Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:41 (2249095): wrapper (7.7.26015): starting
10:01:41 (2249095): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:01:41] Arguments: --nthreads 8
[2025-06-04 10:01:41] Threads: 8
[2025-06-04 10:01:41] Checking for CVMFS
[2025-06-04 10:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:01:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:01:42] 2.12.6.0 213643 32312 560196 146781 3 667 35967702 40960000 20623 16776704 0 395573234 99.753 246624730 23304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:01:42] CVMFS is ok
[2025-06-04 10:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:01:42] Further information can be found at the LHC@home message board.
[2025-06-04 10:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:01:42] Checking for apptainer binary...
[2025-06-04 10:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:01:42] Running /usr/bin/apptainer --version
[2025-06-04 10:01:42] apptainer version 1.4.1-1.el9
[2025-06-04 10:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:01:42] c7-2-17.aglt2.org
[2025-06-04 10:01:42] apptainer works
[2025-06-04 10:01:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:01:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:01:42] Starting ATLAS job with PandaID=6679238041
[2025-06-04 10:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:03:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:03:15]  is_altstaged=None
[2025-06-04 11:03:15]  is_tar=False
[2025-06-04 11:03:15]  lfn=log.45006595._056049.job.log.tgz.1
[2025-06-04 11:03:15]  mtime=0
[2025-06-04 11:03:15]  protocol_id=None
[2025-06-04 11:03:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:03:15]  replicas=None
[2025-06-04 11:03:15]  scope=mc23_13p6TeV
[2025-06-04 11:03:15]  status=None
[2025-06-04 11:03:15]  status_code=0
[2025-06-04 11:03:15]  storage_token=
[2025-06-04 11:03:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679238041/log.45006595._056049.job.log.tgz.1
[2025-06-04 11:03:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/6d/log.45006595._056049.job.log.tgz.1
[2025-06-04 11:03:15]  workdir=None
[2025-06-04 11:03:15] ]
[2025-06-04 11:03:15] 2025-06-04 15:02:47,066 | INFO     | transferring file log.45006595._056049.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679238041/log.45006595._056049.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:03:15] 2025-06-04 15:02:47,066 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679238041/log.45006595._056049.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056049.job
[2025-06-04 11:03:15] 2025-06-04 15:02:47,088 | INFO     | adding to output.list: log.45006595._056049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/6d/log.45006595._056049.job.log.tg
[2025-06-04 11:03:15] 2025-06-04 15:02:47,089 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:03:15] 2025-06-04 15:02:47,089 | INFO     | summary of transferred files:
[2025-06-04 11:03:15] 2025-06-04 15:02:47,089 | INFO     |  -- lfn=log.45006595._056049.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:03:15] 2025-06-04 15:02:47,089 | INFO     | stage-out finished correctly
[2025-06-04 11:03:15] 2025-06-04 15:02:48,305 | INFO     | PID=2255559 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 11:03:15] 2025-06-04 15:02:48,305 | INFO     | .. there are 38 such processes running
[2025-06-04 11:03:15] 2025-06-04 15:02:50,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:03:15] 2025-06-04 15:02:50,837 | INFO     | job 6679238041 has state=finished
[2025-06-04 11:03:15] 2025-06-04 15:02:50,838 | INFO     | preparing for final server update for job 6679238041 in state='finished'
[2025-06-04 11:03:15] 2025-06-04 15:02:50,838 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:03:15] 2025-06-04 15:02:50,839 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:03:15] 2025-06-04 15:02:50,839 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:03:15] 2025-06-04 15:02:50,839 | INFO     | job 6679238041 has finished - writing final server update
[2025-06-04 11:03:15] 2025-06-04 15:02:50,839 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:03:15] 2025-06-04 15:02:50,859 | INFO     | executing command: lscpu
[2025-06-04 11:03:15] 2025-06-04 15:02:50,955 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:03:15] 2025-06-04 15:02:51,192 | WARNING  | process 2276036 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:03:15] 2025-06-04 15:02:51,192 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679238041/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:03:15] 2025-06-04 15:02:51,668 | INFO     | number of running child processes to parent process 2276036: 1
[2025-06-04 11:03:15] 2025-06-04 15:02:51,668 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:03:15] 2025-06-04 15:02:54,173 | INFO     | monitor loop #265: job 0:6679238041 is in state 'finished'
