Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:14 (3056977): wrapper (7.7.26015): starting
09:51:14 (3056977): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:51:14] Arguments: --nthreads 8
[2025-06-04 09:51:14] Threads: 8
[2025-06-04 09:51:14] Checking for CVMFS
[2025-06-04 09:51:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:51:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:51:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:51:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:51:14] 2.12.6.0 274037 172005 1061420 146781 0 412 36374849 40960001 35732 130560 2 756538581 99.755 487626333 19144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:51:14] CVMFS is ok
[2025-06-04 09:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:51:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:51:14] Further information can be found at the LHC@home message board.
[2025-06-04 09:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:51:14] Checking for apptainer binary...
[2025-06-04 09:51:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:51:14] Running /usr/bin/apptainer --version
[2025-06-04 09:51:14] apptainer version 1.4.1-1.el9
[2025-06-04 09:51:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:51:14] lc-12-9.aglt2.org
[2025-06-04 09:51:14] apptainer works
[2025-06-04 09:51:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:51:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:51:14] Starting ATLAS job with PandaID=6679435807
[2025-06-04 09:51:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:24:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:24:28]  is_tar=False
[2025-06-04 11:24:28]  lfn=log.45006595._056293.job.log.tgz.1
[2025-06-04 11:24:28]  mtime=0
[2025-06-04 11:24:28]  protocol_id=None
[2025-06-04 11:24:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:24:28]  replicas=None
[2025-06-04 11:24:28]  scope=mc23_13p6TeV
[2025-06-04 11:24:28]  status=None
[2025-06-04 11:24:28]  status_code=0
[2025-06-04 11:24:28]  storage_token=
[2025-06-04 11:24:28]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679435807/log.45006595._056293.job.log.tgz.1
[2025-06-04 11:24:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/0b/log.45006595._056293.job.log.tgz.1
[2025-06-04 11:24:28]  workdir=None
[2025-06-04 11:24:28] ]
[2025-06-04 11:24:28] 2025-06-04 15:24:00,844 | INFO     | transferring file log.45006595._056293.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679435807/log.45006595._056293.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:24:28] 2025-06-04 15:24:00,844 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679435807/log.45006595._056293.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056293.job
[2025-06-04 11:24:28] 2025-06-04 15:24:00,858 | INFO     | adding to output.list: log.45006595._056293.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/0b/log.45006595._056293.job.log.tg
[2025-06-04 11:24:28] 2025-06-04 15:24:00,859 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:24:28] 2025-06-04 15:24:00,859 | INFO     | summary of transferred files:
[2025-06-04 11:24:28] 2025-06-04 15:24:00,859 | INFO     |  -- lfn=log.45006595._056293.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:24:28] 2025-06-04 15:24:00,859 | INFO     | stage-out finished correctly
[2025-06-04 11:24:28] 2025-06-04 15:24:01,604 | INFO     | monitor loop #387: job 0:6679435807 is in state 'finished'
[2025-06-04 11:24:28] 2025-06-04 15:24:01,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:28] 2025-06-04 15:24:02,104 | INFO     | PID=3061058 has CPU usage=16.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 11:24:28] 2025-06-04 15:24:02,104 | INFO     | .. there are 59 such processes running
[2025-06-04 11:24:28] 2025-06-04 15:24:03,060 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:24:28] 2025-06-04 15:24:03,503 | INFO     | job 6679435807 has state=finished
[2025-06-04 11:24:28] 2025-06-04 15:24:03,504 | INFO     | preparing for final server update for job 6679435807 in state='finished'
[2025-06-04 11:24:28] 2025-06-04 15:24:03,505 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:24:28] 2025-06-04 15:24:03,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:24:28] 2025-06-04 15:24:03,505 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:24:28] 2025-06-04 15:24:03,505 | INFO     | job 6679435807 has finished - writing final server update
[2025-06-04 11:24:28] 2025-06-04 15:24:03,505 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:24:28] 2025-06-04 15:24:03,512 | INFO     | executing command: lscpu
[2025-06-04 11:24:28] 2025-06-04 15:24:03,595 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:24:28] 2025-06-04 15:24:04,107 | INFO     | monitor loop #388: job 0:6679435807 is in state 'finished'
[2025-06-04 11:24:28] 2025-06-04 15:24:04,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:28] 2025-06-04 15:24:06,610 | INFO     | monitor loop #389: job 0:6679435807 is in state 'finished'
[2025-06-04 11:24:28] 2025-06-04 15:24:06,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:28] 2025-06-04 15:24:07,963 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:24:28] 2025-06-04 15:24:07,964 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679435807/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:24:28] 2025-06-04 15:24:07,965 | INFO     | extracted standard info from prmon json
[2025-06-04 11:24:28] 2025-06-04 15:24:07,965 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:24:28] 2025-06-04 15:24:07,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:24:28] 2025-06-04 15:24:07,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:24:28] 2025-06-04 15:24:07,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:24:28] 2025-06-04 15:24:07,968 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:24:28] 2025-06-04 15:24:07,969 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 11:24:28] 2025-06-04 15:24:07,969 | INFO     | sum of deviations: 7556551564.5
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | mean x: 1749047955.5
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | mean y: 2182793.75
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | -- intersect: -71921288395.93881
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | intersect: -71921288395.93881
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | chi2: 1.1475768910172688
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | -- intersect: -71921288395.93881
[2025-06-04 11:24:28] 2025-06-04 15:24:07,970 | INFO     | current memory leak: 41.12 B/s (using 84 data points, chi2=1.15)
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | ..............................
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . Timing measurements:
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . get job = 0 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . initial setup = 2 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . payload setup = 8 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . stage-in = 0 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . payload execution = 5522 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . stage-out = 0 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,971 | INFO     | . log creation = 0 s
[2025-06-04 11:24:28] 2025-06-04 15:24:07,972 | INFO     | ..............................
[2025-06-04 11:24:28] 2025-06-04 15:24:08,073 | INFO     | 
[2025-06-04 11:24:28] 2025-06-04 15:24:08,073 | INFO     | job summary report
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | --------------------------------------------------
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | PanDA job id: 6679435807
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | task id: 45006595
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | errors: (none)
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | pilot state: finished 
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | transexitcode: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:08,074 | INFO     | exeerrorcode: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | exeerrordiag: 
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | exitcode: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | exitmsg: OK
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | cpuconsumptiontime: 36248 s
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | nevents: 400
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | neventsw: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | pid: 3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | pgrp: 3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:08,075 | INFO     | corecount: 8
[2025-06-04 11:24:28] 2025-06-04 15:24:08,076 | INFO     | event service: False
[2025-06-04 11:24:28] 2025-06-04 15:24:08,076 | INFO     | sizes: {0: 2397290, 6: 2397496, 11: 2397524, 5535: 2423953, 5536: 2432894, 5538: 2432950, 5543: 2433248}
[2025-06-04 11:24:28] 2025-06-04 15:24:08,076 | INFO     | --------------------------------------------------
[2025-06-04 11:24:28] 2025-06-04 15:24:08,076 | INFO     | 
[2025-06-04 11:24:28] 2025-06-04 15:24:08,076 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:24:28] 2025-06-04 15:24:08,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | job 6679435807 has completed (purged errors)
[2025-06-04 11:24:28] 2025-06-04 15:24:08,097 | INFO     | overall cleanup function is called
[2025-06-04 11:24:28] 2025-06-04 15:24:09,103 | INFO     | --- collectZombieJob: --- 10, [3071106]
[2025-06-04 11:24:28] 2025-06-04 15:24:09,103 | INFO     | zombie collector waiting for pid 3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:09,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:24:28] 2025-06-04 15:24:09,104 | INFO     | collected zombie processes
[2025-06-04 11:24:28] 2025-06-04 15:24:09,104 | INFO     | will attempt to kill all subprocesses of pid=3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:09,623 | INFO     | process IDs to be killed: [3071106] (in reverse order)
