Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:03:24 (77032): wrapper (7.7.26015): starting
22:03:24 (77032): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:03:24] Arguments: --nthreads 12
[2025-06-04 22:03:24] Threads: 12
[2025-06-04 22:03:24] Checking for CVMFS
[2025-06-04 22:03:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:03:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:03:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:03:25] 2.13.0.0 2707212 2897 110372 146792 1 56 3480033 4097025 0 130560 0 2633889 99.994 467850 10820 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 22:03:25] CVMFS is ok
[2025-06-04 22:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:03:25] Further information can be found at the LHC@home message board.
[2025-06-04 22:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:03:25] Checking for apptainer binary...
[2025-06-04 22:03:25] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 22:03:25] apptainer is not installed, using version from CVMFS
[2025-06-04 22:03:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:03:25] pckelar7.cern.ch
[2025-06-04 22:03:25] apptainer works
[2025-06-04 22:03:25] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:03:25] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:03:25] Starting ATLAS job with PandaID=6666806594
[2025-06-04 22:03:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:29:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:29:31]  is_altstaged=None
[2025-06-04 23:29:31]  is_tar=False
[2025-06-04 23:29:31]  lfn=log.44871837._063453.job.log.tgz.1
[2025-06-04 23:29:31]  mtime=0
[2025-06-04 23:29:31]  protocol_id=None
[2025-06-04 23:29:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 23:29:31]  replicas=None
[2025-06-04 23:29:31]  scope=mc23_13p6TeV
[2025-06-04 23:29:31]  status=None
[2025-06-04 23:29:31]  status_code=0
[2025-06-04 23:29:31]  storage_token=
[2025-06-04 23:29:31]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6666806594/log.44871837._063453.job.log.tgz.1
[2025-06-04 23:29:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/0b/log.44871837._063453.job.log.tgz.1
[2025-06-04 23:29:31]  workdir=None
[2025-06-04 23:29:31] ]
[2025-06-04 23:29:31] 2025-06-04 21:29:04,957 | INFO     | transferring file log.44871837._063453.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6666806594/log.44871837._063453.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 23:29:31] 2025-06-04 21:29:04,958 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6666806594/log.44871837._063453.job.log.tgz.1 /var/lib/boinc/slots/0/log.44871837._063453.job
[2025-06-04 23:29:31] 2025-06-04 21:29:04,972 | INFO     | adding to output.list: log.44871837._063453.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/0b/log.44871837._063453.job.log.tg
[2025-06-04 23:29:31] 2025-06-04 21:29:04,972 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 23:29:31] 2025-06-04 21:29:04,973 | INFO     | summary of transferred files:
[2025-06-04 23:29:31] 2025-06-04 21:29:04,973 | INFO     |  -- lfn=log.44871837._063453.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 23:29:31] 2025-06-04 21:29:04,973 | INFO     | stage-out finished correctly
[2025-06-04 23:29:31] 2025-06-04 21:29:05,051 | INFO     | number of running child processes to parent process 87811: 1
[2025-06-04 23:29:31] 2025-06-04 21:29:05,052 | INFO     | maximum number of monitored processes: 6
[2025-06-04 23:29:31] 2025-06-04 21:29:06,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 23:29:31] 2025-06-04 21:29:07,555 | INFO     | monitor loop #390: job 0:6666806594 is in state 'finished'
[2025-06-04 23:29:31] 2025-06-04 21:29:07,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:29:31] 2025-06-04 21:29:08,455 | INFO     | job 6666806594 has state=finished
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | preparing for final server update for job 6666806594 in state='finished'
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | this job has now completed (state=finished)
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | log transfer has been attempted: DONE
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | job 6666806594 has finished - writing final server update
[2025-06-04 23:29:31] 2025-06-04 21:29:08,456 | INFO     | total number of processed events: 400 (read)
[2025-06-04 23:29:31] 2025-06-04 21:29:08,458 | INFO     | executing command: lscpu
[2025-06-04 23:29:31] 2025-06-04 21:29:08,478 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:29:31] 2025-06-04 21:29:10,057 | INFO     | monitor loop #391: job 0:6666806594 is in state 'finished'
[2025-06-04 23:29:31] 2025-06-04 21:29:10,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:29:31] 2025-06-04 21:29:11,070 | INFO     | PID=80694 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,262 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 23:29:31] 2025-06-04 21:29:12,262 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6666806594/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:29:31] 2025-06-04 21:29:12,263 | INFO     | extracted standard info from prmon json
