:01 result.tar.gz
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc      8738 Jun  5 03:01 runtime_log.err
[2025-06-05 03:01:50] -rw------- 1 boinc boinc       659 Jun  5 03:01 o7sLDmxNMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm18aKDm2gHuTn.diag
[2025-06-05 03:01:50] -rw-r--r-- 1 boinc boinc     21158 Jun  5 03:01 stderr.txt
[2025-06-05 03:01:50] HITS file was successfully produced:
[2025-06-05 03:01:50] -rw------- 1 boinc boinc 198881104 Jun  5 03:01 shared/HITS.pool.root.1
[2025-06-05 03:01:50]  *** Contents of shared directory: ***
[2025-06-05 03:01:50] total 416572
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc 226279075 Jun  5 01:16 ATLAS.root_0
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc    508873 Jun  5 01:16 input.tar.gz
[2025-06-05 03:01:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:16 start_atlas.sh
[2025-06-05 03:01:50] -rw------- 1 boinc boinc 198881104 Jun  5 03:01 HITS.pool.root.1
[2025-06-05 03:01:50] -rw------- 1 boinc boinc    870400 Jun  5 03:01 result.tar.gz
03:01:52 (1405950): run_atlas exited; CPU time 18119.832106
03:01:52 (1405950): called boinc_finish(0)

</stderr_txt>
]]>

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