Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:22 (23773): wrapper (7.7.26015): starting
09:56:22 (23773): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:56:22] Arguments: --nthreads 12
[2025-06-04 09:56:22] Threads: 12
[2025-06-04 09:56:22] Checking for CVMFS
[2025-06-04 09:56:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:56:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:56:22] 2.11.2.0 3087 35724 86440 146781 1 56 13037210 20275200 1 130560 0 16525989 99.987 5817563 7184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:56:22] CVMFS is ok
[2025-06-04 09:56:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:56:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:56:22] Further information can be found at the LHC@home message board.
[2025-06-04 09:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:56:22] Checking for apptainer binary...
[2025-06-04 09:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:56:22] Running /usr/bin/apptainer --version
[2025-06-04 09:56:22] apptainer version 1.3.2-1.el7
[2025-06-04 09:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:56:24] c-115-42.aglt2.org
[2025-06-04 09:56:24] apptainer works
[2025-06-04 09:56:24] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:56:24] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:56:24] Starting ATLAS job with PandaID=6666806633
[2025-06-04 09:56:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:23:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:23:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:23:14]  is_altstaged=None
[2025-06-04 11:23:14]  is_tar=False
[2025-06-04 11:23:14]  lfn=log.44871837._063492.job.log.tgz.1
[2025-06-04 11:23:14]  mtime=0
[2025-06-04 11:23:14]  protocol_id=None
[2025-06-04 11:23:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:23:14]  replicas=None
[2025-06-04 11:23:14]  scope=mc23_13p6TeV
[2025-06-04 11:23:14]  status=None
[2025-06-04 11:23:14]  status_code=0
[2025-06-04 11:23:14]  storage_token=
[2025-06-04 11:23:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666806633/log.44871837._063492.job.log.tgz.1
[2025-06-04 11:23:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/b3/log.44871837._063492.job.log.tgz.1
[2025-06-04 11:23:14]  workdir=None
[2025-06-04 11:23:14] ]
[2025-06-04 11:23:14] 2025-06-04 15:22:47,261 | INFO     | transferring file log.44871837._063492.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666806633/log.44871837._063492.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:23:14] 2025-06-04 15:22:47,261 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666806633/log.44871837._063492.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._063492.job
[2025-06-04 11:23:14] 2025-06-04 15:22:47,282 | INFO     | adding to output.list: log.44871837._063492.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/b3/log.44871837._063492.job.log.tg
[2025-06-04 11:23:14] 2025-06-04 15:22:47,283 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:23:14] 2025-06-04 15:22:47,283 | INFO     | summary of transferred files:
[2025-06-04 11:23:14] 2025-06-04 15:22:47,283 | INFO     |  -- lfn=log.44871837._063492.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:23:14] 2025-06-04 15:22:47,283 | INFO     | stage-out finished correctly
[2025-06-04 11:23:14] 2025-06-04 15:22:47,362 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:23:14] 2025-06-04 15:22:49,204 | INFO     | job 6666806633 has state=finished
[2025-06-04 11:23:14] 2025-06-04 15:22:49,204 | INFO     | preparing for final server update for job 6666806633 in state='finished'
[2025-06-04 11:23:14] 2025-06-04 15:22:49,266 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:23:14] 2025-06-04 15:22:49,267 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:23:14] 2025-06-04 15:22:49,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:23:14] 2025-06-04 15:22:49,267 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:23:14] 2025-06-04 15:22:49,267 | INFO     | job 6666806633 has finished - writing final server update
[2025-06-04 11:23:14] 2025-06-04 15:22:49,267 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:23:14] 2025-06-04 15:22:49,269 | INFO     | executing command: lscpu
[2025-06-04 11:23:14] 2025-06-04 15:22:49,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:23:14] 2025-06-04 15:22:53,569 | WARNING  | process 1606 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:23:14] 2025-06-04 15:22:53,569 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666806633/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:23:14] 2025-06-04 15:22:53,654 | INFO     | number of running child processes to parent process 1606: 1
[2025-06-04 11:23:14] 2025-06-04 15:22:53,654 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:23:14] 2025-06-04 15:22:54,083 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 11:23:14] 2025-06-04 15:22:54,083 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666806633/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:23:14] 2025-06-04 15:22:54,084 | INFO     | extracted standard info from prmon json