[2025-06-04 11:24:28] 2025-06-04 15:24:09,778 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:24:28] 2025-06-04 15:24:09,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:24:28] 2025-06-04 15:24:09,801 | INFO     | did not find any defunct processes belonging to 3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:09,824 | INFO     | did not find any defunct processes belonging to 3071106
[2025-06-04 11:24:28] 2025-06-04 15:24:09,824 | INFO     | ready for new job
[2025-06-04 11:24:28] 2025-06-04 15:24:09,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:24:28] 2025-06-04 15:24:09,826 | INFO     | **************************************
[2025-06-04 11:24:28] 2025-06-04 15:24:09,826 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:24:28] 2025-06-04 15:24:09,826 | INFO     | **************************************
[2025-06-04 11:24:28] 2025-06-04 15:24:09,826 | INFO     | 
[2025-06-04 11:24:28] 2025-06-04 15:24:09,843 | INFO     | architecture information:
[2025-06-04 11:24:28] 2025-06-04 15:24:09,844 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:24:28] 2025-06-04 15:24:09,861 | INFO     | cat /etc/os-release:
[2025-06-04 11:24:28] NAME="CentOS Linux"
[2025-06-04 11:24:28] VERSION="7 (Core)"
[2025-06-04 11:24:28] ID="centos"
[2025-06-04 11:24:28] ID_LIKE="rhel fedora"
[2025-06-04 11:24:28] VERSION_ID="7"
[2025-06-04 11:24:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:24:28] ANSI_COLOR="0;31"
[2025-06-04 11:24:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:24:28] HOME_URL="https://www.centos.org/"
[2025-06-04 11:24:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:24:28] 
[2025-06-04 11:24:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:24:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:24:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:24:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:24:28] 
[2025-06-04 11:24:28] 2025-06-04 15:24:09,861 | INFO     | **************************************
[2025-06-04 11:24:28] 2025-06-04 15:24:10,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:24:28] 2025-06-04 15:24:10,383 | INFO     | sufficient remaining disk space (418231877632 B)
[2025-06-04 11:24:28] 2025-06-04 15:24:10,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:24:28] 2025-06-04 15:24:10,383 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:24:28] 2025-06-04 15:24:10,384 | INFO     | update_server=False
[2025-06-04 11:24:28] 2025-06-04 15:24:10,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:24:28] 2025-06-04 15:24:10,384 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:24:28] 2025-06-04 15:24:10,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:24:28] 2025-06-04 15:24:10,385 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:24:28] 2025-06-04 15:24:10,385 | INFO     | aborting loop
[2025-06-04 11:24:28] 2025-06-04 15:24:10,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:24:28] 2025-06-04 15:24:10,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:24:28] 2025-06-04 15:24:11,177 | INFO     | all job control threads have been joined
[2025-06-04 11:24:28] 2025-06-04 15:24:11,277 | INFO     | all data control threads have been joined
[2025-06-04 11:24:28] 2025-06-04 15:24:11,283 | INFO     | all payload control threads have been joined
[2025-06-04 11:24:28] 2025-06-04 15:24:11,389 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:11,389 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:11,446 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:11,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:24:28] 2025-06-04 15:24:11,476 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:11,633 | INFO     | [job] validate thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,004 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,153 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,182 | INFO     | [job] control thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,282 | INFO     | [data] control thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,288 | INFO     | [payload] control thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,612 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:12,672 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:13,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:24:28] 2025-06-04 15:24:13,474 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:13,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:24:28] 2025-06-04 15:24:14,089 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:17,670 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:21,130 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:24:28] 2025-06-04 15:24:22,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:24:28] 2025-06-04 15:24:23,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532066584384)>', '<ExcThread(monitor, started 140531573180160)>']
[2025-06-04 11:24:28] 2025-06-04 15:24:23,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:24:28] 2025-06-04 15:24:23,450 | INFO     | [monitor] control thread has ended
