Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:57:08 (12420): wrapper (7.7.26015): starting
09:57:08 (12420): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:57:08] Arguments: --nthreads 8
[2025-06-04 09:57:08] Threads: 8
[2025-06-04 09:57:08] Checking for CVMFS
[2025-06-04 09:57:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:57:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:57:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:57:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:57:11] 2.11.2.0 5091 18703 338808 146781 2 198 16653631 18432001 12543 130560 0 67702961 99.620 51077072 26925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:57:11] CVMFS is ok
[2025-06-04 09:57:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:57:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:57:11] Further information can be found at the LHC@home message board.
[2025-06-04 09:57:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:57:11] Checking for apptainer binary...
[2025-06-04 09:57:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:57:11] Running /usr/bin/apptainer --version
[2025-06-04 09:57:11] apptainer version 1.3.2-1.el7
[2025-06-04 09:57:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:57:20] c-210-41.aglt2.org
[2025-06-04 09:57:20] apptainer works
[2025-06-04 09:57:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:57:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:57:20] Starting ATLAS job with PandaID=6679381502
[2025-06-04 09:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:41:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:41:04]  replicas=None
[2025-06-04 11:41:04]  scope=mc23_13p6TeV
[2025-06-04 11:41:04]  status=None
[2025-06-04 11:41:04]  status_code=0
[2025-06-04 11:41:04]  storage_token=
[2025-06-04 11:41:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679381502/log.45006595._056242.job.log.tgz.1
[2025-06-04 11:41:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/6f/log.45006595._056242.job.log.tgz.1
[2025-06-04 11:41:04]  workdir=None
[2025-06-04 11:41:04] ]
[2025-06-04 11:41:04] 2025-06-04 15:40:37,449 | INFO     | transferring file log.45006595._056242.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679381502/log.45006595._056242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:41:04] 2025-06-04 15:40:37,449 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679381502/log.45006595._056242.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056242.job
[2025-06-04 11:41:04] 2025-06-04 15:40:37,504 | INFO     | adding to output.list: log.45006595._056242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/6f/log.45006595._056242.job.log.tg
[2025-06-04 11:41:04] 2025-06-04 15:40:37,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:41:04] 2025-06-04 15:40:37,504 | INFO     | summary of transferred files:
[2025-06-04 11:41:04] 2025-06-04 15:40:37,504 | INFO     |  -- lfn=log.45006595._056242.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:41:04] 2025-06-04 15:40:37,504 | INFO     | stage-out finished correctly
[2025-06-04 11:41:04] 2025-06-04 15:40:37,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:41:04] 2025-06-04 15:40:38,628 | INFO     | job 6679381502 has state=finished
[2025-06-04 11:41:04] 2025-06-04 15:40:38,629 | INFO     | preparing for final server update for job 6679381502 in state='finished'
[2025-06-04 11:41:04] 2025-06-04 15:40:38,681 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:41:04] 2025-06-04 15:40:38,681 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:41:04] 2025-06-04 15:40:38,681 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:41:04] 2025-06-04 15:40:38,682 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:41:04] 2025-06-04 15:40:38,682 | INFO     | job 6679381502 has finished - writing final server update
[2025-06-04 11:41:04] 2025-06-04 15:40:38,682 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:41:04] 2025-06-04 15:40:38,685 | INFO     | executing command: lscpu
[2025-06-04 11:41:04] 2025-06-04 15:40:38,800 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:41:04] 2025-06-04 15:40:40,572 | WARNING  | process 26292 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:41:04] 2025-06-04 15:40:40,572 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679381502/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:41:04] 2025-06-04 15:40:40,691 | INFO     | number of running child processes to parent process 26292: 1
[2025-06-04 11:41:04] 2025-06-04 15:40:40,692 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:41:04] 2025-06-04 15:40:43,194 | INFO     | monitor loop #472: job 0:6679381502 is in state 'finished'
[2025-06-04 11:41:04] 2025-06-04 15:40:43,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:41:04] 2025-06-04 15:40:45,697 | INFO     | monitor loop #473: job 0:6679381502 is in state 'finished'
[2025-06-04 11:41:04] 2025-06-04 15:40:45,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:41:04] 2025-06-04 15:40:48,200 | INFO     | monitor loop #474: job 0:6679381502 is in state 'finished'
