Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:25 (3050954): wrapper (7.7.26015): starting
11:57:25 (3050954): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:57:25] Arguments: --nthreads 8
[2025-06-04 11:57:25] Threads: 8
[2025-06-04 11:57:25] Checking for CVMFS
[2025-06-04 11:57:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:57:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:57:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:57:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:57:25] 2.12.6.0 3036893 23510 525112 146786 0 141 21480978 32935937 9324 16776704 0 124273100 99.678 97749682 24644 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:57:25] CVMFS is ok
[2025-06-04 11:57:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:57:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:57:25] Further information can be found at the LHC@home message board.
[2025-06-04 11:57:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:57:25] Checking for apptainer binary...
[2025-06-04 11:57:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:57:25] Running /usr/bin/apptainer --version
[2025-06-04 11:57:25] apptainer version 1.4.1-1.el9
[2025-06-04 11:57:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:57:25] c6-12-29-4.aglt2.org
[2025-06-04 11:57:25] apptainer works
[2025-06-04 11:57:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:57:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:57:25] Starting ATLAS job with PandaID=6666806908
[2025-06-04 11:57:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:12:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:12:28]  filetype=log
[2025-06-04 13:12:28]  guid=1c4bc9d2-a60d-420e-bb2f-3d120d410ba3
[2025-06-04 13:12:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:12:28]  is_altstaged=None
[2025-06-04 13:12:28]  is_tar=False
[2025-06-04 13:12:28]  lfn=log.44871837._063658.job.log.tgz.1
[2025-06-04 13:12:28]  mtime=0
[2025-06-04 13:12:28]  protocol_id=None
[2025-06-04 13:12:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:12:28]  replicas=None
[2025-06-04 13:12:28]  scope=mc23_13p6TeV
[2025-06-04 13:12:28]  status=None
[2025-06-04 13:12:28]  status_code=0
[2025-06-04 13:12:28]  storage_token=
[2025-06-04 13:12:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666806908/log.44871837._063658.job.log.tgz.1
[2025-06-04 13:12:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/44/log.44871837._063658.job.log.tgz.1
[2025-06-04 13:12:28]  workdir=None
[2025-06-04 13:12:28] ]
[2025-06-04 13:12:28] 2025-06-04 17:12:11,308 | INFO     | transferring file log.44871837._063658.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666806908/log.44871837._063658.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:12:28] 2025-06-04 17:12:11,308 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666806908/log.44871837._063658.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._063658.job
[2025-06-04 13:12:28] 2025-06-04 17:12:11,320 | INFO     | adding to output.list: log.44871837._063658.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/44/log.44871837._063658.job.log.tg
[2025-06-04 13:12:28] 2025-06-04 17:12:11,321 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:12:28] 2025-06-04 17:12:11,321 | INFO     | summary of transferred files:
[2025-06-04 13:12:28] 2025-06-04 17:12:11,321 | INFO     |  -- lfn=log.44871837._063658.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:12:28] 2025-06-04 17:12:11,321 | INFO     | stage-out finished correctly
[2025-06-04 13:12:28] 2025-06-04 17:12:11,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:12:28] 2025-06-04 17:12:11,547 | WARNING  | process 3062164 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:12:28] 2025-06-04 17:12:11,547 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666806908/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:12:28] 2025-06-04 17:12:11,722 | INFO     | number of running child processes to parent process 3062164: 1
[2025-06-04 13:12:28] 2025-06-04 17:12:11,722 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:12:28] 2025-06-04 17:12:12,664 | INFO     | job 6666806908 has state=finished
[2025-06-04 13:12:28] 2025-06-04 17:12:12,664 | INFO     | preparing for final server update for job 6666806908 in state='finished'
[2025-06-04 13:12:28] 2025-06-04 17:12:12,664 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:12:28] 2025-06-04 17:12:12,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:12:28] 2025-06-04 17:12:12,664 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:12:28] 2025-06-04 17:12:12,665 | INFO     | job 6666806908 has finished - writing final server update
[2025-06-04 13:12:28] 2025-06-04 17:12:12,665 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:12:28] 2025-06-04 17:12:12,681 | INFO     | executing command: lscpu
[2025-06-04 13:12:28] 2025-06-04 17:12:12,746 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:12:28] 2025-06-04 17:12:14,225 | INFO     | monitor loop #332: job 0:6666806908 is in state 'finished'
