Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:40 (48132): wrapper (7.7.26015): starting
09:58:40 (48132): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:58:40] Arguments: --nthreads 8
[2025-06-04 09:58:40] Threads: 8
[2025-06-04 09:58:40] Checking for CVMFS
[2025-06-04 09:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:58:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:58:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:58:41] 2.11.2.0 5309 11455 150404 146781 1 234 14014129 18432000 17166 130560 0 65702745 99.741 33005840 64357 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:58:41] CVMFS is ok
[2025-06-04 09:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:58:41] Further information can be found at the LHC@home message board.
[2025-06-04 09:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:58:41] Checking for apptainer binary...
[2025-06-04 09:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:58:41] Running /usr/bin/apptainer --version
[2025-06-04 09:58:41] apptainer version 1.3.2-1.el7
[2025-06-04 09:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:58:42] c-212-7.aglt2.org
[2025-06-04 09:58:42] apptainer works
[2025-06-04 09:58:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:58:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:58:42] Starting ATLAS job with PandaID=6678362683
[2025-06-04 09:58:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:25:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:25:39]  workdir=None
[2025-06-04 11:25:39] ]
[2025-06-04 11:25:39] 2025-06-04 15:25:00,072 | INFO     | transferring file log.45006595._053178.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6678362683/log.45006595._053178.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:25:39] 2025-06-04 15:25:00,073 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678362683/log.45006595._053178.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._053178.job
[2025-06-04 11:25:39] 2025-06-04 15:25:00,090 | INFO     | adding to output.list: log.45006595._053178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/f3/log.45006595._053178.job.log.tg
[2025-06-04 11:25:39] 2025-06-04 15:25:00,091 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:25:39] 2025-06-04 15:25:00,091 | INFO     | summary of transferred files:
[2025-06-04 11:25:39] 2025-06-04 15:25:00,091 | INFO     |  -- lfn=log.45006595._053178.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:25:39] 2025-06-04 15:25:00,091 | INFO     | stage-out finished correctly
[2025-06-04 11:25:39] 2025-06-04 15:25:00,657 | INFO     | monitor loop #387: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:00,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:01,894 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:25:39] 2025-06-04 15:25:01,991 | INFO     | job 6678362683 has state=finished
[2025-06-04 11:25:39] 2025-06-04 15:25:01,991 | INFO     | preparing for final server update for job 6678362683 in state='finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:01,992 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:25:39] 2025-06-04 15:25:01,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:25:39] 2025-06-04 15:25:01,992 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:25:39] 2025-06-04 15:25:01,992 | INFO     | job 6678362683 has finished - writing final server update
[2025-06-04 11:25:39] 2025-06-04 15:25:01,992 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:25:39] 2025-06-04 15:25:01,996 | INFO     | executing command: lscpu
[2025-06-04 11:25:39] 2025-06-04 15:25:02,080 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:25:39] 2025-06-04 15:25:03,160 | INFO     | monitor loop #388: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:03,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:05,663 | INFO     | monitor loop #389: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:05,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:05,766 | INFO     | PID=53706 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:25:39] 2025-06-04 15:25:05,767 | INFO     | .. there are 18 such processes running
[2025-06-04 11:25:39] 2025-06-04 15:25:08,168 | INFO     | monitor loop #390: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:08,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:10,671 | INFO     | monitor loop #391: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:10,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:13,174 | INFO     | monitor loop #392: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:13,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:15,681 | INFO     | monitor loop #393: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:15,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,185 | INFO     | monitor loop #394: job 0:6678362683 is in state 'finished'
[2025-06-04 11:25:39] 2025-06-04 15:25:18,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,380 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:25:39] 2025-06-04 15:25:18,380 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678362683/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,381 | INFO     | extracted standard info from prmon json
[2025-06-04 11:25:39] 2025-06-04 15:25:18,381 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:25:39] 2025-06-04 15:25:18,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:25:39] 2025-06-04 15:25:18,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:25:39] 2025-06-04 15:25:18,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:25:39] 2025-06-04 15:25:18,383 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:25:39] 2025-06-04 15:25:18,383 | INFO     | sum of square deviations: 136094660.98684177
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | sum of deviations: -2124864386.7236843
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | mean x: 1749048273.5131578
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | mean y: 2504733.2236842103
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | -- intersect: 27310632473.870186
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | intersect: 27310632473.870186
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | chi2: 0.040041019639368916
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | -- intersect: 27310632473.870186
[2025-06-04 11:25:39] 2025-06-04 15:25:18,384 | INFO     | current memory leak: -15.61 B/s (using 76 data points, chi2=0.04)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | ..............................
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . Timing measurements:
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . get job = 0 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . initial setup = 3 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . payload setup = 31 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . stage-in = 0 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . payload execution = 5045 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . stage-out = 1 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | . log creation = 0 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,385 | INFO     | ..............................
