Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 22:00:26 (13724): Detected: vboxwrapper 26206
2025-06-04 22:00:26 (13724): Detected: BOINC client v8.0.2
2025-06-04 22:00:27 (13724): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-06-04 22:00:27 (13724): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 22:00:28 (13724): Create VM. (boinc_c3105db02137b854, slot#0)
2025-06-04 22:00:29 (13724): Setting Memory Size for VM. (4800MB)
2025-06-04 22:00:29 (13724): Setting CPU Count for VM. (8)
2025-06-04 22:00:29 (13724): Setting Chipset Options for VM.
2025-06-04 22:00:29 (13724): Setting Graphics Controller Options for VM.
2025-06-04 22:00:30 (13724): Setting Boot Options for VM.
2025-06-04 22:00:30 (13724): Setting Network Configuration for NAT.
2025-06-04 22:00:30 (13724): Enabling VM Network Access.
2025-06-04 22:00:30 (13724): Disabling USB Support for VM.
2025-06-04 22:00:31 (13724): Disabling COM Port Support for VM.
2025-06-04 22:00:31 (13724): Disabling LPT Port Support for VM.
2025-06-04 22:00:31 (13724): Disabling Audio Support for VM.
2025-06-04 22:00:31 (13724): Disabling Clipboard Support for VM.
2025-06-04 22:00:32 (13724): Disabling Drag and Drop Support for VM.
2025-06-04 22:00:32 (13724): Adding storage controller(s) to VM.
2025-06-04 22:00:32 (13724): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 22:00:35 (13724): Adding VirtualBox Guest Additions to VM.
2025-06-04 22:00:35 (13724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 22:00:36 (13724): forwarding host port 54240 to guest port 80
2025-06-04 22:00:36 (13724): Enabling remote desktop for VM.
2025-06-04 22:00:36 (13724): Required extension pack not installed, remote desktop not enabled.
2025-06-04 22:00:36 (13724): Enabling shared directory for VM.
2025-06-04 22:00:37 (13724): Starting VM using VBoxManage interface. (boinc_c3105db02137b854, slot#0)
2025-06-04 22:00:41 (13724): Successfully started VM. (PID = '4940')
2025-06-04 22:00:41 (13724): Reporting VM Process ID to BOINC.
2025-06-04 22:00:41 (13724): Guest Log: BIOS: VirtualBox 7.1.6
2025-06-04 22:00:41 (13724): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 22:00:41 (13724): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 22:00:41 (13724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 22:00:41 (13724): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 22:00:41 (13724): Detected: Web Application Enabled (http://localhost:54240)
2025-06-04 22:00:41 (13724): Preference change detected
2025-06-04 22:00:41 (13724): Setting CPU throttle for VM. (100%)
2025-06-04 22:00:42 (13724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 22:00:43 (13724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 22:00:43 (13724): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 22:00:46 (13724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 22:00:46 (13724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 22:00:46 (13724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 22:00:52 (13724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 22:00:52 (13724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 22:00:57 (13724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000090 main     Log opened 2025-06-04T22:00:56.037950000Z
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000156 main     OS Product: Linux
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000199 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000215 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000231 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000231 main     Process ID: 1376
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000231 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 22:00:57 (13724): Guest Log: 00:00:00.000639 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 22:00:57 (13724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 22:00:57 (13724): Guest Log: [INFO] Mounting shared directory
2025-06-04 22:00:57 (13724): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 22:01:07 (13724): Guest Log: 00:00:10.027737 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 354 344 000ns (GuestNow=1 749 067 267 685 110 000 ns GuestLast=1 749 074 456 039 454 000 ns fSetTimeLastLoop=true )
2025-06-04 22:01:11 (13724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 22:01:11 (13724): Guest Log: [INFO] Detected branch: prod
2025-06-04 22:01:12 (13724): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 22:01:12 (13724): Guest Log: Copying input files
2025-06-04 22:01:12 (13724): Guest Log: Copied input files into RunAtlas.
2025-06-04 22:01:12 (13724): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 22:01:12 (13724): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 22:01:12 (13724): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 22:01:12 (13724): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 22:01:26 (13724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 22:01:27 (13724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 22:01:27 (13724): Guest Log: 2.6.3.0 1687 0 30188 146792 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 22:01:27 (13724): Guest Log: copied the webapp to /var/www
2025-06-04 22:01:27 (13724): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 22:01:27 (13724): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 22:01:29 (13724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 22:01:29 (13724): Guest Log:  *** Starting ATLAS job. (PandaID=6679252430 taskID=45006595) ***
2025-06-04 22:51:16 (13724): Guest Log:  *** Job finished ***
2025-06-04 22:51:16 (13724): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:02,679 | INFO     | [payload] control thread has finished
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:03,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:07,402 | INFO     | [data] queue_monitor thread has finished
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:08,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486943024960)>', '<ExcThread(monitor, started 140486716204800)>']
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:08,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:08,986 | INFO     | [monitor] control thread has ended
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:13,900 | INFO     | all workflow threads have been joined
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:13,900 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:13,900 | INFO     | traces error code: 0
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:13,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,174 [wrapper] ==== pilot stdout END ====
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,177 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,180 [wrapper] pilotpid: 6018
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,183 [wrapper] Pilot exit status: 0
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,585 [wrapper] pandaids: 6679252430
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,606 [wrapper] cleanup supervisor_pilot 25956 6019
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,610 [wrapper] Test setup, not cleaning
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,613 [wrapper] apfmon messages muted
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,616 [wrapper] ==== wrapper stdout END ====
2025-06-04 22:51:16 (13724): Guest Log: 2025-06-04 20:51:14,618 [wrapper] ==== wrapper stderr END ====
2025-06-04 22:51:16 (13724): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 22:51:16 (13724): Guest Log:     "exeErrorCode": 0,
2025-06-04 22:51:16 (13724): Guest Log:     "exeErrorDiag": "",
2025-06-04 22:51:16 (13724): Guest Log:     "pilotErrorCode": 0,
2025-06-04 22:51:16 (13724): Guest Log:     "pilotErrorDiag": "",
2025-06-04 22:51:16 (13724): Guest Log:  *** Listing of results directory ***
2025-06-04 22:51:16 (13724): Guest Log: total 171272
2025-06-04 22:51:16 (13724): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 08:46 pilot3.tar.gz
2025-06-04 22:51:16 (13724): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 08:56 runpilot2-wrapper.sh
2025-06-04 22:51:16 (13724): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 08:56 queuedata.json
2025-06-04 22:51:16 (13724): Guest Log: -rwxr-xr-x. 1 atlas atlas      9464 Jun  4 20:01 init_data.xml
2025-06-04 22:51:16 (13724): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  4 20:01 input.tar.gz
2025-06-04 22:51:16 (13724): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 20:01 start_atlas.sh
2025-06-04 22:51:16 (13724): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 20:01 EVNT.45006593._001604.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 22:51:16 (13724): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jun  4 20:01 pandaJob.out
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas    991007 Jun  4 20:05 agis_schedconf.cvmfs.json
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 20:05 agis_ddmendpoints.agis.ALL.json
2025-06-04 22:51:16 (13724): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 20:06 pilot3
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas 170564949 Jun  4 20:50 HITS.45006595._056057.pool.root.1
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 20:50 pilot_heartbeat.json
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  4 20:50 memory_monitor_summary.json
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas    267849 Jun  4 20:50 log.45006595._056057.job.log.tgz.1
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas      7678 Jun  4 20:50 heartbeat.json
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  4 20:51 pilotlog.txt
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas    260862 Jun  4 20:51 log.45006595._056057.job.log.1
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 20:51 output.list
2025-06-04 22:51:16 (13724): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 20:51 runtime_log
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas    542720 Jun  4 20:51 result.tar.gz
2025-06-04 22:51:16 (13724): Guest Log: -rw-r--r--. 1 atlas atlas      8585 Jun  4 20:51 runtime_log.err
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas       652 Jun  4 20:51 KFKMDm45yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmirnKDmzs3mSo.diag
2025-06-04 22:51:16 (13724): Guest Log: Looking for outputfile HITS.45006595._056057.pool.root.1
2025-06-04 22:51:16 (13724): Guest Log: HITS file was successfully produced
2025-06-04 22:51:16 (13724): Guest Log: -rw-------. 1 atlas atlas 170564949 Jun  4 20:50 /home/atlas/RunAtlas/HITS.45006595._056057.pool.root.1
2025-06-04 22:51:17 (13724): Guest Log: Successfully finished the ATLAS job!
2025-06-04 22:51:17 (13724): Guest Log: Copying the results back to the shared directory!
2025-06-04 22:51:17 (13724): Guest Log:  *** Contents of shared directory: ***
2025-06-04 22:51:17 (13724): Guest Log: total 378176
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root 215599809 Jun  4 20:00 ATLAS.root_0
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root 170564949 Jun  4 20:51 HITS.pool.root.1
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root      9464 Jun  4 20:00 init_data.xml
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  4 13:57 input.tar.gz
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root    542720 Jun  4  2025 result.tar.gz
2025-06-04 22:51:17 (13724): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 13:57 start_atlas.sh
2025-06-04 22:51:17 (13724): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 22:51:17 (13724): VM Completion File Detected.
2025-06-04 22:51:17 (13724): Powering off VM.
2025-06-04 22:51:18 (13724): Successfully stopped VM.
2025-06-04 22:51:18 (13724): Deregistering VM. (boinc_c3105db02137b854, slot#0)
2025-06-04 22:51:18 (13724): Removing network bandwidth throttle group from VM.
2025-06-04 22:51:18 (13724): Removing VM from VirtualBox.
22:51:24 (13724): called boinc_finish(0)

</stderr_txt>
]]>

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