Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:52:19 (12792): wrapper (7.7.26015): starting
09:52:19 (12792): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:52:19] Arguments: --nthreads 12
[2025-06-04 09:52:19] Threads: 12
[2025-06-04 09:52:19] Checking for CVMFS
[2025-06-04 09:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:52:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:52:19] 2.11.2.0 2914 35766 85500 146781 3 56 18724111 20275200 1 130560 0 16207378 99.983 6260294 7652 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:52:19] CVMFS is ok
[2025-06-04 09:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:52:19] Further information can be found at the LHC@home message board.
[2025-06-04 09:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:52:19] Checking for apptainer binary...
[2025-06-04 09:52:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:52:19] Running /usr/bin/apptainer --version
[2025-06-04 09:52:19] apptainer version 1.3.2-1.el7
[2025-06-04 09:52:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:52:21] c-205-5.aglt2.org
[2025-06-04 09:52:21] apptainer works
[2025-06-04 09:52:21] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:52:21] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:52:21] Starting ATLAS job with PandaID=6679631534
[2025-06-04 09:52:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:56:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:56:14]  guid=bda7ba1d-da91-4e00-ad7c-0dde523be26b
[2025-06-04 10:56:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:56:14]  is_altstaged=None
[2025-06-04 10:56:14]  is_tar=False
[2025-06-04 10:56:14]  lfn=log.45006595._056552.job.log.tgz.1
[2025-06-04 10:56:14]  mtime=0
[2025-06-04 10:56:14]  protocol_id=None
[2025-06-04 10:56:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:56:14]  replicas=None
[2025-06-04 10:56:14]  scope=mc23_13p6TeV
[2025-06-04 10:56:14]  status=None
[2025-06-04 10:56:14]  status_code=0
[2025-06-04 10:56:14]  storage_token=
[2025-06-04 10:56:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679631534/log.45006595._056552.job.log.tgz.1
[2025-06-04 10:56:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/00/log.45006595._056552.job.log.tgz.1
[2025-06-04 10:56:14]  workdir=None
[2025-06-04 10:56:14] ]
[2025-06-04 10:56:14] 2025-06-04 14:55:53,427 | INFO     | transferring file log.45006595._056552.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679631534/log.45006595._056552.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:56:14] 2025-06-04 14:55:53,428 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679631534/log.45006595._056552.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056552.job
[2025-06-04 10:56:14] 2025-06-04 14:55:53,453 | INFO     | adding to output.list: log.45006595._056552.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/00/log.45006595._056552.job.log.tg
[2025-06-04 10:56:14] 2025-06-04 14:55:53,454 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:56:14] 2025-06-04 14:55:53,454 | INFO     | summary of transferred files:
[2025-06-04 10:56:14] 2025-06-04 14:55:53,454 | INFO     |  -- lfn=log.45006595._056552.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:56:14] 2025-06-04 14:55:53,454 | INFO     | stage-out finished correctly
[2025-06-04 10:56:14] 2025-06-04 14:55:53,602 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:56:14] 2025-06-04 14:55:54,640 | INFO     | monitor loop #288: job 0:6679631534 is in state 'finished'
[2025-06-04 10:56:14] 2025-06-04 14:55:54,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:56:14] 2025-06-04 14:55:55,083 | INFO     | job 6679631534 has state=finished
[2025-06-04 10:56:14] 2025-06-04 14:55:55,083 | INFO     | preparing for final server update for job 6679631534 in state='finished'
[2025-06-04 10:56:14] 2025-06-04 14:55:55,084 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:56:14] 2025-06-04 14:55:55,084 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:56:14] 2025-06-04 14:55:55,084 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:56:14] 2025-06-04 14:55:55,085 | INFO     | job 6679631534 has finished - writing final server update
[2025-06-04 10:56:14] 2025-06-04 14:55:55,085 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:56:14] 2025-06-04 14:55:55,086 | INFO     | executing command: lscpu
[2025-06-04 10:56:14] 2025-06-04 14:55:55,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:56:14] 2025-06-04 14:55:57,143 | INFO     | monitor loop #289: job 0:6679631534 is in state 'finished'
[2025-06-04 10:56:14] 2025-06-04 14:55:57,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,647 | INFO     | monitor loop #290: job 0:6679631534 is in state 'finished'
[2025-06-04 10:56:14] 2025-06-04 14:55:59,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,799 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:56:14] 2025-06-04 14:55:59,799 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679631534/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,801 | INFO     | extracted standard info from prmon json