[2025-06-04 23:29:31] 2025-06-04 21:29:12,263 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:29:31] 2025-06-04 21:29:12,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:29:31] 2025-06-04 21:29:12,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:29:31] 2025-06-04 21:29:12,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | sum of deviations: -6153858851.999999
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | mean x: 1749070057.0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | mean y: 2793615.8181818184
[2025-06-04 23:29:31] 2025-06-04 21:29:12,265 | INFO     | -- intersect: 76048971606.75179
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | intersect: 76048971606.75179
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | chi2: 0.09392152570830618
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | -- intersect: 76048971606.75179
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | current memory leak: -43.48 B/s (using 77 data points, chi2=0.09)
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | ..............................
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | . Timing measurements:
[2025-06-04 23:29:31] 2025-06-04 21:29:12,266 | INFO     | . get job = 0 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . initial setup = 1 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . payload setup = 5 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . stage-in = 0 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . payload execution = 5109 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . stage-out = 0 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | . log creation = 0 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,267 | INFO     | ..............................
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | job summary report
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | --------------------------------------------------
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | PanDA job id: 6666806594
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | task id: 44871837
[2025-06-04 23:29:31] 2025-06-04 21:29:12,336 | INFO     | errors: (none)
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | pilot state: finished 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | transexitcode: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | exeerrorcode: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | exeerrordiag: 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | exitcode: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | exitmsg: OK
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | cpuconsumptiontime: 55435 s
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | nevents: 400
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | neventsw: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | pid: 87811
[2025-06-04 23:29:31] 2025-06-04 21:29:12,337 | INFO     | pgrp: 87811
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | corecount: 12
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | event service: False
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | sizes: {0: 2397165, 1: 2397420, 4: 2397626, 11: 2397654, 5118: 2423962, 5120: 2432903, 5121: 2433087, 5127: 2433257}
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | --------------------------------------------------
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | 
[2025-06-04 23:29:31] 2025-06-04 21:29:12,338 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | job 6666806594 has completed (purged errors)
[2025-06-04 23:29:31] 2025-06-04 21:29:12,357 | INFO     | overall cleanup function is called
[2025-06-04 23:29:31] 2025-06-04 21:29:13,365 | INFO     | --- collectZombieJob: --- 10, [87811]
[2025-06-04 23:29:31] 2025-06-04 21:29:13,365 | INFO     | zombie collector waiting for pid 87811
[2025-06-04 23:29:31] 2025-06-04 21:29:13,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:29:31] 2025-06-04 21:29:13,365 | INFO     | collected zombie processes
[2025-06-04 23:29:31] 2025-06-04 21:29:13,365 | INFO     | will attempt to kill all subprocesses of pid=87811
[2025-06-04 23:29:31] 2025-06-04 21:29:13,439 | INFO     | process IDs to be killed: [87811] (in reverse order)
[2025-06-04 23:29:31] 2025-06-04 21:29:13,474 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:29:31] 2025-06-04 21:29:13,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:29:31] 2025-06-04 21:29:13,476 | INFO     | did not find any defunct processes belonging to 87811
[2025-06-04 23:29:31] 2025-06-04 21:29:13,478 | INFO     | did not find any defunct processes belonging to 87811