[2025-06-04 11:03:15] 2025-06-04 15:02:54,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,028 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:03:15] 2025-06-04 15:02:55,028 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679238041/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,029 | INFO     | extracted standard info from prmon json
[2025-06-04 11:03:15] 2025-06-04 15:02:55,029 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:03:15] 2025-06-04 15:02:55,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:03:15] 2025-06-04 15:02:55,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:03:15] 2025-06-04 15:02:55,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | sum of deviations: 5077033415.999999
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | mean x: 1749047626.0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | mean y: 2172520.754716981
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | -- intersect: -192422280249.48462
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | intersect: -192422280249.48462
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | chi2: 0.8062311533345446
[2025-06-04 11:03:15] 2025-06-04 15:02:55,031 | INFO     | -- intersect: -192422280249.48462
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | current memory leak: 110.02 B/s (using 53 data points, chi2=0.81)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | ..............................
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . Timing measurements:
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . get job = 0 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . initial setup = 2 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . payload setup = 5 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . stage-in = 0 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . payload execution = 3630 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . stage-out = 0 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | . log creation = 0 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,032 | INFO     | ..............................
[2025-06-04 11:03:15] 2025-06-04 15:02:55,106 | INFO     | 
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | job summary report
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | --------------------------------------------------
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | PanDA job id: 6679238041
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | task id: 45006595
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | errors: (none)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | pilot state: finished 
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | transexitcode: 0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | exeerrorcode: 0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | exeerrordiag: 
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | exitcode: 0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | exitmsg: OK
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | cpuconsumptiontime: 24135 s
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | nevents: 400
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | neventsw: 0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | pid: 2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | pgrp: 2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:55,107 | INFO     | corecount: 8
[2025-06-04 11:03:15] 2025-06-04 15:02:55,108 | INFO     | event service: False
[2025-06-04 11:03:15] 2025-06-04 15:02:55,108 | INFO     | sizes: {0: 2397292, 4: 2397498, 11: 2397526, 3639: 2423210, 3641: 2432151, 3644: 2432207, 3649: 2432505}
[2025-06-04 11:03:15] 2025-06-04 15:02:55,108 | INFO     | --------------------------------------------------
[2025-06-04 11:03:15] 2025-06-04 15:02:55,108 | INFO     | 
[2025-06-04 11:03:15] 2025-06-04 15:02:55,108 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:03:15] 2025-06-04 15:02:55,129 | INFO     | job 6679238041 has completed (purged errors)
[2025-06-04 11:03:15] 2025-06-04 15:02:55,130 | INFO     | overall cleanup function is called
[2025-06-04 11:03:15] 2025-06-04 15:02:56,137 | INFO     | --- collectZombieJob: --- 10, [2276036]
[2025-06-04 11:03:15] 2025-06-04 15:02:56,137 | INFO     | zombie collector waiting for pid 2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:56,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:03:15] 2025-06-04 15:02:56,138 | INFO     | collected zombie processes
[2025-06-04 11:03:15] 2025-06-04 15:02:56,138 | INFO     | will attempt to kill all subprocesses of pid=2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:56,655 | INFO     | process IDs to be killed: [2276036] (in reverse order)
[2025-06-04 11:03:15] 2025-06-04 15:02:56,832 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:03:15] 2025-06-04 15:02:56,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:03:15] 2025-06-04 15:02:56,859 | INFO     | did not find any defunct processes belonging to 2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:56,884 | INFO     | did not find any defunct processes belonging to 2276036