[2025-06-04 10:56:14] 2025-06-04 14:55:59,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:56:14] 2025-06-04 14:55:59,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:56:14] 2025-06-04 14:55:59,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:56:14] 2025-06-04 14:55:59,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:56:14] 2025-06-04 14:55:59,804 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:56:14] 2025-06-04 14:55:59,805 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,805 | INFO     | sum of deviations: -5219688016.0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,805 | INFO     | mean x: 1749047137.0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,805 | INFO     | mean y: 2860767.4
[2025-06-04 10:56:14] 2025-06-04 14:55:59,806 | INFO     | -- intersect: 177023196198.6893
[2025-06-04 10:56:14] 2025-06-04 14:55:59,806 | INFO     | intersect: 177023196198.6893
[2025-06-04 10:56:14] 2025-06-04 14:55:59,806 | INFO     | chi2: 0.05315257458909201
[2025-06-04 10:56:14] 2025-06-04 14:55:59,806 | INFO     | -- intersect: 177023196198.6893
[2025-06-04 10:56:14] 2025-06-04 14:55:59,806 | INFO     | current memory leak: -101.21 B/s (using 55 data points, chi2=0.05)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,807 | INFO     | ..............................
[2025-06-04 10:56:14] 2025-06-04 14:55:59,807 | INFO     | . Timing measurements:
[2025-06-04 10:56:14] 2025-06-04 14:55:59,807 | INFO     | . get job = 0 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . initial setup = 2 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . payload setup = 9 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . stage-in = 0 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . payload execution = 3768 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . stage-out = 0 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | . log creation = 0 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,808 | INFO     | ..............................
[2025-06-04 10:56:14] 2025-06-04 14:55:59,895 | INFO     | 
[2025-06-04 10:56:14] 2025-06-04 14:55:59,895 | INFO     | job summary report
[2025-06-04 10:56:14] 2025-06-04 14:55:59,895 | INFO     | --------------------------------------------------
[2025-06-04 10:56:14] 2025-06-04 14:55:59,895 | INFO     | PanDA job id: 6679631534
[2025-06-04 10:56:14] 2025-06-04 14:55:59,895 | INFO     | task id: 45006595
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | errors: (none)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | pilot state: finished 
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | transexitcode: 0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | exeerrorcode: 0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,896 | INFO     | exeerrordiag: 
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | exitcode: 0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | exitmsg: OK
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | cpuconsumptiontime: 40151 s
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | nevents: 400
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | neventsw: 0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | pid: 22821
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | pgrp: 22821
[2025-06-04 10:56:14] 2025-06-04 14:55:59,897 | INFO     | corecount: 12
[2025-06-04 10:56:14] 2025-06-04 14:55:59,898 | INFO     | event service: False
[2025-06-04 10:56:14] 2025-06-04 14:55:59,898 | INFO     | sizes: {0: 2397291, 5: 2397497, 11: 2397553, 3781: 2423176, 3783: 2432173, 3789: 2432287}
[2025-06-04 10:56:14] 2025-06-04 14:55:59,898 | INFO     | --------------------------------------------------
[2025-06-04 10:56:14] 2025-06-04 14:55:59,898 | INFO     | 
[2025-06-04 10:56:14] 2025-06-04 14:55:59,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:56:14] 2025-06-04 14:55:59,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:56:14] 2025-06-04 14:55:59,927 | INFO     | job 6679631534 has completed (purged errors)
[2025-06-04 10:56:14] 2025-06-04 14:55:59,927 | INFO     | overall cleanup function is called
[2025-06-04 10:56:14] 2025-06-04 14:56:00,935 | INFO     | --- collectZombieJob: --- 10, [22821]
[2025-06-04 10:56:14] 2025-06-04 14:56:00,935 | INFO     | zombie collector waiting for pid 22821
[2025-06-04 10:56:14] 2025-06-04 14:56:00,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:56:14] 2025-06-04 14:56:00,935 | INFO     | collected zombie processes
[2025-06-04 10:56:14] 2025-06-04 14:56:00,936 | INFO     | will attempt to kill all subprocesses of pid=22821
[2025-06-04 10:56:14] 2025-06-04 14:56:01,030 | INFO     | process IDs to be killed: [22821] (in reverse order)
[2025-06-04 10:56:14] 2025-06-04 14:56:01,078 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:56:14] 2025-06-04 14:56:01,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:56:14] 2025-06-04 14:56:01,082 | INFO     | did not find any defunct processes belonging to 22821
