Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:51 (976362): wrapper (7.7.26015): starting
06:45:51 (976362): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:45:51] Arguments: --nthreads 12
[2025-06-04 06:45:51] Threads: 12
[2025-06-04 06:45:51] Checking for CVMFS
[2025-06-04 06:45:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:45:51] 2.11.3.0 1160475 23753 227248 146781 3 779 39543448 45568001 15483 130560 0 288058348 99.821 157936196 30154 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 06:45:51] CVMFS is ok
[2025-06-04 06:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:45:51] Further information can be found at the LHC@home message board.
[2025-06-04 06:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:45:51] Checking for apptainer binary...
[2025-06-04 06:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:45:51] Running /usr/bin/apptainer --version
[2025-06-04 06:45:51] apptainer version 1.3.3-1.el9
[2025-06-04 06:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:45:51] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0170.triumf.lcg
[2025-06-04 06:45:51] apptainer works
[2025-06-04 06:45:51] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:45:51] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:45:51] Starting ATLAS job with PandaID=6679695758
[2025-06-04 06:45:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:49:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | found no stored workdir sizes
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | wrong length of table data, x=[1749044799.0], y=[1850.0] (must be same and length>=4)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . Timing measurements:
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . get job = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . initial setup = 3 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload setup = 6 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-in = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload execution = 24 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-out = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . log creation = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679695758/pilotlog.txt
[2025-06-04 06:49:15] 2025-06-04 13:49:02,226 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 06:49:15] - Log from pilotlog.txt -
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | INFO     | extracted standard info from prmon json
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | found no stored workdir sizes
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | wrong length of table data, x=[1749044799.0], y=[1850.0] (must be same and length>=4)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . Timing measurements:
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . get job = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . initial setup = 3 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload setup = 6 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-in = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload execution = 24 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-out = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . log creation = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679695758/pilotlog.txt
[2025-06-04 06:49:15] 2025-06-04 13:49:02,226 | WARNING  | 
[2025-06-04 06:49:15] [begin log extracts]
[2025-06-04 06:49:15] - Log from pilotlog.txt -
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | INFO     | extracted standard info from prmon json
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:49:15] 2025-06-04 13:49:02,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | found no stored workdir sizes
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | WARNING  | wrong length of table data, x=[1749044799.0], y=[1850.0] (must be same and length>=4)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . Timing measurements:
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . get job = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,216 | INFO     | . initial setup = 3 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload setup = 6 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-in = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . payload execution = 24 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . stage-out = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | . log creation = 0 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | ..............................
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 06:49:15] 2025-06-04 13:49:02,217 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6679695758/pilotlog.txt
[2025-06-04 06:49:15] [end log extracts]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,226 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,227 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 06:49:15] 2025-06-04 13:49:02,279 | INFO     | 
[2025-06-04 06:49:15] 2025-06-04 13:49:02,279 | INFO     | job summary report
[2025-06-04 06:49:15] 2025-06-04 13:49:02,279 | INFO     | --------------------------------------------------
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | PanDA job id: 6679695758
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | task id: 45006595
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 06:46:49,174 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | pilot state: failed 
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | transexitcode: 65
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | exeerrorcode: 65