[2025-06-04 11:23:14] 2025-06-04 15:22:54,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:23:14] 2025-06-04 15:22:54,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:23:14] 2025-06-04 15:22:54,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:23:14] 2025-06-04 15:22:54,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:23:14] 2025-06-04 15:22:54,087 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:23:14] 2025-06-04 15:22:54,087 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 11:23:14] 2025-06-04 15:22:54,088 | INFO     | sum of deviations: -10679625264.0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,088 | INFO     | mean x: 1749048079.5
[2025-06-04 11:23:14] 2025-06-04 15:22:54,088 | INFO     | mean y: 2824789.8205128205
[2025-06-04 11:23:14] 2025-06-04 15:22:54,088 | INFO     | -- intersect: 126962826288.25154
[2025-06-04 11:23:14] 2025-06-04 15:22:54,088 | INFO     | intersect: 126962826288.25154
[2025-06-04 11:23:14] 2025-06-04 15:22:54,089 | INFO     | chi2: 0.09742325370873665
[2025-06-04 11:23:14] 2025-06-04 15:22:54,089 | INFO     | -- intersect: 126962826288.25154
[2025-06-04 11:23:14] 2025-06-04 15:22:54,089 | INFO     | current memory leak: -72.59 B/s (using 78 data points, chi2=0.10)
[2025-06-04 11:23:14] 2025-06-04 15:22:54,089 | INFO     | ..............................
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . Timing measurements:
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . get job = 0 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . initial setup = 2 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . payload setup = 9 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . stage-in = 0 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . payload execution = 5144 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . stage-out = 0 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,090 | INFO     | . log creation = 0 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,091 | INFO     | ..............................
[2025-06-04 11:23:14] 2025-06-04 15:22:54,329 | INFO     | 
[2025-06-04 11:23:14] 2025-06-04 15:22:54,329 | INFO     | job summary report
[2025-06-04 11:23:14] 2025-06-04 15:22:54,329 | INFO     | --------------------------------------------------
[2025-06-04 11:23:14] 2025-06-04 15:22:54,329 | INFO     | PanDA job id: 6666806633
[2025-06-04 11:23:14] 2025-06-04 15:22:54,329 | INFO     | task id: 44871837
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | errors: (none)
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | pilot state: finished 
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | transexitcode: 0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | exeerrorcode: 0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,330 | INFO     | exeerrordiag: 
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | exitcode: 0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | exitmsg: OK
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | cpuconsumptiontime: 56081 s
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | nevents: 400
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | neventsw: 0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | pid: 1606
[2025-06-04 11:23:14] 2025-06-04 15:22:54,331 | INFO     | pgrp: 1606
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | corecount: 12
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | event service: False
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 5153: 2423890, 5154: 2423889, 5155: 2433070, 5161: 2433184}
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | --------------------------------------------------
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | 
[2025-06-04 11:23:14] 2025-06-04 15:22:54,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:23:14] 2025-06-04 15:22:54,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:23:14] 2025-06-04 15:22:54,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:23:14] 2025-06-04 15:22:54,359 | INFO     | job 6666806633 has completed (purged errors)
[2025-06-04 11:23:14] 2025-06-04 15:22:54,359 | INFO     | overall cleanup function is called
[2025-06-04 11:23:14] 2025-06-04 15:22:55,367 | INFO     | --- collectZombieJob: --- 10, [1606]
[2025-06-04 11:23:14] 2025-06-04 15:22:55,367 | INFO     | zombie collector waiting for pid 1606
[2025-06-04 11:23:14] 2025-06-04 15:22:55,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:23:14] 2025-06-04 15:22:55,368 | INFO     | collected zombie processes
[2025-06-04 11:23:14] 2025-06-04 15:22:55,368 | INFO     | will attempt to kill all subprocesses of pid=1606
[2025-06-04 11:23:14] 2025-06-04 15:22:55,454 | INFO     | process IDs to be killed: [1606] (in reverse order)
[2025-06-04 11:23:14] 2025-06-04 15:22:55,502 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:23:14] 2025-06-04 15:22:55,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:23:14] 2025-06-04 15:22:55,506 | INFO     | did not find any defunct processes belonging to 1606