[2025-06-04 11:03:15] 2025-06-04 15:02:56,885 | INFO     | ready for new job
[2025-06-04 11:03:15] 2025-06-04 15:02:56,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:03:15] 2025-06-04 15:02:56,887 | INFO     | **************************************
[2025-06-04 11:03:15] 2025-06-04 15:02:56,887 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:03:15] 2025-06-04 15:02:56,887 | INFO     | **************************************
[2025-06-04 11:03:15] 2025-06-04 15:02:56,887 | INFO     | 
[2025-06-04 11:03:15] 2025-06-04 15:02:56,905 | INFO     | architecture information:
[2025-06-04 11:03:15] 2025-06-04 15:02:56,905 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:03:15] 2025-06-04 15:02:56,921 | INFO     | cat /etc/os-release:
[2025-06-04 11:03:15] NAME="CentOS Linux"
[2025-06-04 11:03:15] VERSION="7 (Core)"
[2025-06-04 11:03:15] ID="centos"
[2025-06-04 11:03:15] ID_LIKE="rhel fedora"
[2025-06-04 11:03:15] VERSION_ID="7"
[2025-06-04 11:03:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:03:15] ANSI_COLOR="0;31"
[2025-06-04 11:03:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:03:15] HOME_URL="https://www.centos.org/"
[2025-06-04 11:03:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:03:15] 
[2025-06-04 11:03:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:03:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:03:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:03:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:03:15] 
[2025-06-04 11:03:15] 2025-06-04 15:02:56,922 | INFO     | **************************************
[2025-06-04 11:03:15] 2025-06-04 15:02:57,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:03:15] 2025-06-04 15:02:57,447 | INFO     | sufficient remaining disk space (128625672192 B)
[2025-06-04 11:03:15] 2025-06-04 15:02:57,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:03:15] 2025-06-04 15:02:57,447 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:03:15] 2025-06-04 15:02:57,447 | INFO     | update_server=False
[2025-06-04 11:03:15] 2025-06-04 15:02:57,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:03:15] 2025-06-04 15:02:57,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:03:15] 2025-06-04 15:02:57,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:03:15] 2025-06-04 15:02:57,681 | INFO     | aborting loop
[2025-06-04 11:03:15] 2025-06-04 15:02:57,864 | INFO     | all job control threads have been joined
[2025-06-04 11:03:15] 2025-06-04 15:02:58,160 | INFO     | all payload control threads have been joined
[2025-06-04 11:03:15] 2025-06-04 15:02:58,336 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:03:15] 2025-06-04 15:02:58,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:03:15] 2025-06-04 15:02:58,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:03:15] 2025-06-04 15:02:58,453 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,468 | INFO     | all data control threads have been joined
[2025-06-04 11:03:15] 2025-06-04 15:02:58,512 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,684 | INFO     | [job] validate thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,686 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,869 | INFO     | [job] control thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,888 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:58,983 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:59,167 | INFO     | [payload] control thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:59,393 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:59,473 | INFO     | [data] control thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:59,681 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:02:59,881 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:03:00,022 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:03:00,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:03:15] 2025-06-04 15:03:00,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:03:15] 2025-06-04 15:03:01,120 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:03:04,654 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:03:08,167 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:03:15] 2025-06-04 15:03:09,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:03:15] 2025-06-04 15:03:09,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978821261120)>', '<ExcThread(monitor, started 139978193487616)>']
[2025-06-04 11:03:15] 2025-06-04 15:03:10,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:03:15] 2025-06-04 15:03:10,391 | INFO     | [monitor] control thread has ended
[2025-06-04 11:03:15] 2025-06-04 15:03:14,678 | INFO     | all workflow threads have been joined
