Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:10:41 (275554): wrapper (7.7.26015): starting
10:10:41 (275554): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 10:10:41] Arguments: --nthreads 9
[2025-06-04 10:10:41] Threads: 9
[2025-06-04 10:10:41] Checking for CVMFS
[2025-06-04 10:10:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:10:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:10:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:10:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:10:42] 2.11.2.0 6612 28885 237028 146781 2 194 16967727 18432001 8160 130560 0 66030226 99.513 66283241 28133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:10:42] CVMFS is ok
[2025-06-04 10:10:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:10:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:10:42] Further information can be found at the LHC@home message board.
[2025-06-04 10:10:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:10:42] Checking for apptainer binary...
[2025-06-04 10:10:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:10:42] Running /usr/bin/apptainer --version
[2025-06-04 10:10:42] apptainer version 1.3.2-1.el7
[2025-06-04 10:10:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:10:44] c-210-31-1.aglt2.org
[2025-06-04 10:10:44] apptainer works
[2025-06-04 10:10:44] Set ATHENA_PROC_NUMBER=9
[2025-06-04 10:10:44] Set ATHENA_CORE_NUMBER=9
[2025-06-04 10:10:44] Starting ATLAS job with PandaID=6678287208
[2025-06-04 10:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:40:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:40:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/2e/log.45006595._051855.job.log.tgz.1
[2025-06-04 11:40:59]  workdir=None
[2025-06-04 11:40:59] ]
[2025-06-04 11:40:59] 2025-06-04 15:40:22,307 | INFO     | transferring file log.45006595._051855.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678287208/log.45006595._051855.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:40:59] 2025-06-04 15:40:22,308 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678287208/log.45006595._051855.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051855.job
[2025-06-04 11:40:59] 2025-06-04 15:40:22,331 | INFO     | adding to output.list: log.45006595._051855.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/2e/log.45006595._051855.job.log.tg
[2025-06-04 11:40:59] 2025-06-04 15:40:22,332 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:40:59] 2025-06-04 15:40:22,332 | INFO     | summary of transferred files:
[2025-06-04 11:40:59] 2025-06-04 15:40:22,332 | INFO     |  -- lfn=log.45006595._051855.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:40:59] 2025-06-04 15:40:22,332 | INFO     | stage-out finished correctly
[2025-06-04 11:40:59] 2025-06-04 15:40:22,730 | INFO     | monitor loop #401: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:22,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:23,356 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:40:59] 2025-06-04 15:40:25,235 | INFO     | monitor loop #402: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:25,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:25,623 | INFO     | job 6678287208 has state=finished
[2025-06-04 11:40:59] 2025-06-04 15:40:25,623 | INFO     | preparing for final server update for job 6678287208 in state='finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:25,623 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:40:59] 2025-06-04 15:40:25,624 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:40:59] 2025-06-04 15:40:25,624 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:40:59] 2025-06-04 15:40:25,624 | INFO     | job 6678287208 has finished - writing final server update
[2025-06-04 11:40:59] 2025-06-04 15:40:25,624 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:40:59] 2025-06-04 15:40:25,628 | INFO     | executing command: lscpu
[2025-06-04 11:40:59] 2025-06-04 15:40:25,694 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:40:59] 2025-06-04 15:40:27,740 | INFO     | monitor loop #403: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:27,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:30,246 | INFO     | monitor loop #404: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:30,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:32,751 | INFO     | monitor loop #405: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:32,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:35,256 | INFO     | monitor loop #406: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:35,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:37,761 | INFO     | monitor loop #407: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:37,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:40,264 | INFO     | monitor loop #408: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:40,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:42,767 | INFO     | monitor loop #409: job 0:6678287208 is in state 'finished'
[2025-06-04 11:40:59] 2025-06-04 15:40:42,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,346 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:40:59] 2025-06-04 15:40:43,346 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678287208/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,347 | INFO     | extracted standard info from prmon json
[2025-06-04 11:40:59] 2025-06-04 15:40:43,347 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:40:59] 2025-06-04 15:40:43,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:40:59] 2025-06-04 15:40:43,348 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:40:59] 2025-06-04 15:40:43,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:40:59] 2025-06-04 15:40:43,350 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:40:59] 2025-06-04 15:40:43,351 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,351 | INFO     | sum of deviations: -681495446.5
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | mean x: 1749049037.5
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | mean y: 2531767.0375
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | -- intersect: 7511571858.42753
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | intersect: 7511571858.42753
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | chi2: 0.02530285893453849
[2025-06-04 11:40:59] 2025-06-04 15:40:43,352 | INFO     | -- intersect: 7511571858.42753
[2025-06-04 11:40:59] 2025-06-04 15:40:43,353 | INFO     | current memory leak: -4.29 B/s (using 80 data points, chi2=0.03)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,353 | INFO     | ..............................