[2025-06-04 11:23:14] 2025-06-04 15:22:55,508 | INFO     | did not find any defunct processes belonging to 1606
[2025-06-04 11:23:14] 2025-06-04 15:22:55,508 | INFO     | ready for new job
[2025-06-04 11:23:14] 2025-06-04 15:22:55,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:23:14] 2025-06-04 15:22:55,509 | INFO     | **************************************
[2025-06-04 11:23:14] 2025-06-04 15:22:55,509 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:23:14] 2025-06-04 15:22:55,509 | INFO     | **************************************
[2025-06-04 11:23:14] 2025-06-04 15:22:55,509 | INFO     | 
[2025-06-04 11:23:14] 2025-06-04 15:22:55,510 | INFO     | architecture information:
[2025-06-04 11:23:14] 2025-06-04 15:22:55,510 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:23:14] 2025-06-04 15:22:55,524 | INFO     | cat /etc/os-release:
[2025-06-04 11:23:14] NAME="CentOS Linux"
[2025-06-04 11:23:14] VERSION="7 (Core)"
[2025-06-04 11:23:14] ID="centos"
[2025-06-04 11:23:14] ID_LIKE="rhel fedora"
[2025-06-04 11:23:14] VERSION_ID="7"
[2025-06-04 11:23:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:23:14] ANSI_COLOR="0;31"
[2025-06-04 11:23:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:23:14] HOME_URL="https://www.centos.org/"
[2025-06-04 11:23:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:23:14] 
[2025-06-04 11:23:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:23:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:23:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:23:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:23:14] 
[2025-06-04 11:23:14] 2025-06-04 15:22:55,524 | INFO     | **************************************
[2025-06-04 11:23:14] 2025-06-04 15:22:56,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:23:14] 2025-06-04 15:22:56,043 | INFO     | sufficient remaining disk space (18602786816 B)
[2025-06-04 11:23:14] 2025-06-04 15:22:56,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:23:14] 2025-06-04 15:22:56,043 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:23:14] 2025-06-04 15:22:56,044 | INFO     | update_server=False
[2025-06-04 11:23:14] 2025-06-04 15:22:56,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:23:14] 2025-06-04 15:22:56,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:23:14] 2025-06-04 15:22:56,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:23:14] 2025-06-04 15:22:56,157 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:23:14] 2025-06-04 15:22:56,157 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:23:14] 2025-06-04 15:22:56,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:23:14] 2025-06-04 15:22:56,157 | INFO     | will abort loop
[2025-06-04 11:23:14] 2025-06-04 15:22:56,345 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:23:14] 2025-06-04 15:22:56,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:23:14] 2025-06-04 15:22:56,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:23:14] 2025-06-04 15:22:56,378 | INFO     | all data control threads have been joined
[2025-06-04 11:23:14] 2025-06-04 15:22:56,983 | INFO     | all payload control threads have been joined
[2025-06-04 11:23:14] 2025-06-04 15:22:57,049 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,050 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,077 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,163 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,281 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,383 | INFO     | [data] control thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,397 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,565 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,660 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:57,692 | INFO     | all job control threads have been joined
[2025-06-04 11:23:14] 2025-06-04 15:22:57,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:23:14] 2025-06-04 15:22:57,989 | INFO     | [payload] control thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:58,050 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:58,438 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:58,454 | INFO     | [job] validate thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:22:58,697 | INFO     | [job] control thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:23:01,951 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:23:06,385 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:23:14] 2025-06-04 15:23:07,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:23:14] 2025-06-04 15:23:09,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566059558720)>', '<ExcThread(monitor, started 140565312153344)>']
[2025-06-04 11:23:14] 2025-06-04 15:23:09,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:23:14] 2025-06-04 15:23:09,408 | INFO     | [monitor] control thread has ended
[2025-06-04 11:23:14] 2025-06-04 15:23:14,295 | INFO     | all workflow threads have been joined
[2025-06-04 11:23:14] 2025-06-04 15:23:14,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:23:14] 2025-06-04 15:23:14,296 | INFO     | traces error code: 0