[2025-06-04 11:24:28] 2025-06-04 15:24:28,081 | INFO     | all workflow threads have been joined
[2025-06-04 11:24:28] 2025-06-04 15:24:28,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:24:28] 2025-06-04 15:24:28,082 | INFO     | traces error code: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:28,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:24:28] 2025-06-04 15:24:28,279 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:24:28] 2025-06-04 15:24:28,282 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:24:28] 2025-06-04 15:24:28,285 [wrapper] pilotpid: 3061058
[2025-06-04 11:24:28] 2025-06-04 15:24:28,288 [wrapper] Pilot exit status: 0
[2025-06-04 11:24:28] 2025-06-04 15:24:28,298 [wrapper] pandaids: 6679435807
[2025-06-04 11:24:28] 2025-06-04 15:24:28,403 [wrapper] cleanup supervisor_pilot 3793824 3061059
[2025-06-04 11:24:28] 2025-06-04 15:24:28,406 [wrapper] Test setup, not cleaning
[2025-06-04 11:24:28] 2025-06-04 15:24:28,409 [wrapper] apfmon messages muted
[2025-06-04 11:24:28] 2025-06-04 15:24:28,412 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:24:28] 2025-06-04 15:24:28,415 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:24:28]  *** Error codes and diagnostics ***
[2025-06-04 11:24:28]     "exeErrorCode": 0,
[2025-06-04 11:24:28]     "exeErrorDiag": "",
[2025-06-04 11:24:28]     "pilotErrorCode": 0,
[2025-06-04 11:24:28]     "pilotErrorDiag": "",
[2025-06-04 11:24:28]  *** Listing of results directory ***
[2025-06-04 11:24:28] total 386960
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:46 pilot3.tar.gz
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:03 queuedata.json
[2025-06-04 11:24:28] -rwx------. 1 boincer umatlas     37140 Jun  4 05:03 runpilot2-wrapper.sh
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:24:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:51 run_atlas
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:51 job.xml
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas 214618807 Jun  4 09:51 EVNT.45006593._001664.pool.root.1
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 09:51 input.tar.gz
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 11:24:28] drwxrwx--x. 2 boincer umatlas        68 Jun  4 09:51 shared
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:51 boinc_lockfile
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 09:51 pandaJob.out
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas    986819 Jun  4 09:51 agis_schedconf.cvmfs.json
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:24:28] drwx------. 4 boincer umatlas      4096 Jun  4 09:51 pilot3
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas      6879 Jun  4 11:22 init_data.xml
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas 176166320 Jun  4 11:23 HITS.45006595._056293.pool.root.1
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:23 boinc_task_state.xml
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas        95 Jun  4 11:23 pilot_heartbeat.json
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas      1037 Jun  4 11:23 memory_monitor_summary.json
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas    299154 Jun  4 11:24 log.45006595._056293.job.log.tgz.1
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:24 wrapper_checkpoint.txt
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas      7714 Jun  4 11:24 heartbeat.json
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas      4549 Jun  4 11:24 pilotlog.txt
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas    523415 Jun  4 11:24 log.45006595._056293.job.log.1
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas       357 Jun  4 11:24 output.list
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:24 runtime_log
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas    839680 Jun  4 11:24 result.tar.gz
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas       652 Jun  4 11:24 VTxMDm4Czg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm30aKDmebinqn.diag
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 11:24 runtime_log.err
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:24 boinc_mmap_file
[2025-06-04 11:24:28] -rw-r--r--. 1 boincer umatlas     21558 Jun  4 11:24 stderr.txt
[2025-06-04 11:24:28] HITS file was successfully produced:
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas 176166320 Jun  4 11:23 shared/HITS.pool.root.1
[2025-06-04 11:24:28]  *** Contents of shared directory: ***
[2025-06-04 11:24:28] total 382968
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas 214618807 Jun  4 09:51 ATLAS.root_0
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 09:51 input.tar.gz
[2025-06-04 11:24:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas 176166320 Jun  4 11:23 HITS.pool.root.1
[2025-06-04 11:24:28] -rw-------. 1 boincer umatlas    839680 Jun  4 11:24 result.tar.gz
11:24:49 (3056977): run_atlas exited; CPU time 36551.520549
11:24:49 (3056977): called boinc_finish(0)

</stderr_txt>
]]>

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