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | exitcode: 65
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | cpuconsumptiontime: 12 s
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | nevents: 0
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | neventsw: 0
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | pid: 988575
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | pgrp: 988575
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | corecount: 12
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | event service: False
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | sizes: {0: 2397117, 1: 2397316, 5: 2397522, 11: 2397578, 35: 2420698, 37: 2425089, 157: 2425203}
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | --------------------------------------------------
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | 
[2025-06-04 06:49:15] 2025-06-04 13:49:02,280 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | job 6679695758 has completed (purged errors)
[2025-06-04 06:49:15] 2025-06-04 13:49:02,294 | INFO     | overall cleanup function is called
[2025-06-04 06:49:15] 2025-06-04 13:49:03,301 | INFO     | --- collectZombieJob: --- 10, [988575]
[2025-06-04 06:49:15] 2025-06-04 13:49:03,301 | INFO     | zombie collector waiting for pid 988575
[2025-06-04 06:49:15] 2025-06-04 13:49:03,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:49:15] 2025-06-04 13:49:03,301 | INFO     | collected zombie processes
[2025-06-04 06:49:15] 2025-06-04 13:49:03,301 | INFO     | will attempt to kill all subprocesses of pid=988575
[2025-06-04 06:49:15] 2025-06-04 13:49:03,879 | INFO     | process IDs to be killed: [988575] (in reverse order)
[2025-06-04 06:49:15] 2025-06-04 13:49:03,981 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:49:15] 2025-06-04 13:49:03,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:49:15] 2025-06-04 13:49:03,992 | INFO     | did not find any defunct processes belonging to 988575
[2025-06-04 06:49:15] 2025-06-04 13:49:03,999 | INFO     | did not find any defunct processes belonging to 988575
[2025-06-04 06:49:15] 2025-06-04 13:49:03,999 | INFO     | ready for new job
[2025-06-04 06:49:15] 2025-06-04 13:49:03,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:49:15] 2025-06-04 13:49:04,000 | INFO     | **************************************
[2025-06-04 06:49:15] 2025-06-04 13:49:04,000 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:49:15] 2025-06-04 13:49:04,001 | INFO     | **************************************
[2025-06-04 06:49:15] 2025-06-04 13:49:04,001 | INFO     | 
[2025-06-04 06:49:15] 2025-06-04 13:49:04,014 | INFO     | architecture information:
[2025-06-04 06:49:15] 2025-06-04 13:49:04,018 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:49:15] 2025-06-04 13:49:04,072 | INFO     | cat /etc/os-release:
[2025-06-04 06:49:15] NAME="CentOS Linux"
[2025-06-04 06:49:15] VERSION="7 (Core)"
[2025-06-04 06:49:15] ID="centos"
[2025-06-04 06:49:15] ID_LIKE="rhel fedora"
[2025-06-04 06:49:15] VERSION_ID="7"
[2025-06-04 06:49:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:49:15] ANSI_COLOR="0;31"
[2025-06-04 06:49:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:49:15] HOME_URL="https://www.centos.org/"
[2025-06-04 06:49:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:49:15] 
[2025-06-04 06:49:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:49:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:49:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:49:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:49:15] 
[2025-06-04 06:49:15] 2025-06-04 13:49:04,072 | INFO     | **************************************
[2025-06-04 06:49:15] 2025-06-04 13:49:04,576 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | INFO     | sufficient remaining disk space (2361369034752 B)
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | INFO     | update_server=False
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:49:15] 2025-06-04 13:49:04,711 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:49:15] 2025-06-04 13:49:04,712 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:49:15] 2025-06-04 13:49:04,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:49:15] 2025-06-04 13:49:04,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:49:15] 2025-06-04 13:49:04,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:49:15] 2025-06-04 13:49:04,712 | INFO     | aborting loop
[2025-06-04 06:49:15] 2025-06-04 13:49:04,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:49:15] 2025-06-04 13:49:04,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:49:15] 2025-06-04 13:49:05,311 | INFO     | all job control threads have been joined
[2025-06-04 06:49:15] 2025-06-04 13:49:05,530 | INFO     | all data control threads have been joined
[2025-06-04 06:49:15] 2025-06-04 13:49:05,717 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:05,717 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:05,903 | INFO     | [job] validate thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:05,929 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:05,934 | INFO     | all payload control threads have been joined