[2025-06-04 10:56:14] 2025-06-04 14:56:01,085 | INFO     | did not find any defunct processes belonging to 22821
[2025-06-04 10:56:14] 2025-06-04 14:56:01,086 | INFO     | ready for new job
[2025-06-04 10:56:14] 2025-06-04 14:56:01,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:56:14] 2025-06-04 14:56:01,088 | INFO     | **************************************
[2025-06-04 10:56:14] 2025-06-04 14:56:01,088 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:56:14] 2025-06-04 14:56:01,088 | INFO     | **************************************
[2025-06-04 10:56:14] 2025-06-04 14:56:01,088 | INFO     | 
[2025-06-04 10:56:14] 2025-06-04 14:56:01,089 | INFO     | architecture information:
[2025-06-04 10:56:14] 2025-06-04 14:56:01,089 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:56:14] 2025-06-04 14:56:01,105 | INFO     | cat /etc/os-release:
[2025-06-04 10:56:14] NAME="CentOS Linux"
[2025-06-04 10:56:14] VERSION="7 (Core)"
[2025-06-04 10:56:14] ID="centos"
[2025-06-04 10:56:14] ID_LIKE="rhel fedora"
[2025-06-04 10:56:14] VERSION_ID="7"
[2025-06-04 10:56:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:56:14] ANSI_COLOR="0;31"
[2025-06-04 10:56:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:56:14] HOME_URL="https://www.centos.org/"
[2025-06-04 10:56:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:56:14] 
[2025-06-04 10:56:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:56:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:56:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:56:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:56:14] 
[2025-06-04 10:56:14] 2025-06-04 14:56:01,105 | INFO     | **************************************
[2025-06-04 10:56:14] 2025-06-04 14:56:01,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:56:14] 2025-06-04 14:56:01,622 | INFO     | sufficient remaining disk space (29424091136 B)
[2025-06-04 10:56:14] 2025-06-04 14:56:01,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:56:14] 2025-06-04 14:56:01,623 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:56:14] 2025-06-04 14:56:01,623 | INFO     | update_server=False
[2025-06-04 10:56:14] 2025-06-04 14:56:01,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:56:14] 2025-06-04 14:56:01,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:56:14] 2025-06-04 14:56:01,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:56:14] 2025-06-04 14:56:01,625 | INFO     | aborting loop
[2025-06-04 10:56:14] 2025-06-04 14:56:01,625 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:56:14] 2025-06-04 14:56:01,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:56:14] 2025-06-04 14:56:01,628 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:56:14] 2025-06-04 14:56:01,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:56:14] 2025-06-04 14:56:01,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:56:14] 2025-06-04 14:56:01,868 | INFO     | all job control threads have been joined
[2025-06-04 10:56:14] 2025-06-04 14:56:02,178 | INFO     | all data control threads have been joined
[2025-06-04 10:56:14] 2025-06-04 14:56:02,625 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:02,632 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:02,633 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:02,727 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:02,853 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:02,869 | INFO     | [job] control thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,007 | INFO     | all payload control threads have been joined
[2025-06-04 10:56:14] 2025-06-04 14:56:03,183 | INFO     | [data] control thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,256 | INFO     | [job] validate thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,337 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,630 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,665 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:03,865 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:04,012 | INFO     | [payload] control thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:04,113 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:04,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:56:14] 2025-06-04 14:56:08,199 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:56:14] 2025-06-04 14:56:09,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440660334400)>', '<ExcThread(monitor, started 140440355448576)>']
[2025-06-04 10:56:14] 2025-06-04 14:56:09,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:56:14] 2025-06-04 14:56:09,670 | INFO     | [monitor] control thread has ended
[2025-06-04 10:56:14] 2025-06-04 14:56:14,280 | INFO     | all workflow threads have been joined
[2025-06-04 10:56:14] 2025-06-04 14:56:14,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:56:14] 2025-06-04 14:56:14,290 | INFO     | traces error code: 0