[2025-06-04 13:12:28] 2025-06-04 17:12:14,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,048 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:12:28] 2025-06-04 17:12:15,048 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666806908/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,049 | INFO     | extracted standard info from prmon json
[2025-06-04 13:12:28] 2025-06-04 17:12:15,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:12:28] 2025-06-04 17:12:15,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:12:28] 2025-06-04 17:12:15,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:12:28] 2025-06-04 17:12:15,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:12:28] 2025-06-04 17:12:15,051 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | sum of deviations: -4844430900.000001
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | mean x: 1749054990.0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | mean y: 2248577.2985074627
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | -- intersect: 90876355230.40822
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | intersect: 90876355230.40822
[2025-06-04 13:12:28] 2025-06-04 17:12:15,052 | INFO     | chi2: 0.18381976480750692
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | -- intersect: 90876355230.40822
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | current memory leak: -51.96 B/s (using 67 data points, chi2=0.18)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | ..............................
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . Timing measurements:
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . get job = 0 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . initial setup = 2 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . payload setup = 3 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . stage-in = 0 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . payload execution = 4457 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . stage-out = 0 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,053 | INFO     | . log creation = 0 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,054 | INFO     | ..............................
[2025-06-04 13:12:28] 2025-06-04 17:12:15,141 | INFO     | 
[2025-06-04 13:12:28] 2025-06-04 17:12:15,141 | INFO     | job summary report
[2025-06-04 13:12:28] 2025-06-04 17:12:15,141 | INFO     | --------------------------------------------------
[2025-06-04 13:12:28] 2025-06-04 17:12:15,141 | INFO     | PanDA job id: 6666806908
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | task id: 44871837
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | errors: (none)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | pilot state: finished 
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | transexitcode: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | exeerrorcode: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | exeerrordiag: 
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | exitcode: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | exitmsg: OK
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | cpuconsumptiontime: 33567 s
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | nevents: 400
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | neventsw: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | pid: 3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | pgrp: 3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | corecount: 8
[2025-06-04 13:12:28] 2025-06-04 17:12:15,142 | INFO     | event service: False
[2025-06-04 13:12:28] 2025-06-04 17:12:15,143 | INFO     | sizes: {0: 2397392, 2: 2397598, 11: 2397626, 4464: 2423663, 4466: 2432660, 4469: 2432774}
[2025-06-04 13:12:28] 2025-06-04 17:12:15,143 | INFO     | --------------------------------------------------
[2025-06-04 13:12:28] 2025-06-04 17:12:15,143 | INFO     | 
[2025-06-04 13:12:28] 2025-06-04 17:12:15,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:12:28] 2025-06-04 17:12:15,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:12:28] 2025-06-04 17:12:15,158 | INFO     | job 6666806908 has completed (purged errors)
[2025-06-04 13:12:28] 2025-06-04 17:12:15,158 | INFO     | overall cleanup function is called
[2025-06-04 13:12:28] 2025-06-04 17:12:16,165 | INFO     | --- collectZombieJob: --- 10, [3062164]
[2025-06-04 13:12:28] 2025-06-04 17:12:16,166 | INFO     | zombie collector waiting for pid 3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:16,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:12:28] 2025-06-04 17:12:16,166 | INFO     | collected zombie processes
[2025-06-04 13:12:28] 2025-06-04 17:12:16,166 | INFO     | will attempt to kill all subprocesses of pid=3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:16,376 | INFO     | process IDs to be killed: [3062164] (in reverse order)