[2025-06-04 06:49:15] 2025-06-04 13:49:06,104 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,158 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,316 | INFO     | [job] control thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,363 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,536 | INFO     | [data] control thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,873 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:06,940 | INFO     | [payload] control thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:07,125 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:07,133 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:07,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:49:15] 2025-06-04 13:49:08,299 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:08,904 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:49:15] 2025-06-04 13:49:09,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707614664512)>', '<ExcThread(monitor, started 139707090462464)>']
[2025-06-04 06:49:15] 2025-06-04 13:49:09,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:49:15] 2025-06-04 13:49:09,742 | INFO     | [monitor] control thread has ended
[2025-06-04 06:49:15] 2025-06-04 13:49:14,685 | INFO     | all workflow threads have been joined
[2025-06-04 06:49:15] 2025-06-04 13:49:14,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:49:15] 2025-06-04 13:49:14,685 | INFO     | traces error code: 0
[2025-06-04 06:49:15] 2025-06-04 13:49:14,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:49:15] 2025-06-04 13:49:14,920 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:49:15] 2025-06-04 13:49:14,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:49:15] 2025-06-04 13:49:14,924 [wrapper] pilotpid: 982228
[2025-06-04 06:49:15] 2025-06-04 13:49:14,926 [wrapper] Pilot exit status: 0
[2025-06-04 06:49:15] 2025-06-04 13:49:14,956 [wrapper] pandaids: 6679695758
[2025-06-04 06:49:15] 2025-06-04 13:49:15,035 [wrapper] cleanup supervisor_pilot  982234 982229
[2025-06-04 06:49:15] 2025-06-04 13:49:15,037 [wrapper] Test setup, not cleaning
[2025-06-04 06:49:15] 2025-06-04 13:49:15,054 [wrapper] apfmon messages muted
[2025-06-04 06:49:15] 2025-06-04 13:49:15,056 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:49:15] 2025-06-04 13:49:15,065 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:49:15]  *** Error codes and diagnostics ***
[2025-06-04 06:49:15]     "exeErrorCode": 65,
[2025-06-04 06:49:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 06:49:15]     "pilotErrorCode": 1305,
[2025-06-04 06:49:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 06:49:15]  *** Listing of results directory ***
[2025-06-04 06:49:15] total 213768
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:39 pilot3.tar.gz
[2025-06-04 06:49:15] -rwx------. 1 boinc boinc     37140 Jun  4 05:43 runpilot2-wrapper.sh
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:43 queuedata.json
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:49:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:45 run_atlas
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:45 job.xml
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      6617 Jun  4 06:45 init_data.xml
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc 214901552 Jun  4 06:45 EVNT.45006593._001576.pool.root.1
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:45 start_atlas.sh
[2025-06-04 06:49:15] drwxrwx--x. 2 boinc boinc      4096 Jun  4 06:45 shared
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc    508876 Jun  4 06:45 input.tar.gz
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:45 boinc_lockfile
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      2524 Jun  4 06:45 pandaJob.out
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc    986819 Jun  4 06:46 agis_schedconf.cvmfs.json
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc   1598969 Jun  4 06:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:49:15] drwx------. 4 boinc boinc      4096 Jun  4 06:46 pilot3
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc       951 Jun  4 06:46 memory_monitor_summary.json
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc       522 Jun  4 06:46 boinc_task_state.xml
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc     20402 Jun  4 06:47 log.45006595._056635.job.log.tgz.1
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc        95 Jun  4 06:48 pilot_heartbeat.json
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc      8318 Jun  4 06:49 heartbeat.json
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:49 boinc_mmap_file
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc        22 Jun  4 06:49 wrapper_checkpoint.txt
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc      4475 Jun  4 06:49 pilotlog.txt
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc     73570 Jun  4 06:49 log.45006595._056635.job.log.1
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc       188 Jun  4 06:49 output.list
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:49 runtime_log
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc    112640 Jun  4 06:49 result.tar.gz
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc       645 Jun  4 06:49 yqGLDmad2g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxynKDmApzp4m.diag
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      8649 Jun  4 06:49 runtime_log.err
[2025-06-04 06:49:15] -rw-r--r--. 1 boinc boinc      2306 Jun  4 06:49 stderr.txt
[2025-06-04 06:49:15] No HITS result produced
[2025-06-04 06:49:15]  *** Contents of shared directory: ***
[2025-06-04 06:49:15] total 210500
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc 214901552 Jun  4 06:45 ATLAS.root_0
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:45 start_atlas.sh
[2025-06-04 06:49:15] -rw-r--r--. 2 boinc boinc    508876 Jun  4 06:45 input.tar.gz
[2025-06-04 06:49:15] -rw-------. 1 boinc boinc    112640 Jun  4 06:49 result.tar.gz
06:49:16 (976362): run_atlas exited; CPU time 18.003290
06:49:16 (976362): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN