Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:48 (247761): wrapper (7.7.26015): starting
10:00:48 (247761): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:00:48] Arguments: --nthreads 8
[2025-06-04 10:00:48] Threads: 8
[2025-06-04 10:00:48] Checking for CVMFS
[2025-06-04 10:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:00:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:00:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:00:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:00:50] 2.12.6.0 3074763 23624 347080 146781 2 388 18248891 32935936 16053 16776704 0 61002479 99.627 62897181 10384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:00:50] CVMFS is ok
[2025-06-04 10:00:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:00:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:00:50] Further information can be found at the LHC@home message board.
[2025-06-04 10:00:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:00:50] Checking for apptainer binary...
[2025-06-04 10:00:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:00:50] Running /usr/bin/apptainer --version
[2025-06-04 10:00:50] apptainer version 1.4.1-1.el9
[2025-06-04 10:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:00:50] c6-12-25-1.aglt2.org
[2025-06-04 10:00:50] apptainer works
[2025-06-04 10:00:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:00:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:00:50] Starting ATLAS job with PandaID=6678797824
[2025-06-04 10:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:38:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:38:45] 2025-06-04 17:38:28,996 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:38:45] 2025-06-04 17:38:28,996 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678797824/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:38:45] 2025-06-04 17:38:28,999 | INFO     | extracted standard info from prmon json
[2025-06-04 13:38:45] 2025-06-04 17:38:29,000 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:38:45] 2025-06-04 17:38:29,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:38:45] 2025-06-04 17:38:29,001 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:38:45] 2025-06-04 17:38:29,001 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:38:45] 2025-06-04 17:38:29,012 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:38:45] 2025-06-04 17:38:29,014 | INFO     | sum of square deviations: 2996437975.9812303
[2025-06-04 13:38:45] 2025-06-04 17:38:29,017 | INFO     | sum of deviations: 71449372684.9577
[2025-06-04 13:38:45] 2025-06-04 17:38:29,018 | INFO     | mean x: 1749052189.0093896
[2025-06-04 13:38:45] 2025-06-04 17:38:29,018 | INFO     | mean y: 2108738.5211267606
[2025-06-04 13:38:45] 2025-06-04 17:38:29,018 | INFO     | -- intersect: -41703637450.68542
[2025-06-04 13:38:45] 2025-06-04 17:38:29,019 | INFO     | intersect: -41703637450.68542
[2025-06-04 13:38:45] 2025-06-04 17:38:29,019 | INFO     | chi2: 4.58730532733594
[2025-06-04 13:38:45] 2025-06-04 17:38:29,021 | INFO     | sum of square deviations: 2790332395.9807787
[2025-06-04 13:38:45] 2025-06-04 17:38:29,024 | INFO     | sum of deviations: 81509756521.3077
[2025-06-04 13:38:45] 2025-06-04 17:38:29,024 | INFO     | mean x: 1749052036.5096154
[2025-06-04 13:38:45] 2025-06-04 17:38:29,025 | INFO     | mean y: 2116022.346153846
[2025-06-04 13:38:45] 2025-06-04 17:38:29,025 | INFO     | -- intersect: -51090293557.36838
[2025-06-04 13:38:45] 2025-06-04 17:38:29,025 | INFO     | intersect: -51090293557.36838
[2025-06-04 13:38:45] 2025-06-04 17:38:29,026 | INFO     | chi2: 3.939174580350646
[2025-06-04 13:38:45] 2025-06-04 17:38:29,026 | INFO     | current chi2=3.939174580350646 (change=14.128790231665123 %)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,026 | INFO     | right removable region: 207
[2025-06-04 13:38:45] 2025-06-04 17:38:29,027 | INFO     | sum of square deviations: 2790331175.9807787
[2025-06-04 13:38:45] 2025-06-04 17:38:29,031 | INFO     | sum of deviations: 27098122154.31731
[2025-06-04 13:38:45] 2025-06-04 17:38:29,031 | INFO     | mean x: 1749052341.5096154
[2025-06-04 13:38:45] 2025-06-04 17:38:29,032 | INFO     | mean y: 2141444.591346154
[2025-06-04 13:38:45] 2025-06-04 17:38:29,032 | INFO     | -- intersect: -16983668129.737389
[2025-06-04 13:38:45] 2025-06-04 17:38:29,032 | INFO     | intersect: -16983668129.737389
[2025-06-04 13:38:45] 2025-06-04 17:38:29,033 | INFO     | chi2: 2.1797370684484823
[2025-06-04 13:38:45] 2025-06-04 17:38:29,033 | INFO     | current chi2=2.1797370684484823 (change=52.48327911684143 %)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,034 | INFO     | sum of square deviations: 2593898975.9802933
[2025-06-04 13:38:45] 2025-06-04 17:38:29,038 | INFO     | sum of deviations: 71309212.19704628
[2025-06-04 13:38:45] 2025-06-04 17:38:29,038 | INFO     | mean x: 1749052494.0098522
[2025-06-04 13:38:45] 2025-06-04 17:38:29,038 | INFO     | mean y: 2162420.9014778323
[2025-06-04 13:38:45] 2025-06-04 17:38:29,038 | INFO     | -- intersect: -45921007.402427375
[2025-06-04 13:38:45] 2025-06-04 17:38:29,039 | INFO     | intersect: -45921007.402427375
[2025-06-04 13:38:45] 2025-06-04 17:38:29,039 | INFO     | chi2: 1.3638955728272073
[2025-06-04 13:38:45] 2025-06-04 17:38:29,040 | INFO     | current chi2=1.3638955728272073 (change=37.42843609123846 %)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,041 | INFO     | sum of square deviations: 2406908813.4797983
[2025-06-04 13:38:45] 2025-06-04 17:38:29,044 | INFO     | sum of deviations: -15087225870.914139
[2025-06-04 13:38:45] 2025-06-04 17:38:29,044 | INFO     | mean x: 1749052646.510101
[2025-06-04 13:38:45] 2025-06-04 17:38:29,044 | INFO     | mean y: 2174762.207070707
[2025-06-04 13:38:45] 2025-06-04 17:38:29,045 | INFO     | -- intersect: 10965760997.892904
[2025-06-04 13:38:45] 2025-06-04 17:38:29,045 | INFO     | intersect: 10965760997.892904
[2025-06-04 13:38:45] 2025-06-04 17:38:29,046 | INFO     | chi2: 1.0751264302604837
[2025-06-04 13:38:45] 2025-06-04 17:38:29,046 | INFO     | current chi2=1.0751264302604837 (change=21.1723791996873 %)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,046 | INFO     | left removable region: 30
[2025-06-04 13:38:45] 2025-06-04 17:38:29,047 | INFO     | sum of square deviations: 1719421762.9943547
[2025-06-04 13:38:45] 2025-06-04 17:38:29,050 | INFO     | sum of deviations: 11328001681.423727
[2025-06-04 13:38:45] 2025-06-04 17:38:29,050 | INFO     | mean x: 1749052921.0056498
[2025-06-04 13:38:45] 2025-06-04 17:38:29,050 | INFO     | mean y: 2169279.5762711866
[2025-06-04 13:38:45] 2025-06-04 17:38:29,051 | INFO     | -- intersect: -11521050244.84482
[2025-06-04 13:38:45] 2025-06-04 17:38:29,051 | INFO     | intersect: -11521050244.84482
[2025-06-04 13:38:45] 2025-06-04 17:38:29,052 | INFO     | chi2: 0.17788435131758806
[2025-06-04 13:38:45] 2025-06-04 17:38:29,052 | INFO     | -- intersect: -11521050244.84482
[2025-06-04 13:38:45] 2025-06-04 17:38:29,052 | INFO     | current memory leak: 6.59 B/s (using 177 data points, chi2=0.18)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,054 | INFO     | ..............................
[2025-06-04 13:38:45] 2025-06-04 17:38:29,054 | INFO     | . Timing measurements:
[2025-06-04 13:38:45] 2025-06-04 17:38:29,054 | INFO     | . get job = 0 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,054 | INFO     | . initial setup = 4 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,054 | INFO     | . payload setup = 16 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,055 | INFO     | . stage-in = 0 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,055 | INFO     | . payload execution = 12977 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,055 | INFO     | . stage-out = 4 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,055 | INFO     | . log creation = 0 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,055 | INFO     | ..............................
[2025-06-04 13:38:45] 2025-06-04 17:38:29,369 | INFO     | 
[2025-06-04 13:38:45] 2025-06-04 17:38:29,370 | INFO     | job summary report
[2025-06-04 13:38:45] 2025-06-04 17:38:29,370 | INFO     | --------------------------------------------------
[2025-06-04 13:38:45] 2025-06-04 17:38:29,371 | INFO     | PanDA job id: 6678797824
[2025-06-04 13:38:45] 2025-06-04 17:38:29,371 | INFO     | task id: 45006595
[2025-06-04 13:38:45] 2025-06-04 17:38:29,371 | INFO     | errors: (none)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:38:45] 2025-06-04 17:38:29,372 | INFO     | pilot state: finished 
[2025-06-04 13:38:45] 2025-06-04 17:38:29,372 | INFO     | transexitcode: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:29,372 | INFO     | exeerrorcode: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:29,372 | INFO     | exeerrordiag: 
[2025-06-04 13:38:45] 2025-06-04 17:38:29,372 | INFO     | exitcode: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:29,373 | INFO     | exitmsg: OK
[2025-06-04 13:38:45] 2025-06-04 17:38:29,373 | INFO     | cpuconsumptiontime: 92150 s
[2025-06-04 13:38:45] 2025-06-04 17:38:29,373 | INFO     | nevents: 400
[2025-06-04 13:38:45] 2025-06-04 17:38:29,373 | INFO     | neventsw: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:29,373 | INFO     | pid: 258357
[2025-06-04 13:38:45] 2025-06-04 17:38:29,374 | INFO     | pgrp: 258357
[2025-06-04 13:38:45] 2025-06-04 17:38:29,374 | INFO     | corecount: 8
[2025-06-04 13:38:45] 2025-06-04 17:38:29,374 | INFO     | event service: False
[2025-06-04 13:38:45] 2025-06-04 17:38:29,374 | INFO     | sizes: {0: 2396458, 1: 2397143, 2: 2397342, 12: 2397548, 13: 2397576, 12997: 2427690, 12998: 2427817, 13003: 2436814, 13004: 2436870, 13013: 2437040}
[2025-06-04 13:38:45] 2025-06-04 17:38:29,374 | INFO     | --------------------------------------------------
[2025-06-04 13:38:45] 2025-06-04 17:38:29,375 | INFO     | 
[2025-06-04 13:38:45] 2025-06-04 17:38:29,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 13:38:45] 2025-06-04 17:38:29,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,420 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:38:45] 2025-06-04 17:38:29,420 | INFO     | job 6678797824 has completed (purged errors)
[2025-06-04 13:38:45] 2025-06-04 17:38:29,420 | INFO     | overall cleanup function is called
[2025-06-04 13:38:45] 2025-06-04 17:38:30,431 | INFO     | --- collectZombieJob: --- 10, [258357]
[2025-06-04 13:38:45] 2025-06-04 17:38:30,432 | INFO     | zombie collector waiting for pid 258357
[2025-06-04 13:38:45] 2025-06-04 17:38:30,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:38:45] 2025-06-04 17:38:30,433 | INFO     | collected zombie processes
[2025-06-04 13:38:45] 2025-06-04 17:38:30,433 | INFO     | will attempt to kill all subprocesses of pid=258357
[2025-06-04 13:38:45] 2025-06-04 17:38:31,331 | INFO     | process IDs to be killed: [258357] (in reverse order)
[2025-06-04 13:38:45] 2025-06-04 17:38:31,568 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:38:45] 2025-06-04 17:38:31,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:38:45] 2025-06-04 17:38:31,600 | INFO     | did not find any defunct processes belonging to 258357
[2025-06-04 13:38:45] 2025-06-04 17:38:31,630 | INFO     | did not find any defunct processes belonging to 258357
[2025-06-04 13:38:45] 2025-06-04 17:38:31,630 | INFO     | ready for new job
[2025-06-04 13:38:45] 2025-06-04 17:38:31,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:38:45] 2025-06-04 17:38:31,634 | INFO     | **************************************
[2025-06-04 13:38:45] 2025-06-04 17:38:31,635 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:38:45] 2025-06-04 17:38:31,635 | INFO     | **************************************
[2025-06-04 13:38:45] 2025-06-04 17:38:31,635 | INFO     | 
[2025-06-04 13:38:45] 2025-06-04 17:38:31,663 | INFO     | architecture information:
[2025-06-04 13:38:45] 2025-06-04 17:38:31,664 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:38:45] 2025-06-04 17:38:31,695 | INFO     | cat /etc/os-release:
[2025-06-04 13:38:45] NAME="CentOS Linux"
[2025-06-04 13:38:45] VERSION="7 (Core)"
[2025-06-04 13:38:45] ID="centos"
