Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:45:48 (91869): wrapper (7.7.26015): starting
09:45:48 (91869): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:45:48] Arguments: --nthreads 8
[2025-06-04 09:45:48] Threads: 8
[2025-06-04 09:45:48] Checking for CVMFS
[2025-06-04 09:45:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:45:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:45:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:45:48] 2.11.2.0 10304 12725 324812 146781 2 436 17599392 18432000 17389 130560 0 109469300 99.328 146200348 50383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:45:48] CVMFS is ok
[2025-06-04 09:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:45:48] Further information can be found at the LHC@home message board.
[2025-06-04 09:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:45:48] Checking for apptainer binary...
[2025-06-04 09:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:45:48] Running /usr/bin/apptainer --version
[2025-06-04 09:45:48] apptainer version 1.3.2-1.el7
[2025-06-04 09:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:45:49] c-212-11.aglt2.org
[2025-06-04 09:45:49] apptainer works
[2025-06-04 09:45:49] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:45:49] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:45:49] Starting ATLAS job with PandaID=6666806548
[2025-06-04 09:45:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:24:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:24:37]  lfn=log.44871837._063407.job.log.tgz.1
[2025-06-04 11:24:37]  mtime=0
[2025-06-04 11:24:37]  protocol_id=None
[2025-06-04 11:24:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:24:37]  replicas=None
[2025-06-04 11:24:37]  scope=mc23_13p6TeV
[2025-06-04 11:24:37]  status=None
[2025-06-04 11:24:37]  status_code=0
[2025-06-04 11:24:37]  storage_token=
[2025-06-04 11:24:37]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6666806548/log.44871837._063407.job.log.tgz.1
[2025-06-04 11:24:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/35/log.44871837._063407.job.log.tgz.1
[2025-06-04 11:24:37]  workdir=None
[2025-06-04 11:24:37] ]
[2025-06-04 11:24:37] 2025-06-04 15:24:09,642 | INFO     | transferring file log.44871837._063407.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6666806548/log.44871837._063407.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:24:37] 2025-06-04 15:24:09,642 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6666806548/log.44871837._063407.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._063407.job
[2025-06-04 11:24:37] 2025-06-04 15:24:09,659 | INFO     | adding to output.list: log.44871837._063407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/35/log.44871837._063407.job.log.tg
[2025-06-04 11:24:37] 2025-06-04 15:24:09,660 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:24:37] 2025-06-04 15:24:09,660 | INFO     | summary of transferred files:
[2025-06-04 11:24:37] 2025-06-04 15:24:09,660 | INFO     |  -- lfn=log.44871837._063407.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:24:37] 2025-06-04 15:24:09,660 | INFO     | stage-out finished correctly
[2025-06-04 11:24:37] 2025-06-04 15:24:11,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:24:37] 2025-06-04 15:24:11,800 | INFO     | job 6666806548 has state=finished
[2025-06-04 11:24:37] 2025-06-04 15:24:11,800 | INFO     | preparing for final server update for job 6666806548 in state='finished'
[2025-06-04 11:24:37] 2025-06-04 15:24:11,800 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:24:37] 2025-06-04 15:24:11,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:24:37] 2025-06-04 15:24:11,800 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:24:37] 2025-06-04 15:24:11,801 | INFO     | job 6666806548 has finished - writing final server update
[2025-06-04 11:24:37] 2025-06-04 15:24:11,801 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:24:37] 2025-06-04 15:24:11,805 | INFO     | executing command: lscpu
[2025-06-04 11:24:37] 2025-06-04 15:24:11,848 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:24:37] 2025-06-04 15:24:11,983 | INFO     | monitor loop #437: job 0:6666806548 is in state 'finished'
[2025-06-04 11:24:37] 2025-06-04 15:24:11,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:37] 2025-06-04 15:24:14,486 | INFO     | monitor loop #438: job 0:6666806548 is in state 'finished'
[2025-06-04 11:24:37] 2025-06-04 15:24:14,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:37] 2025-06-04 15:24:16,990 | INFO     | monitor loop #439: job 0:6666806548 is in state 'finished'
[2025-06-04 11:24:37] 2025-06-04 15:24:16,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,108 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:24:37] 2025-06-04 15:24:17,108 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666806548/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,109 | INFO     | extracted standard info from prmon json
[2025-06-04 11:24:37] 2025-06-04 15:24:17,109 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:24:37] 2025-06-04 15:24:17,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:24:37] 2025-06-04 15:24:17,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:24:37] 2025-06-04 15:24:17,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | sum of square deviations: 218571540.0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | sum of deviations: -1541076916.0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | mean x: 1749047788.0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | mean y: 2515918.011235955
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | -- intersect: 12334483616.402628
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | intersect: 12334483616.402628
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | chi2: 0.005547301387168337
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | -- intersect: 12334483616.402628
[2025-06-04 11:24:37] 2025-06-04 15:24:17,111 | INFO     | current memory leak: -7.05 B/s (using 89 data points, chi2=0.01)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | ..............................