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | 
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | job summary report
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | --------------------------------------------------
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | PanDA job id: 6678362683
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | task id: 45006595
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | errors: (none)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:25:39] 2025-06-04 15:25:18,469 | INFO     | pilot state: finished 
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | transexitcode: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | exeerrorcode: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | exeerrordiag: 
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | exitcode: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | exitmsg: OK
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | cpuconsumptiontime: 29078 s
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | nevents: 400
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | neventsw: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | pid: 60783
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | pgrp: 60783
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | corecount: 8
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | event service: False
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | sizes: {0: 2397342, 11: 2397342, 19: 2397576, 22: 2397604, 5081: 2423728, 5083: 2432669, 5085: 2432853, 5102: 2433023}
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | --------------------------------------------------
[2025-06-04 11:25:39] 2025-06-04 15:25:18,470 | INFO     | 
[2025-06-04 11:25:39] 2025-06-04 15:25:18,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | job 6678362683 has completed (purged errors)
[2025-06-04 11:25:39] 2025-06-04 15:25:18,489 | INFO     | overall cleanup function is called
[2025-06-04 11:25:39] 2025-06-04 15:25:19,496 | INFO     | --- collectZombieJob: --- 10, [60783]
[2025-06-04 11:25:39] 2025-06-04 15:25:19,496 | INFO     | zombie collector waiting for pid 60783
[2025-06-04 11:25:39] 2025-06-04 15:25:19,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:25:39] 2025-06-04 15:25:19,496 | INFO     | collected zombie processes
[2025-06-04 11:25:39] 2025-06-04 15:25:19,496 | INFO     | will attempt to kill all subprocesses of pid=60783
[2025-06-04 11:25:39] 2025-06-04 15:25:19,781 | INFO     | process IDs to be killed: [60783] (in reverse order)
[2025-06-04 11:25:39] 2025-06-04 15:25:19,888 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:25:39] 2025-06-04 15:25:19,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:25:39] 2025-06-04 15:25:19,897 | INFO     | did not find any defunct processes belonging to 60783
[2025-06-04 11:25:39] 2025-06-04 15:25:19,904 | INFO     | did not find any defunct processes belonging to 60783
[2025-06-04 11:25:39] 2025-06-04 15:25:19,905 | INFO     | ready for new job
[2025-06-04 11:25:39] 2025-06-04 15:25:19,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:25:39] 2025-06-04 15:25:19,906 | INFO     | **************************************
[2025-06-04 11:25:39] 2025-06-04 15:25:19,906 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:25:39] 2025-06-04 15:25:19,906 | INFO     | **************************************
[2025-06-04 11:25:39] 2025-06-04 15:25:19,906 | INFO     | 
[2025-06-04 11:25:39] 2025-06-04 15:25:19,910 | INFO     | architecture information:
[2025-06-04 11:25:39] 2025-06-04 15:25:19,910 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:25:39] 2025-06-04 15:25:19,942 | INFO     | cat /etc/os-release:
[2025-06-04 11:25:39] NAME="CentOS Linux"
[2025-06-04 11:25:39] VERSION="7 (Core)"
[2025-06-04 11:25:39] ID="centos"
[2025-06-04 11:25:39] ID_LIKE="rhel fedora"
[2025-06-04 11:25:39] VERSION_ID="7"
[2025-06-04 11:25:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:25:39] ANSI_COLOR="0;31"
[2025-06-04 11:25:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:25:39] HOME_URL="https://www.centos.org/"
[2025-06-04 11:25:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:25:39] 
[2025-06-04 11:25:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:25:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:25:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:25:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:25:39] 
[2025-06-04 11:25:39] 2025-06-04 15:25:19,942 | INFO     | **************************************
[2025-06-04 11:25:39] 2025-06-04 15:25:20,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 11:25:39] 2025-06-04 15:25:20,471 | INFO     | sufficient remaining disk space (104064876544 B)
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | INFO     | update_server=False
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:25:39] 2025-06-04 15:25:20,472 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:25:39] 2025-06-04 15:25:20,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:25:39] 2025-06-04 15:25:20,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:25:39] 2025-06-04 15:25:20,561 | INFO     | all data control threads have been joined
[2025-06-04 11:25:39] 2025-06-04 15:25:20,609 | INFO     | all payload control threads have been joined
[2025-06-04 11:25:39] 2025-06-04 15:25:20,691 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:25:39] 2025-06-04 15:25:20,691 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:25:39] 2025-06-04 15:25:20,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:25:39] 2025-06-04 15:25:20,692 | INFO     | will abort loop
[2025-06-04 11:25:39] 2025-06-04 15:25:20,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:25:39] 2025-06-04 15:25:21,478 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,482 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,519 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:25:39] 2025-06-04 15:25:21,567 | INFO     | [data] control thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,615 | INFO     | [payload] control thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,696 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:21,839 | INFO     | [job] validate thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,025 | INFO     | all job control threads have been joined
[2025-06-04 11:25:39] 2025-06-04 15:25:22,346 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,346 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,351 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,384 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,697 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:22,760 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:23,031 | INFO     | [job] control thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:25,533 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:31,327 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:25:39] 2025-06-04 15:25:32,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:25:39] 2025-06-04 15:25:32,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995169392448)>', '<ExcThread(monitor, started 139994450618112)>']
[2025-06-04 11:25:39] 2025-06-04 15:25:33,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:25:39] 2025-06-04 15:25:33,560 | INFO     | [monitor] control thread has ended
[2025-06-04 11:25:39] 2025-06-04 15:25:37,950 | INFO     | all workflow threads have been joined
[2025-06-04 11:25:39] 2025-06-04 15:25:37,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:25:39] 2025-06-04 15:25:37,950 | INFO     | traces error code: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:37,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:25:39] 2025-06-04 15:25:38,444 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:25:39] 2025-06-04 15:25:38,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:25:39] 2025-06-04 15:25:38,456 [wrapper] pilotpid: 53706
[2025-06-04 11:25:39] 2025-06-04 15:25:38,461 [wrapper] Pilot exit status: 0
[2025-06-04 11:25:39] 2025-06-04 15:25:38,480 [wrapper] pandaids: 6678362683
[2025-06-04 11:25:39] 2025-06-04 15:25:38,548 [wrapper] cleanup supervisor_pilot  5390 53707
[2025-06-04 11:25:39] 2025-06-04 15:25:38,565 [wrapper] Test setup, not cleaning
[2025-06-04 11:25:39] 2025-06-04 15:25:38,569 [wrapper] apfmon messages muted
[2025-06-04 11:25:39] 2025-06-04 15:25:38,575 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:25:39] 2025-06-04 15:25:38,595 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:25:39]  *** Error codes and diagnostics ***
[2025-06-04 11:25:39]     "exeErrorCode": 0,
[2025-06-04 11:25:39]     "exeErrorDiag": "",
[2025-06-04 11:25:39]     "pilotErrorCode": 0,
[2025-06-04 11:25:39]     "pilotErrorDiag": "",
[2025-06-04 11:25:39]  *** Listing of results directory ***
[2025-06-04 11:25:39] total 397552
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:13 queuedata.json
[2025-06-04 11:25:39] -rwx------ 1 boincer umatlas     37140 Jun  4 01:14 runpilot2-wrapper.sh
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:25:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:58 run_atlas
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:58 job.xml
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas 214999925 Jun  4 09:58 EVNT.45006593._002128.pool.root.1
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:58 start_atlas.sh
[2025-06-04 11:25:39] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:58 shared
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:58 input.tar.gz
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:58 boinc_lockfile
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:58 pandaJob.out
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas    986819 Jun  4 09:59 agis_schedconf.cvmfs.json
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas   1598969 Jun  4 09:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:25:39] drwx------ 4 boincer umatlas      4096 Jun  4 09:59 pilot3
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 11:21 init_data.xml
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas 186639286 Jun  4 11:24 HITS.45006595._053178.pool.root.1
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:24 boinc_task_state.xml
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas      1071 Jun  4 11:24 memory_monitor_summary.json
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas    317739 Jun  4 11:24 log.45006595._053178.job.log.tgz.1
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas        95 Jun  4 11:25 pilot_heartbeat.json
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas      7740 Jun  4 11:25 heartbeat.json
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:25 wrapper_checkpoint.txt
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:25 boinc_mmap_file
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas      4735 Jun  4 11:25 pilotlog.txt
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas    495233 Jun  4 11:25 log.45006595._053178.job.log.1
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas       357 Jun  4 11:25 output.list
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:25 runtime_log
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas    829440 Jun  4 11:25 result.tar.gz
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas       657 Jun  4 11:25 wsEMDmxdvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSLnKDmQTzQPn.diag
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 11:25 runtime_log.err
[2025-06-04 11:25:39] -rw-r--r-- 1 boincer umatlas     22332 Jun  4 11:25 stderr.txt
[2025-06-04 11:25:39] HITS file was successfully produced:
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas 186639286 Jun  4 11:24 shared/HITS.pool.root.1
[2025-06-04 11:25:39]  *** Contents of shared directory: ***
[2025-06-04 11:25:39] total 393564
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas 214999925 Jun  4 09:58 ATLAS.root_0
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:58 start_atlas.sh
[2025-06-04 11:25:39] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:58 input.tar.gz
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas 186639286 Jun  4 11:24 HITS.pool.root.1
[2025-06-04 11:25:39] -rw------- 1 boincer umatlas    829440 Jun  4 11:25 result.tar.gz
11:25:41 (48132): run_atlas exited; CPU time 28850.206088
11:25:41 (48132): called boinc_finish(0)

</stderr_txt>
]]>

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