[2025-06-04 13:12:28] 2025-06-04 17:12:16,435 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:12:28] 2025-06-04 17:12:16,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:12:28] 2025-06-04 17:12:16,447 | INFO     | did not find any defunct processes belonging to 3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:16,459 | INFO     | did not find any defunct processes belonging to 3062164
[2025-06-04 13:12:28] 2025-06-04 17:12:16,459 | INFO     | ready for new job
[2025-06-04 13:12:28] 2025-06-04 17:12:16,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:12:28] 2025-06-04 17:12:16,460 | INFO     | **************************************
[2025-06-04 13:12:28] 2025-06-04 17:12:16,461 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:12:28] 2025-06-04 17:12:16,461 | INFO     | **************************************
[2025-06-04 13:12:28] 2025-06-04 17:12:16,461 | INFO     | 
[2025-06-04 13:12:28] 2025-06-04 17:12:16,477 | INFO     | architecture information:
[2025-06-04 13:12:28] 2025-06-04 17:12:16,478 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:12:28] 2025-06-04 17:12:16,489 | INFO     | cat /etc/os-release:
[2025-06-04 13:12:28] NAME="CentOS Linux"
[2025-06-04 13:12:28] VERSION="7 (Core)"
[2025-06-04 13:12:28] ID="centos"
[2025-06-04 13:12:28] ID_LIKE="rhel fedora"
[2025-06-04 13:12:28] VERSION_ID="7"
[2025-06-04 13:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:12:28] ANSI_COLOR="0;31"
[2025-06-04 13:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:12:28] HOME_URL="https://www.centos.org/"
[2025-06-04 13:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:12:28] 
[2025-06-04 13:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:12:28] 
[2025-06-04 13:12:28] 2025-06-04 17:12:16,490 | INFO     | **************************************
[2025-06-04 13:12:28] 2025-06-04 17:12:16,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:12:28] 2025-06-04 17:12:17,003 | INFO     | sufficient remaining disk space (95278858240 B)
[2025-06-04 13:12:28] 2025-06-04 17:12:17,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:12:28] 2025-06-04 17:12:17,003 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:12:28] 2025-06-04 17:12:17,003 | INFO     | update_server=False
[2025-06-04 13:12:28] 2025-06-04 17:12:17,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:12:28] 2025-06-04 17:12:17,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:12:28] 2025-06-04 17:12:17,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:12:28] 2025-06-04 17:12:17,058 | INFO     | all data control threads have been joined
[2025-06-04 13:12:28] 2025-06-04 17:12:17,065 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:12:28] 2025-06-04 17:12:17,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:12:28] 2025-06-04 17:12:17,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:12:28] 2025-06-04 17:12:17,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:12:28] 2025-06-04 17:12:17,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:12:28] 2025-06-04 17:12:17,734 | INFO     | aborting loop
[2025-06-04 13:12:28] 2025-06-04 17:12:17,791 | INFO     | all payload control threads have been joined
[2025-06-04 13:12:28] 2025-06-04 17:12:17,872 | INFO     | all job control threads have been joined
[2025-06-04 13:12:28] 2025-06-04 17:12:18,009 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,010 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,064 | INFO     | [data] control thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,153 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,349 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,550 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,691 | INFO     | [job] validate thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,739 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,797 | INFO     | [payload] control thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,876 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:18,877 | INFO     | [job] control thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:19,010 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:19,050 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:19,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:19,137 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:21,478 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:12:28] 2025-06-04 17:12:22,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140653278402368)>', '<ExcThread(monitor, started 140652780181248)>']
[2025-06-04 13:12:28] 2025-06-04 17:12:23,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:12:28] 2025-06-04 17:12:23,096 | INFO     | [monitor] control thread has ended
[2025-06-04 13:12:28] 2025-06-04 17:12:27,884 | INFO     | all workflow threads have been joined
[2025-06-04 13:12:28] 2025-06-04 17:12:27,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:12:28] 2025-06-04 17:12:27,885 | INFO     | traces error code: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:27,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:12:28] 2025-06-04 17:12:28,075 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:12:28] 2025-06-04 17:12:28,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:12:28] 2025-06-04 17:12:28,079 [wrapper] pilotpid: 3055026
[2025-06-04 13:12:28] 2025-06-04 17:12:28,081 [wrapper] Pilot exit status: 0
[2025-06-04 13:12:28] 2025-06-04 17:12:28,090 [wrapper] pandaids: 6666806908
[2025-06-04 13:12:28] 2025-06-04 17:12:28,151 [wrapper] cleanup supervisor_pilot 3222568 3055027
[2025-06-04 13:12:28] 2025-06-04 17:12:28,154 [wrapper] Test setup, not cleaning
[2025-06-04 13:12:28] 2025-06-04 17:12:28,156 [wrapper] apfmon messages muted
[2025-06-04 13:12:28] 2025-06-04 17:12:28,159 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:12:28] 2025-06-04 17:12:28,161 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:12:28]  *** Error codes and diagnostics ***
[2025-06-04 13:12:28]     "exeErrorCode": 0,
[2025-06-04 13:12:28]     "exeErrorDiag": "",
[2025-06-04 13:12:28]     "pilotErrorCode": 0,
[2025-06-04 13:12:28]     "pilotErrorDiag": "",
[2025-06-04 13:12:28]  *** Listing of results directory ***
[2025-06-04 13:12:28] total 419248
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-06-04 13:12:28] -rwx------. 1 boincer umatlas     37140 May 27 02:48 runpilot2-wrapper.sh
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas      5111 May 27 02:48 queuedata.json
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:12:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:57 run_atlas
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:57 job.xml
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas 225652348 Jun  4 11:57 EVNT.44871834._002510.pool.root.1
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:57 start_atlas.sh
[2025-06-04 13:12:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:57 shared
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas    517091 Jun  4 11:57 input.tar.gz
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:57 boinc_lockfile
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:57 pandaJob.out
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas    990989 Jun  4 11:57 agis_schedconf.cvmfs.json
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:12:28] drwx------. 4 boincer umatlas      4096 Jun  4 11:57 pilot3
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 13:01 init_data.xml
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas 198300506 Jun  4 13:11 HITS.44871837._063658.pool.root.1
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:11 boinc_task_state.xml
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas      1033 Jun  4 13:12 memory_monitor_summary.json
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas        95 Jun  4 13:12 pilot_heartbeat.json
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas    314235 Jun  4 13:12 log.44871837._063658.job.log.tgz.1
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas      7715 Jun  4 13:12 heartbeat.json
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:12 boinc_mmap_file
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:12 wrapper_checkpoint.txt
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas      4353 Jun  4 13:12 pilotlog.txt
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas    440641 Jun  4 13:12 log.44871837._063658.job.log.1
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas       357 Jun  4 13:12 output.list
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:12 runtime_log
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas    778240 Jun  4 13:12 result.tar.gz
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 13:12 runtime_log.err
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas       654 Jun  4 13:12 JWNODm7H3d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsmYKDm24yjMn.diag
[2025-06-04 13:12:28] -rw-r--r--. 1 boincer umatlas     21220 Jun  4 13:12 stderr.txt
[2025-06-04 13:12:28] HITS file was successfully produced:
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas 198300506 Jun  4 13:11 shared/HITS.pool.root.1
[2025-06-04 13:12:28]  *** Contents of shared directory: ***
[2025-06-04 13:12:28] total 415308
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas 225652348 Jun  4 11:57 ATLAS.root_0
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:57 start_atlas.sh
[2025-06-04 13:12:28] -rw-r--r--. 2 boincer umatlas    517091 Jun  4 11:57 input.tar.gz
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas 198300506 Jun  4 13:11 HITS.pool.root.1
[2025-06-04 13:12:28] -rw-------. 1 boincer umatlas    778240 Jun  4 13:12 result.tar.gz
13:12:29 (3050954): run_atlas exited; CPU time 33711.579156
13:12:29 (3050954): called boinc_finish(0)

</stderr_txt>
]]>

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