[2025-06-04 23:29:31] 2025-06-04 21:29:13,479 | INFO     | ready for new job
[2025-06-04 23:29:31] 2025-06-04 21:29:13,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:29:31] 2025-06-04 21:29:13,480 | INFO     | **************************************
[2025-06-04 23:29:31] 2025-06-04 21:29:13,480 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:29:31] 2025-06-04 21:29:13,480 | INFO     | **************************************
[2025-06-04 23:29:31] 2025-06-04 21:29:13,480 | INFO     | 
[2025-06-04 23:29:31] 2025-06-04 21:29:13,481 | INFO     | architecture information:
[2025-06-04 23:29:31] 2025-06-04 21:29:13,481 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:29:31] 2025-06-04 21:29:13,493 | INFO     | cat /etc/os-release:
[2025-06-04 23:29:31] NAME="CentOS Linux"
[2025-06-04 23:29:31] VERSION="7 (Core)"
[2025-06-04 23:29:31] ID="centos"
[2025-06-04 23:29:31] ID_LIKE="rhel fedora"
[2025-06-04 23:29:31] VERSION_ID="7"
[2025-06-04 23:29:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:29:31] ANSI_COLOR="0;31"
[2025-06-04 23:29:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:29:31] HOME_URL="https://www.centos.org/"
[2025-06-04 23:29:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:29:31] 
[2025-06-04 23:29:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:29:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:29:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:29:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:29:31] 
[2025-06-04 23:29:31] 2025-06-04 21:29:13,493 | INFO     | **************************************
[2025-06-04 23:29:31] 2025-06-04 21:29:13,996 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | INFO     | sufficient remaining disk space (1790066032640 B)
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | INFO     | update_server=False
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:29:31] 2025-06-04 21:29:14,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:29:31] 2025-06-04 21:29:14,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:29:31] 2025-06-04 21:29:14,009 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:29:31] 2025-06-04 21:29:14,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:29:31] 2025-06-04 21:29:14,009 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:29:31] 2025-06-04 21:29:14,010 | INFO     | aborting loop
[2025-06-04 23:29:31] 2025-06-04 21:29:14,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:29:31] 2025-06-04 21:29:14,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:29:31] 2025-06-04 21:29:14,221 | INFO     | all job control threads have been joined
[2025-06-04 23:29:31] 2025-06-04 21:29:14,531 | INFO     | all data control threads have been joined
[2025-06-04 23:29:31] 2025-06-04 21:29:14,868 | INFO     | all payload control threads have been joined
[2025-06-04 23:29:31] 2025-06-04 21:29:15,014 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,014 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,015 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,227 | INFO     | [job] control thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,537 | INFO     | [data] control thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,681 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:15,873 | INFO     | [payload] control thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,014 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,055 | INFO     | [job] validate thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,124 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,328 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,333 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,429 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,432 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:16,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:29:31] 2025-06-04 21:29:20,869 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:24,199 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:29:31] 2025-06-04 21:29:25,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:29:31] 2025-06-04 21:29:26,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882823288640)>', '<ExcThread(monitor, started 139881892267776)>']
[2025-06-04 23:29:31] 2025-06-04 21:29:27,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:29:31] 2025-06-04 21:29:27,076 | INFO     | [monitor] control thread has ended
[2025-06-04 23:29:31] 2025-06-04 21:29:31,371 | INFO     | all workflow threads have been joined
[2025-06-04 23:29:31] 2025-06-04 21:29:31,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:29:31] 2025-06-04 21:29:31,372 | INFO     | traces error code: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:31,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:29:31] 2025-06-04 21:29:31,463 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:29:31] 2025-06-04 21:29:31,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:29:31] 2025-06-04 21:29:31,468 [wrapper] pilotpid: 80694