[2025-06-04 11:41:04] 2025-06-04 15:40:48,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:41:04] 2025-06-04 15:40:50,703 | INFO     | monitor loop #475: job 0:6679381502 is in state 'finished'
[2025-06-04 11:41:04] 2025-06-04 15:40:50,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:41:04] 2025-06-04 15:40:50,808 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:41:04] 2025-06-04 15:40:50,808 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679381502/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:41:04] 2025-06-04 15:40:50,809 | INFO     | extracted standard info from prmon json
[2025-06-04 11:41:04] 2025-06-04 15:40:50,809 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:41:04] 2025-06-04 15:40:50,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:41:04] 2025-06-04 15:40:50,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:41:04] 2025-06-04 15:40:50,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:41:04] 2025-06-04 15:40:50,810 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:41:04] 2025-06-04 15:40:50,810 | INFO     | sum of square deviations: 226017540.22222188
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | sum of deviations: 52539009.000000075
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | mean x: 1749048782.5555556
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | mean y: 2483733.4
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | -- intersect: -404092188.26420116
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | intersect: -404092188.26420116
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | chi2: 0.021886277633338037
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | -- intersect: -404092188.26420116
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | current memory leak: 0.23 B/s (using 90 data points, chi2=0.02)
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | ..............................
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | . Timing measurements:
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | . get job = 0 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | . initial setup = 5 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | . payload setup = 75 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,811 | INFO     | . stage-in = 0 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,812 | INFO     | . payload execution = 5914 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,812 | INFO     | . stage-out = 1 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,812 | INFO     | . log creation = 0 s
[2025-06-04 11:41:04] 2025-06-04 15:40:50,812 | INFO     | ..............................
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | 
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | job summary report
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | --------------------------------------------------
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | PanDA job id: 6679381502
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | task id: 45006595
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | errors: (none)
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | pilot state: finished 
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | transexitcode: 0
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | exeerrorcode: 0
[2025-06-04 11:41:04] 2025-06-04 15:40:51,173 | INFO     | exeerrordiag: 
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | exitcode: 0
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | exitmsg: OK
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | cpuconsumptiontime: 30150 s
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | nevents: 400
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | neventsw: 0
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | pid: 26292
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | pgrp: 26292
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | corecount: 8
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | event service: False
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | sizes: {0: 2397121, 1: 2397320, 12: 2397320, 22: 2397348, 33: 2397376, 44: 2397794, 54: 2397794, 5994: 2424374, 5996: 2433315, 5997: 2433371, 6010: 2433541}
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | --------------------------------------------------
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | 
[2025-06-04 11:41:04] 2025-06-04 15:40:51,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | job 6679381502 has completed (purged errors)
[2025-06-04 11:41:04] 2025-06-04 15:40:51,204 | INFO     | overall cleanup function is called
[2025-06-04 11:41:04] 2025-06-04 15:40:52,212 | INFO     | --- collectZombieJob: --- 10, [26292]
[2025-06-04 11:41:04] 2025-06-04 15:40:52,212 | INFO     | zombie collector waiting for pid 26292
[2025-06-04 11:41:04] 2025-06-04 15:40:52,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:41:04] 2025-06-04 15:40:52,212 | INFO     | collected zombie processes
[2025-06-04 11:41:04] 2025-06-04 15:40:52,212 | INFO     | will attempt to kill all subprocesses of pid=26292