[2025-06-04 13:38:45] ID_LIKE="rhel fedora"
[2025-06-04 13:38:45] VERSION_ID="7"
[2025-06-04 13:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:38:45] ANSI_COLOR="0;31"
[2025-06-04 13:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:38:45] HOME_URL="https://www.centos.org/"
[2025-06-04 13:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:38:45] 
[2025-06-04 13:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:38:45] 
[2025-06-04 13:38:45] 2025-06-04 17:38:31,695 | INFO     | **************************************
[2025-06-04 13:38:45] 2025-06-04 17:38:32,199 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 13:38:45] 2025-06-04 17:38:32,235 | INFO     | sufficient remaining disk space (76584845312 B)
[2025-06-04 13:38:45] 2025-06-04 17:38:32,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:38:45] 2025-06-04 17:38:32,236 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:38:45] 2025-06-04 17:38:32,237 | INFO     | update_server=False
[2025-06-04 13:38:45] 2025-06-04 17:38:32,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:38:45] 2025-06-04 17:38:32,262 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:38:45] 2025-06-04 17:38:32,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:38:45] 2025-06-04 17:38:32,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:38:45] 2025-06-04 17:38:32,424 | INFO     | all job control threads have been joined
[2025-06-04 13:38:45] 2025-06-04 17:38:32,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:38:45] 2025-06-04 17:38:32,439 | INFO     | aborting loop
[2025-06-04 13:38:45] 2025-06-04 17:38:32,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:38:45] 2025-06-04 17:38:33,243 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,341 | INFO     | all data control threads have been joined
[2025-06-04 13:38:45] 2025-06-04 17:38:33,394 | INFO     | [job] validate thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,396 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,397 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,411 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,431 | INFO     | [job] control thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,445 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:33,642 | INFO     | all payload control threads have been joined
[2025-06-04 13:38:45] 2025-06-04 17:38:33,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,076 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:38:45] 2025-06-04 17:38:34,347 | INFO     | [data] control thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,394 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,403 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,520 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:34,648 | INFO     | [payload] control thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:35,330 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:35,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:38:45] 2025-06-04 17:38:39,407 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:38:45] 2025-06-04 17:38:40,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782811821888)>', '<ExcThread(monitor, started 139782042670848)>']
[2025-06-04 13:38:45] 2025-06-04 17:38:41,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:38:45] 2025-06-04 17:38:41,309 | INFO     | [monitor] control thread has ended
[2025-06-04 13:38:45] 2025-06-04 17:38:45,327 | INFO     | all workflow threads have been joined
[2025-06-04 13:38:45] 2025-06-04 17:38:45,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:38:45] 2025-06-04 17:38:45,329 | INFO     | traces error code: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:45,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:38:45] 2025-06-04 17:38:45,606 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:38:45] 2025-06-04 17:38:45,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:38:45] 2025-06-04 17:38:45,617 [wrapper] pilotpid: 251627
[2025-06-04 13:38:45] 2025-06-04 17:38:45,622 [wrapper] Pilot exit status: 0
[2025-06-04 13:38:45] 2025-06-04 17:38:45,644 [wrapper] pandaids: 6678797824
[2025-06-04 13:38:45] 2025-06-04 17:38:45,813 [wrapper] cleanup supervisor_pilot  790262 251628
[2025-06-04 13:38:45] 2025-06-04 17:38:45,819 [wrapper] Test setup, not cleaning
[2025-06-04 13:38:45] 2025-06-04 17:38:45,824 [wrapper] apfmon messages muted
[2025-06-04 13:38:45] 2025-06-04 17:38:45,829 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:38:45] 2025-06-04 17:38:45,834 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:38:45]  *** Error codes and diagnostics ***
[2025-06-04 13:38:45]     "exeErrorCode": 0,
[2025-06-04 13:38:45]     "exeErrorDiag": "",
[2025-06-04 13:38:45]     "pilotErrorCode": 0,
[2025-06-04 13:38:45]     "pilotErrorDiag": "",
[2025-06-04 13:38:45]  *** Listing of results directory ***
[2025-06-04 13:38:45] total 392616
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 13:38:45] -rwx------. 1 boincer umatlas     37140 Jun  4 04:03 runpilot2-wrapper.sh
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:03 queuedata.json
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:00 run_atlas
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:00 job.xml
[2025-06-04 13:38:45] -rw-r--r--. 2 boincer umatlas 216620477 Jun  4 10:00 EVNT.45006593._000120.pool.root.1
[2025-06-04 13:38:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:00 shared
[2025-06-04 13:38:45] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 10:00 input.tar.gz
[2025-06-04 13:38:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:00 boinc_lockfile
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 10:00 pandaJob.out
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas    986819 Jun  4 10:01 agis_schedconf.cvmfs.json
[2025-06-04 13:38:45] drwx------. 4 boincer umatlas      4096 Jun  4 10:01 pilot3
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 13:36 init_data.xml
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas 178540079 Jun  4 13:36 HITS.45006595._055604.pool.root.1
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas       531 Jun  4 13:37 boinc_task_state.xml
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas        95 Jun  4 13:38 pilot_heartbeat.json
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas      1040 Jun  4 13:38 memory_monitor_summary.json
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas    387008 Jun  4 13:38 log.45006595._055604.job.log.tgz.1
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:38 boinc_mmap_file
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas        28 Jun  4 13:38 wrapper_checkpoint.txt
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas      7723 Jun  4 13:38 heartbeat.json
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas      4353 Jun  4 13:38 pilotlog.txt
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas   1138536 Jun  4 13:38 log.45006595._055604.job.log.1
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas       357 Jun  4 13:38 output.list
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:38 runtime_log
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas   1546240 Jun  4 13:38 result.tar.gz
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas      8670 Jun  4 13:38 runtime_log.err
[2025-06-04 13:38:45] -rw-------. 1 boincer umatlas       659 Jun  4 13:38 PlJMDmKHyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4lnKDmoO60jn.diag
[2025-06-04 13:38:45] -rw-r--r--. 1 boincer umatlas     20922 Jun  4 13:38 stderr.txt
[2025-06-04 13:38:46] HITS file was successfully produced:
[2025-06-04 13:38:46] -rw-------. 1 boincer umatlas 178540079 Jun  4 13:36 shared/HITS.pool.root.1
[2025-06-04 13:38:46]  *** Contents of shared directory: ***
[2025-06-04 13:38:46] total 387932
[2025-06-04 13:38:46] -rw-r--r--. 2 boincer umatlas 216620477 Jun  4 10:00 ATLAS.root_0
[2025-06-04 13:38:46] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 10:00 input.tar.gz
[2025-06-04 13:38:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:00 start_atlas.sh
[2025-06-04 13:38:46] -rw-------. 1 boincer umatlas 178540079 Jun  4 13:36 HITS.pool.root.1
[2025-06-04 13:38:46] -rw-------. 1 boincer umatlas   1546240 Jun  4 13:38 result.tar.gz
13:38:47 (247761): run_atlas exited; CPU time 93382.522690
13:38:47 (247761): called boinc_finish(0)

</stderr_txt>
]]>

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