[2025-06-04 23:29:31] 2025-06-04 21:29:31,469 [wrapper] Pilot exit status: 0
[2025-06-04 23:29:31] 2025-06-04 21:29:31,476 [wrapper] pandaids: 6666806594
[2025-06-04 23:29:31] 2025-06-04 21:29:31,496 [wrapper] cleanup supervisor_pilot  110482 80695
[2025-06-04 23:29:31] 2025-06-04 21:29:31,498 [wrapper] Test setup, not cleaning
[2025-06-04 23:29:31] 2025-06-04 21:29:31,499 [wrapper] apfmon messages muted
[2025-06-04 23:29:31] 2025-06-04 21:29:31,501 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:29:31] 2025-06-04 21:29:31,502 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:29:31]  *** Error codes and diagnostics ***
[2025-06-04 23:29:31]     "exeErrorCode": 0,
[2025-06-04 23:29:31]     "exeErrorDiag": "",
[2025-06-04 23:29:31]     "pilotErrorCode": 0,
[2025-06-04 23:29:31]     "pilotErrorDiag": "",
[2025-06-04 23:29:31]  *** Listing of results directory ***
[2025-06-04 23:29:31] total 413428
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc    495897 May 27 08:07 pilot3.tar.gz
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc      5111 May 27 08:19 queuedata.json
[2025-06-04 23:29:31] -rwx------. 1 boinc boinc     37140 May 27 08:22 runpilot2-wrapper.sh
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc       100 Jun  4 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:29:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 22:03 run_atlas
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc       105 Jun  4 22:03 job.xml
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc      6209 Jun  4 22:03 init_data.xml
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc 223299531 Jun  4 22:03 EVNT.44871834._002502.pool.root.1
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:03 start_atlas.sh
[2025-06-04 23:29:31] drwxrwx--x. 2 boinc boinc      4096 Jun  4 22:03 shared
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc    508879 Jun  4 22:03 input.tar.gz
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc         0 Jun  4 22:03 boinc_lockfile
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc      2559 Jun  4 22:03 pandaJob.out
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc    991007 Jun  4 22:03 agis_schedconf.cvmfs.json
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc   1598969 Jun  4 22:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:29:31] drwx------. 4 boinc boinc      4096 Jun  4 22:03 pilot3
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc 194491197 Jun  4 23:28 HITS.44871837._063453.pool.root.1
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc       529 Jun  4 23:28 boinc_task_state.xml
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc      1028 Jun  4 23:29 memory_monitor_summary.json
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc    371707 Jun  4 23:29 log.44871837._063453.job.log.tgz.1
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc        95 Jun  4 23:29 pilot_heartbeat.json
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc      7683 Jun  4 23:29 heartbeat.json
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc        27 Jun  4 23:29 wrapper_checkpoint.txt
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:29 boinc_mmap_file
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc      4550 Jun  4 23:29 pilotlog.txt
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc    490878 Jun  4 23:29 log.44871837._063453.job.log.1
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc       357 Jun  4 23:29 output.list
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:29 runtime_log
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc    880640 Jun  4 23:29 result.tar.gz
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc      8683 Jun  4 23:29 runtime_log.err
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc       656 Jun  4 23:29 aG4KDmqs2d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJkYKDmgO8fgm.diag
[2025-06-04 23:29:31] -rw-r--r--. 1 boinc boinc     21560 Jun  4 23:29 stderr.txt
[2025-06-04 23:29:31] HITS file was successfully produced:
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc 194491197 Jun  4 23:28 shared/HITS.pool.root.1
[2025-06-04 23:29:31]  *** Contents of shared directory: ***
[2025-06-04 23:29:31] total 409388
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc 223299531 Jun  4 22:03 ATLAS.root_0
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 22:03 start_atlas.sh
[2025-06-04 23:29:31] -rw-r--r--. 2 boinc boinc    508879 Jun  4 22:03 input.tar.gz
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc 194491197 Jun  4 23:28 HITS.pool.root.1
[2025-06-04 23:29:31] -rw-------. 1 boinc boinc    880640 Jun  4 23:29 result.tar.gz
23:29:33 (77032): run_atlas exited; CPU time 55465.359054
23:29:33 (77032): called boinc_finish(0)

</stderr_txt>
]]>

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