[2025-06-04 11:41:04] 2025-06-04 15:40:52,320 | INFO     | process IDs to be killed: [26292] (in reverse order)
[2025-06-04 11:41:04] 2025-06-04 15:40:52,575 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:41:04] 2025-06-04 15:40:52,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:41:04] 2025-06-04 15:40:52,580 | INFO     | did not find any defunct processes belonging to 26292
[2025-06-04 11:41:04] 2025-06-04 15:40:52,582 | INFO     | did not find any defunct processes belonging to 26292
[2025-06-04 11:41:04] 2025-06-04 15:40:52,582 | INFO     | ready for new job
[2025-06-04 11:41:04] 2025-06-04 15:40:52,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:41:04] 2025-06-04 15:40:52,583 | INFO     | **************************************
[2025-06-04 11:41:04] 2025-06-04 15:40:52,583 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:41:04] 2025-06-04 15:40:52,584 | INFO     | **************************************
[2025-06-04 11:41:04] 2025-06-04 15:40:52,584 | INFO     | 
[2025-06-04 11:41:04] 2025-06-04 15:40:52,586 | INFO     | architecture information:
[2025-06-04 11:41:04] 2025-06-04 15:40:52,586 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:41:04] 2025-06-04 15:40:52,710 | INFO     | cat /etc/os-release:
[2025-06-04 11:41:04] NAME="CentOS Linux"
[2025-06-04 11:41:04] VERSION="7 (Core)"
[2025-06-04 11:41:04] ID="centos"
[2025-06-04 11:41:04] ID_LIKE="rhel fedora"
[2025-06-04 11:41:04] VERSION_ID="7"
[2025-06-04 11:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:41:04] ANSI_COLOR="0;31"
[2025-06-04 11:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:41:04] HOME_URL="https://www.centos.org/"
[2025-06-04 11:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:41:04] 
[2025-06-04 11:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:41:04] 
[2025-06-04 11:41:04] 2025-06-04 15:40:52,710 | INFO     | **************************************
[2025-06-04 11:41:04] 2025-06-04 15:40:53,213 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:41:04] 2025-06-04 15:40:53,295 | INFO     | sufficient remaining disk space (76710674432 B)
[2025-06-04 11:41:04] 2025-06-04 15:40:53,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:41:04] 2025-06-04 15:40:53,296 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:41:04] 2025-06-04 15:40:53,296 | INFO     | update_server=False
[2025-06-04 11:41:04] 2025-06-04 15:40:53,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:41:04] 2025-06-04 15:40:53,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:41:04] 2025-06-04 15:40:53,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:41:04] 2025-06-04 15:40:53,934 | INFO     | PID=18697 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:41:04] 2025-06-04 15:40:53,934 | INFO     | .. there are 10 such processes running
[2025-06-04 11:41:04] 2025-06-04 15:40:53,935 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:41:04] 2025-06-04 15:40:53,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:41:04] 2025-06-04 15:40:53,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:41:04] 2025-06-04 15:40:53,944 | INFO     | all data control threads have been joined
[2025-06-04 11:41:04] 2025-06-04 15:40:54,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:41:04] 2025-06-04 15:40:54,211 | INFO     | aborting loop
[2025-06-04 11:41:04] 2025-06-04 15:40:54,301 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,488 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,503 | INFO     | [job] validate thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,621 | INFO     | all job control threads have been joined
[2025-06-04 11:41:04] 2025-06-04 15:40:54,627 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,627 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,645 | INFO     | all payload control threads have been joined
[2025-06-04 11:41:04] 2025-06-04 15:40:54,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:54,949 | INFO     | [data] control thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,217 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,302 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,354 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,475 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,619 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,626 | INFO     | [job] control thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,650 | INFO     | [payload] control thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:55,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:41:04] 2025-06-04 15:40:56,892 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:57,302 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:41:04] 2025-06-04 15:40:58,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601504515904)>', '<ExcThread(monitor, started 140600988923648)>']
[2025-06-04 11:41:04] 2025-06-04 15:40:58,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:41:04] 2025-06-04 15:40:58,960 | INFO     | [monitor] control thread has ended
[2025-06-04 11:41:04] 2025-06-04 15:41:03,311 | INFO     | all workflow threads have been joined
[2025-06-04 11:41:04] 2025-06-04 15:41:03,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:41:04] 2025-06-04 15:41:03,311 | INFO     | traces error code: 0
[2025-06-04 11:41:04] 2025-06-04 15:41:03,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:41:04] 2025-06-04 15:41:03,442 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:41:04] 2025-06-04 15:41:03,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:41:04] 2025-06-04 15:41:03,522 [wrapper] pilotpid: 18697
[2025-06-04 11:41:04] 2025-06-04 15:41:03,568 [wrapper] Pilot exit status: 0
[2025-06-04 11:41:04] 2025-06-04 15:41:03,651 [wrapper] pandaids: 6679381502
[2025-06-04 11:41:04] 2025-06-04 15:41:03,701 [wrapper] cleanup supervisor_pilot 58032 18698
[2025-06-04 11:41:04] 2025-06-04 15:41:03,704 [wrapper] Test setup, not cleaning
[2025-06-04 11:41:04] 2025-06-04 15:41:03,726 [wrapper] apfmon messages muted
[2025-06-04 11:41:04] 2025-06-04 15:41:03,728 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:41:04] 2025-06-04 15:41:03,730 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:41:04]  *** Error codes and diagnostics ***
[2025-06-04 11:41:04]     "exeErrorCode": 0,
[2025-06-04 11:41:04]     "exeErrorDiag": "",
[2025-06-04 11:41:04]     "pilotErrorCode": 0,
[2025-06-04 11:41:04]     "pilotErrorDiag": "",
[2025-06-04 11:41:04]  *** Listing of results directory ***
[2025-06-04 11:41:04] total 393964
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:41:04] -rwx------ 1 boincer umatlas     37140 Jun  4 05:01 runpilot2-wrapper.sh
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 05:01 queuedata.json
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:41:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:57 run_atlas
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:57 job.xml
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas 216096826 Jun  4 09:57 EVNT.45006593._001444.pool.root.1
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:57 start_atlas.sh
[2025-06-04 11:41:04] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:57 shared
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 09:57 input.tar.gz
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:57 boinc_lockfile
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:57 pandaJob.out
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas    986819 Jun  4 09:58 agis_schedconf.cvmfs.json
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas   1598969 Jun  4 09:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:41:04] drwx------ 4 boincer umatlas      4096 Jun  4 09:59 pilot3
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:40 boinc_task_state.xml
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas 181689406 Jun  4 11:40 HITS.45006595._056242.pool.root.1
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas      1063 Jun  4 11:40 memory_monitor_summary.json
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas    328699 Jun  4 11:40 log.45006595._056242.job.log.tgz.1
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas      6252 Jun  4 11:40 init_data.xml
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas      7733 Jun  4 11:40 heartbeat.json
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas        95 Jun  4 11:40 pilot_heartbeat.json
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:40 boinc_mmap_file
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:40 wrapper_checkpoint.txt
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas      4746 Jun  4 11:41 pilotlog.txt
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas    571201 Jun  4 11:41 log.45006595._056242.job.log.1
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas       357 Jun  4 11:41 output.list
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:41 runtime_log
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas    921600 Jun  4 11:41 result.tar.gz
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:41 runtime_log.err
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas       658 Jun  4 11:41 iMbKDmZBzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnunKDm8U7LRn.diag
[2025-06-04 11:41:04] -rw-r--r-- 1 boincer umatlas     21936 Jun  4 11:41 stderr.txt
[2025-06-04 11:41:04] HITS file was successfully produced:
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas 181689406 Jun  4 11:40 shared/HITS.pool.root.1
[2025-06-04 11:41:04]  *** Contents of shared directory: ***
[2025-06-04 11:41:04] total 389888
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas 216096826 Jun  4 09:57 ATLAS.root_0
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:57 start_atlas.sh
[2025-06-04 11:41:04] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 09:57 input.tar.gz
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas 181689406 Jun  4 11:40 HITS.pool.root.1
[2025-06-04 11:41:04] -rw------- 1 boincer umatlas    921600 Jun  4 11:41 result.tar.gz
11:41:06 (12420): run_atlas exited; CPU time 29777.911619
11:41:06 (12420): called boinc_finish(0)

</stderr_txt>
]]>

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