[2025-06-04 10:56:14] 2025-06-04 14:56:14,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:56:14] 2025-06-04 14:56:14,388 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:56:14] 2025-06-04 14:56:14,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:56:14] 2025-06-04 14:56:14,395 [wrapper] pilotpid: 16385
[2025-06-04 10:56:14] 2025-06-04 14:56:14,398 [wrapper] Pilot exit status: 0
[2025-06-04 10:56:14] 2025-06-04 14:56:14,415 [wrapper] pandaids: 6679631534
[2025-06-04 10:56:14] 2025-06-04 14:56:14,453 [wrapper] cleanup supervisor_pilot 29638 16386
[2025-06-04 10:56:14] 2025-06-04 14:56:14,457 [wrapper] Test setup, not cleaning
[2025-06-04 10:56:14] 2025-06-04 14:56:14,460 [wrapper] apfmon messages muted
[2025-06-04 10:56:14] 2025-06-04 14:56:14,464 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:56:14] 2025-06-04 14:56:14,468 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:56:14]  *** Error codes and diagnostics ***
[2025-06-04 10:56:14]     "exeErrorCode": 0,
[2025-06-04 10:56:14]     "exeErrorDiag": "",
[2025-06-04 10:56:14]     "pilotErrorCode": 0,
[2025-06-04 10:56:14]     "pilotErrorDiag": "",
[2025-06-04 10:56:14]  *** Listing of results directory ***
[2025-06-04 10:56:14] total 384624
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 06:41 pilot3.tar.gz
[2025-06-04 10:56:14] -rwx------ 1 boincer umatlas     37140 Jun  4 06:54 runpilot2-wrapper.sh
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 06:54 queuedata.json
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:56:14] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:52 run_atlas
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:52 job.xml
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas 214709321 Jun  4 09:52 EVNT.45006593._001766.pool.root.1
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:52 start_atlas.sh
[2025-06-04 10:56:14] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:52 shared
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 09:52 input.tar.gz
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:52 boinc_lockfile
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 09:52 pandaJob.out
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas    986819 Jun  4 09:52 agis_schedconf.cvmfs.json
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas   1598969 Jun  4 09:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:56:14] drwx------ 4 boincer umatlas      4096 Jun  4 09:52 pilot3
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 10:54 init_data.xml
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas        95 Jun  4 10:55 pilot_heartbeat.json
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas 173840564 Jun  4 10:55 HITS.45006595._056552.pool.root.1
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:55 boinc_mmap_file
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:55 wrapper_checkpoint.txt
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:55 boinc_task_state.xml
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas      1046 Jun  4 10:55 memory_monitor_summary.json
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas    365261 Jun  4 10:55 log.45006595._056552.job.log.tgz.1
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas      7754 Jun  4 10:55 heartbeat.json
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas      4476 Jun  4 10:56 pilotlog.txt
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas    375196 Jun  4 10:56 log.45006595._056552.job.log.1
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas       357 Jun  4 10:56 output.list
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:56 runtime_log
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas    757760 Jun  4 10:56 result.tar.gz
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 10:56 runtime_log.err
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas       658 Jun  4 10:56 QHKKDm4v0g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmT2aKDmsMk7jn.diag
[2025-06-04 10:56:14] -rw-r--r-- 1 boincer umatlas     21274 Jun  4 10:56 stderr.txt
[2025-06-04 10:56:14] HITS file was successfully produced:
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas 173840564 Jun  4 10:55 shared/HITS.pool.root.1
[2025-06-04 10:56:14]  *** Contents of shared directory: ***
[2025-06-04 10:56:14] total 380704
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas 214709321 Jun  4 09:52 ATLAS.root_0
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:52 start_atlas.sh
[2025-06-04 10:56:14] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 09:52 input.tar.gz
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas 173840564 Jun  4 10:55 HITS.pool.root.1
[2025-06-04 10:56:14] -rw------- 1 boincer umatlas    757760 Jun  4 10:56 result.tar.gz
10:56:15 (12792): run_atlas exited; CPU time 40124.655982
10:56:15 (12792): called boinc_finish(0)

</stderr_txt>
]]>

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