[2025-06-04 11:40:59] 2025-06-04 15:40:43,353 | INFO     | . Timing measurements:
[2025-06-04 11:40:59] 2025-06-04 15:40:43,353 | INFO     | . get job = 0 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,353 | INFO     | . initial setup = 2 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | . payload setup = 16 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | . stage-in = 0 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | . payload execution = 5313 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | . stage-out = 0 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | . log creation = 0 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,354 | INFO     | ..............................
[2025-06-04 11:40:59] 2025-06-04 15:40:43,666 | INFO     | 
[2025-06-04 11:40:59] 2025-06-04 15:40:43,667 | INFO     | job summary report
[2025-06-04 11:40:59] 2025-06-04 15:40:43,667 | INFO     | --------------------------------------------------
[2025-06-04 11:40:59] 2025-06-04 15:40:43,668 | INFO     | PanDA job id: 6678287208
[2025-06-04 11:40:59] 2025-06-04 15:40:43,668 | INFO     | task id: 45006595
[2025-06-04 11:40:59] 2025-06-04 15:40:43,668 | INFO     | errors: (none)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:40:59] 2025-06-04 15:40:43,669 | INFO     | pilot state: finished 
[2025-06-04 11:40:59] 2025-06-04 15:40:43,669 | INFO     | transexitcode: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,669 | INFO     | exeerrorcode: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,669 | INFO     | exeerrordiag: 
[2025-06-04 11:40:59] 2025-06-04 15:40:43,669 | INFO     | exitcode: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,670 | INFO     | exitmsg: OK
[2025-06-04 11:40:59] 2025-06-04 15:40:43,670 | INFO     | cpuconsumptiontime: 34741 s
[2025-06-04 11:40:59] 2025-06-04 15:40:43,670 | INFO     | nevents: 400
[2025-06-04 11:40:59] 2025-06-04 15:40:43,670 | INFO     | neventsw: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,670 | INFO     | pid: 285853
[2025-06-04 11:40:59] 2025-06-04 15:40:43,671 | INFO     | pgrp: 285853
[2025-06-04 11:40:59] 2025-06-04 15:40:43,671 | INFO     | corecount: 9
[2025-06-04 11:40:59] 2025-06-04 15:40:43,671 | INFO     | event service: False
[2025-06-04 11:40:59] 2025-06-04 15:40:43,671 | INFO     | sizes: {0: 2397336, 10: 2397542, 11: 2397570, 5333: 2423913, 5336: 2432854, 5337: 2432910, 5357: 2433208}
[2025-06-04 11:40:59] 2025-06-04 15:40:43,672 | INFO     | --------------------------------------------------
[2025-06-04 11:40:59] 2025-06-04 15:40:43,672 | INFO     | 
[2025-06-04 11:40:59] 2025-06-04 15:40:43,672 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:40:59] 2025-06-04 15:40:43,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:40:59] 2025-06-04 15:40:43,720 | INFO     | job 6678287208 has completed (purged errors)
[2025-06-04 11:40:59] 2025-06-04 15:40:43,720 | INFO     | overall cleanup function is called
[2025-06-04 11:40:59] 2025-06-04 15:40:44,344 | INFO     | PID=279205 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:40:59] 2025-06-04 15:40:44,344 | INFO     | .. there are 10 such processes running
[2025-06-04 11:40:59] 2025-06-04 15:40:44,728 | INFO     | --- collectZombieJob: --- 10, [285853]
[2025-06-04 11:40:59] 2025-06-04 15:40:44,728 | INFO     | zombie collector waiting for pid 285853
[2025-06-04 11:40:59] 2025-06-04 15:40:44,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:40:59] 2025-06-04 15:40:44,729 | INFO     | collected zombie processes
[2025-06-04 11:40:59] 2025-06-04 15:40:44,729 | INFO     | will attempt to kill all subprocesses of pid=285853
[2025-06-04 11:40:59] 2025-06-04 15:40:44,956 | INFO     | process IDs to be killed: [285853] (in reverse order)
[2025-06-04 11:40:59] 2025-06-04 15:40:45,053 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:40:59] 2025-06-04 15:40:45,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:40:59] 2025-06-04 15:40:45,061 | INFO     | did not find any defunct processes belonging to 285853
[2025-06-04 11:40:59] 2025-06-04 15:40:45,067 | INFO     | did not find any defunct processes belonging to 285853
[2025-06-04 11:40:59] 2025-06-04 15:40:45,067 | INFO     | ready for new job
[2025-06-04 11:40:59] 2025-06-04 15:40:45,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:40:59] 2025-06-04 15:40:45,069 | INFO     | **************************************
[2025-06-04 11:40:59] 2025-06-04 15:40:45,069 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:40:59] 2025-06-04 15:40:45,069 | INFO     | **************************************
[2025-06-04 11:40:59] 2025-06-04 15:40:45,069 | INFO     | 
[2025-06-04 11:40:59] 2025-06-04 15:40:45,072 | INFO     | architecture information:
[2025-06-04 11:40:59] 2025-06-04 15:40:45,073 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:40:59] 2025-06-04 15:40:45,123 | INFO     | cat /etc/os-release:
[2025-06-04 11:40:59] NAME="CentOS Linux"
[2025-06-04 11:40:59] VERSION="7 (Core)"
[2025-06-04 11:40:59] ID="centos"
[2025-06-04 11:40:59] ID_LIKE="rhel fedora"
[2025-06-04 11:40:59] VERSION_ID="7"
[2025-06-04 11:40:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:40:59] ANSI_COLOR="0;31"
[2025-06-04 11:40:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:40:59] HOME_URL="https://www.centos.org/"
[2025-06-04 11:40:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:40:59] 
[2025-06-04 11:40:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:40:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:40:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:40:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:40:59] 
[2025-06-04 11:40:59] 2025-06-04 15:40:45,124 | INFO     | **************************************
[2025-06-04 11:40:59] 2025-06-04 15:40:45,345 | INFO     | 5381s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 11:40:59] 2025-06-04 15:40:45,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:40:59] 2025-06-04 15:40:45,646 | INFO     | sufficient remaining disk space (56488886272 B)
[2025-06-04 11:40:59] 2025-06-04 15:40:45,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:40:59] 2025-06-04 15:40:45,647 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:40:59] 2025-06-04 15:40:45,647 | INFO     | update_server=False
[2025-06-04 11:40:59] 2025-06-04 15:40:45,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:40:59] 2025-06-04 15:40:45,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:40:59] 2025-06-04 15:40:45,808 | INFO     | all job control threads have been joined
[2025-06-04 11:40:59] 2025-06-04 15:40:46,132 | INFO     | all data control threads have been joined
[2025-06-04 11:40:59] 2025-06-04 15:40:46,233 | INFO     | all payload control threads have been joined
[2025-06-04 11:40:59] 2025-06-04 15:40:46,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:40:59] 2025-06-04 15:40:46,284 | INFO     | aborting loop
[2025-06-04 11:40:59] 2025-06-04 15:40:46,350 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:40:59] 2025-06-04 15:40:46,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:40:59] 2025-06-04 15:40:46,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:40:59] 2025-06-04 15:40:46,651 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,759 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,813 | INFO     | [job] control thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,837 | INFO     | [job] validate thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,976 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:46,992 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,138 | INFO     | [data] control thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,238 | INFO     | [payload] control thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,289 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,413 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:40:59] 2025-06-04 15:40:47,582 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:47,653 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:48,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:40:59] 2025-06-04 15:40:49,493 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:51,441 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:40:59] 2025-06-04 15:40:52,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866107639616)>', '<ExcThread(monitor, started 139865509312256)>']
[2025-06-04 11:40:59] 2025-06-04 15:40:53,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:40:59] 2025-06-04 15:40:53,376 | INFO     | [monitor] control thread has ended
[2025-06-04 11:40:59] 2025-06-04 15:40:57,995 | INFO     | all workflow threads have been joined
[2025-06-04 11:40:59] 2025-06-04 15:40:57,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:40:59] 2025-06-04 15:40:57,995 | INFO     | traces error code: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:57,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:40:59] 2025-06-04 15:40:58,231 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:40:59] 2025-06-04 15:40:58,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:40:59] 2025-06-04 15:40:58,249 [wrapper] pilotpid: 279205
[2025-06-04 11:40:59] 2025-06-04 15:40:58,265 [wrapper] Pilot exit status: 0
[2025-06-04 11:40:59] 2025-06-04 15:40:58,334 [wrapper] pandaids: 6678287208
[2025-06-04 11:40:59] 2025-06-04 15:40:58,410 [wrapper] cleanup supervisor_pilot 119775 279206
[2025-06-04 11:40:59] 2025-06-04 15:40:58,429 [wrapper] Test setup, not cleaning
[2025-06-04 11:40:59] 2025-06-04 15:40:58,441 [wrapper] apfmon messages muted
[2025-06-04 11:40:59] 2025-06-04 15:40:58,501 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:40:59] 2025-06-04 15:40:58,550 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:40:59]  *** Error codes and diagnostics ***
[2025-06-04 11:40:59]     "exeErrorCode": 0,
[2025-06-04 11:40:59]     "exeErrorDiag": "",
[2025-06-04 11:40:59]     "pilotErrorCode": 0,
[2025-06-04 11:40:59]     "pilotErrorDiag": "",
[2025-06-04 11:40:59]  *** Listing of results directory ***
[2025-06-04 11:40:59] total 384820
[2025-06-04 11:40:59] -rwx------ 1 boincer umatlas     37140 Jun  4 00:04 runpilot2-wrapper.sh
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:04 queuedata.json
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:40:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:10 run_atlas
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:10 job.xml
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas 215764720 Jun  4 10:10 EVNT.45006593._002078.pool.root.1
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:10 start_atlas.sh
[2025-06-04 11:40:59] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:10 shared
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas    508870 Jun  4 10:10 input.tar.gz
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:10 boinc_lockfile
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas      2522 Jun  4 10:10 pandaJob.out
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas    986819 Jun  4 10:11 agis_schedconf.cvmfs.json
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas   1598969 Jun  4 10:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:40:59] drwx------ 4 boincer umatlas      4096 Jun  4 10:11 pilot3
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 11:38 init_data.xml
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas 172798675 Jun  4 11:39 HITS.45006595._051855.pool.root.1
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:39 boinc_task_state.xml
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas      1057 Jun  4 11:40 memory_monitor_summary.json
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas    310676 Jun  4 11:40 log.45006595._051855.job.log.tgz.1
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas        95 Jun  4 11:40 pilot_heartbeat.json
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas      7747 Jun  4 11:40 heartbeat.json
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas      4468 Jun  4 11:40 pilotlog.txt
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:40 boinc_mmap_file
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas    521243 Jun  4 11:40 log.45006595._051855.job.log.1
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas       357 Jun  4 11:40 output.list
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:40 wrapper_checkpoint.txt
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:40 runtime_log
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas    849920 Jun  4 11:40 result.tar.gz
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 11:40 runtime_log.err
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas       659 Jun  4 11:40 0fNMDmcXug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr5mKDmTnzUbm.diag
[2025-06-04 11:40:59] -rw-r--r-- 1 boincer umatlas     22361 Jun  4 11:40 stderr.txt
[2025-06-04 11:40:59] HITS file was successfully produced:
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas 172798675 Jun  4 11:39 shared/HITS.pool.root.1
[2025-06-04 11:40:59]  *** Contents of shared directory: ***
[2025-06-04 11:40:59] total 380812
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas 215764720 Jun  4 10:10 ATLAS.root_0
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:10 start_atlas.sh
[2025-06-04 11:40:59] -rw-r--r-- 2 boincer umatlas    508870 Jun  4 10:10 input.tar.gz
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas 172798675 Jun  4 11:39 HITS.pool.root.1
[2025-06-04 11:40:59] -rw------- 1 boincer umatlas    849920 Jun  4 11:40 result.tar.gz
11:41:01 (275554): run_atlas exited; CPU time 34806.679035
11:41:01 (275554): called boinc_finish(0)

</stderr_txt>
]]>

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