[2025-06-04 11:03:15] 2025-06-04 15:03:14,678 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:03:15] 2025-06-04 15:03:14,679 | INFO     | traces error code: 0
[2025-06-04 11:03:15] 2025-06-04 15:03:14,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:03:15] 2025-06-04 15:03:14,841 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:03:15] 2025-06-04 15:03:14,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:03:15] 2025-06-04 15:03:14,847 [wrapper] pilotpid: 2255559
[2025-06-04 11:03:15] 2025-06-04 15:03:14,849 [wrapper] Pilot exit status: 0
[2025-06-04 11:03:15] 2025-06-04 15:03:14,860 [wrapper] pandaids: 6679238041
[2025-06-04 11:03:15] 2025-06-04 15:03:14,944 [wrapper] cleanup supervisor_pilot 3073058 2255560
[2025-06-04 11:03:15] 2025-06-04 15:03:14,947 [wrapper] Test setup, not cleaning
[2025-06-04 11:03:15] 2025-06-04 15:03:14,949 [wrapper] apfmon messages muted
[2025-06-04 11:03:15] 2025-06-04 15:03:14,951 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:03:15] 2025-06-04 15:03:14,954 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:03:15]  *** Error codes and diagnostics ***
[2025-06-04 11:03:15]     "exeErrorCode": 0,
[2025-06-04 11:03:15]     "exeErrorDiag": "",
[2025-06-04 11:03:15]     "pilotErrorCode": 0,
[2025-06-04 11:03:15]     "pilotErrorDiag": "",
[2025-06-04 11:03:15]  *** Listing of results directory ***
[2025-06-04 11:03:15] total 392868
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:03:15] -rwx------. 1 boincer umatlas     37140 Jun  4 04:56 runpilot2-wrapper.sh
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:56 queuedata.json
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:03:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:01 run_atlas
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:01 job.xml
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas 213151324 Jun  4 10:01 EVNT.45006593._001561.pool.root.1
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:01 start_atlas.sh
[2025-06-04 11:03:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:01 shared
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:01 input.tar.gz
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:01 boinc_lockfile
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 10:01 pandaJob.out
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas    986819 Jun  4 10:01 agis_schedconf.cvmfs.json
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:03:15] drwx------. 4 boincer umatlas      4096 Jun  4 10:01 pilot3
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas      6935 Jun  4 10:54 init_data.xml
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:02 boinc_task_state.xml
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas 183980570 Jun  4 11:02 HITS.45006595._056049.pool.root.1
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas      1031 Jun  4 11:02 memory_monitor_summary.json
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas    294297 Jun  4 11:02 log.45006595._056049.job.log.tgz.1
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas        95 Jun  4 11:02 pilot_heartbeat.json
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas      7690 Jun  4 11:02 heartbeat.json
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:03 boinc_mmap_file
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:03 wrapper_checkpoint.txt
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas      4426 Jun  4 11:03 pilotlog.txt
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas    371131 Jun  4 11:03 log.45006595._056049.job.log.1
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas       357 Jun  4 11:03 output.list
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:03 runtime_log
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas    686080 Jun  4 11:03 result.tar.gz
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 11:03 runtime_log.err
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas       651 Jun  4 11:03 aBBMDm45yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbrnKDm4h56Pn.diag
[2025-06-04 11:03:15] -rw-r--r--. 1 boincer umatlas     21475 Jun  4 11:03 stderr.txt
[2025-06-04 11:03:15] HITS file was successfully produced:
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas 183980570 Jun  4 11:02 shared/HITS.pool.root.1
[2025-06-04 11:03:15]  *** Contents of shared directory: ***
[2025-06-04 11:03:15] total 389024
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas 213151324 Jun  4 10:01 ATLAS.root_0
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:01 start_atlas.sh
[2025-06-04 11:03:15] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:01 input.tar.gz
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas 183980570 Jun  4 11:02 HITS.pool.root.1
[2025-06-04 11:03:15] -rw-------. 1 boincer umatlas    686080 Jun  4 11:03 result.tar.gz
11:03:17 (2249095): run_atlas exited; CPU time 24279.687288
11:03:17 (2249095): called boinc_finish(0)

</stderr_txt>
]]>

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