[2025-06-04 11:23:14] 2025-06-04 15:23:14,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:23:14] 2025-06-04 15:23:14,385 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:23:14] 2025-06-04 15:23:14,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:23:14] 2025-06-04 15:23:14,393 [wrapper] pilotpid: 27372
[2025-06-04 11:23:14] 2025-06-04 15:23:14,397 [wrapper] Pilot exit status: 0
[2025-06-04 11:23:14] 2025-06-04 15:23:14,412 [wrapper] pandaids: 6666806633
[2025-06-04 11:23:14] 2025-06-04 15:23:14,448 [wrapper] cleanup supervisor_pilot  5102 27373
[2025-06-04 11:23:14] 2025-06-04 15:23:14,452 [wrapper] Test setup, not cleaning
[2025-06-04 11:23:14] 2025-06-04 15:23:14,455 [wrapper] apfmon messages muted
[2025-06-04 11:23:14] 2025-06-04 15:23:14,459 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:23:14] 2025-06-04 15:23:14,462 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:23:14]  *** Error codes and diagnostics ***
[2025-06-04 11:23:14]     "exeErrorCode": 0,
[2025-06-04 11:23:14]     "exeErrorDiag": "",
[2025-06-04 11:23:14]     "pilotErrorCode": 0,
[2025-06-04 11:23:14]     "pilotErrorDiag": "",
[2025-06-04 11:23:14]  *** Listing of results directory ***
[2025-06-04 11:23:14] total 419072
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas    495897 May 27 02:07 pilot3.tar.gz
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas      5111 May 27 02:24 queuedata.json
[2025-06-04 11:23:14] -rwx------ 1 boincer umatlas     37140 May 27 02:26 runpilot2-wrapper.sh
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:23:14] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:56 run_atlas
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:56 job.xml
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas 223214883 Jun  4 09:56 EVNT.44871834._002504.pool.root.1
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:56 start_atlas.sh
[2025-06-04 11:23:14] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:56 shared
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 09:56 input.tar.gz
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:56 boinc_lockfile
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 09:56 pandaJob.out
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas    986819 Jun  4 09:56 agis_schedconf.cvmfs.json
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas   1598969 Jun  4 09:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:23:14] drwx------ 4 boincer umatlas      4096 Jun  4 09:56 pilot3
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 11:21 init_data.xml
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas 200378913 Jun  4 11:22 HITS.44871837._063492.pool.root.1
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:22 boinc_task_state.xml
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas        95 Jun  4 11:22 pilot_heartbeat.json
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas      1050 Jun  4 11:22 memory_monitor_summary.json
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas    361386 Jun  4 11:22 log.44871837._063492.job.log.tgz.1
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas      7756 Jun  4 11:22 heartbeat.json
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:22 wrapper_checkpoint.txt
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:22 boinc_mmap_file
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas      4611 Jun  4 11:23 pilotlog.txt
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas    488266 Jun  4 11:23 log.44871837._063492.job.log.1
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas       357 Jun  4 11:23 output.list
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:23 runtime_log
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas    870400 Jun  4 11:23 result.tar.gz
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas       659 Jun  4 11:23 z4TMDmkw2d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSlYKDm8hT2Ho.diag
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 11:23 runtime_log.err
[2025-06-04 11:23:14] -rw-r--r-- 1 boincer umatlas     21285 Jun  4 11:23 stderr.txt
[2025-06-04 11:23:14] HITS file was successfully produced:
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas 200378913 Jun  4 11:22 shared/HITS.pool.root.1
[2025-06-04 11:23:14]  *** Contents of shared directory: ***
[2025-06-04 11:23:14] total 415044
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas 223214883 Jun  4 09:56 ATLAS.root_0
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:56 start_atlas.sh
[2025-06-04 11:23:14] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 09:56 input.tar.gz
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas 200378913 Jun  4 11:22 HITS.pool.root.1
[2025-06-04 11:23:14] -rw------- 1 boincer umatlas    870400 Jun  4 11:23 result.tar.gz
11:23:15 (23773): run_atlas exited; CPU time 56082.506419
11:23:15 (23773): called boinc_finish(0)

</stderr_txt>
]]>

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