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . Timing measurements:
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . get job = 0 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . initial setup = 2 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . payload setup = 9 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . stage-in = 0 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . payload execution = 5852 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . stage-out = 1 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | . log creation = 0 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,112 | INFO     | ..............................
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | 
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | job summary report
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | --------------------------------------------------
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | PanDA job id: 6666806548
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | task id: 44871837
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | errors: (none)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | pilot state: finished 
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | transexitcode: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | exeerrorcode: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | exeerrordiag: 
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | exitcode: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | exitmsg: OK
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | cpuconsumptiontime: 40144 s
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | nevents: 400
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | neventsw: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:17,150 | INFO     | pid: 17623
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | pgrp: 17623
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | corecount: 8
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | event service: False
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 5865: 2424335, 5867: 2433276, 5869: 2433460, 5874: 2433630}
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | --------------------------------------------------
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | 
[2025-06-04 11:24:37] 2025-06-04 15:24:17,151 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 11:24:37] 2025-06-04 15:24:17,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | job 6666806548 has completed (purged errors)
[2025-06-04 11:24:37] 2025-06-04 15:24:17,251 | INFO     | overall cleanup function is called
[2025-06-04 11:24:37] 2025-06-04 15:24:17,566 | INFO     | PID=1130 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 11:24:37] 2025-06-04 15:24:17,566 | INFO     | .. there are 24 such processes running
[2025-06-04 11:24:37] 2025-06-04 15:24:18,258 | INFO     | --- collectZombieJob: --- 10, [17623]
[2025-06-04 11:24:37] 2025-06-04 15:24:18,258 | INFO     | zombie collector waiting for pid 17623
[2025-06-04 11:24:37] 2025-06-04 15:24:18,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:24:37] 2025-06-04 15:24:18,258 | INFO     | collected zombie processes
[2025-06-04 11:24:37] 2025-06-04 15:24:18,258 | INFO     | will attempt to kill all subprocesses of pid=17623
[2025-06-04 11:24:37] 2025-06-04 15:24:18,444 | INFO     | process IDs to be killed: [17623] (in reverse order)
[2025-06-04 11:24:37] 2025-06-04 15:24:18,552 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:24:37] 2025-06-04 15:24:18,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:24:37] 2025-06-04 15:24:18,561 | INFO     | did not find any defunct processes belonging to 17623
[2025-06-04 11:24:37] 2025-06-04 15:24:18,569 | INFO     | did not find any defunct processes belonging to 17623
[2025-06-04 11:24:37] 2025-06-04 15:24:18,569 | INFO     | ready for new job
[2025-06-04 11:24:37] 2025-06-04 15:24:18,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:24:37] 2025-06-04 15:24:18,571 | INFO     | **************************************
[2025-06-04 11:24:37] 2025-06-04 15:24:18,571 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:24:37] 2025-06-04 15:24:18,571 | INFO     | **************************************
[2025-06-04 11:24:37] 2025-06-04 15:24:18,571 | INFO     | 
[2025-06-04 11:24:37] 2025-06-04 15:24:18,575 | INFO     | architecture information:
[2025-06-04 11:24:37] 2025-06-04 15:24:18,575 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:24:37] 2025-06-04 15:24:18,639 | INFO     | cat /etc/os-release:
[2025-06-04 11:24:37] NAME="CentOS Linux"
[2025-06-04 11:24:37] VERSION="7 (Core)"
[2025-06-04 11:24:37] ID="centos"
[2025-06-04 11:24:37] ID_LIKE="rhel fedora"
[2025-06-04 11:24:37] VERSION_ID="7"
[2025-06-04 11:24:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:24:37] ANSI_COLOR="0;31"
[2025-06-04 11:24:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:24:37] HOME_URL="https://www.centos.org/"
[2025-06-04 11:24:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:24:37] 
[2025-06-04 11:24:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:24:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:24:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:24:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:24:37] 
[2025-06-04 11:24:37] 2025-06-04 15:24:18,639 | INFO     | **************************************
[2025-06-04 11:24:37] 2025-06-04 15:24:19,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 11:24:37] 2025-06-04 15:24:19,158 | INFO     | sufficient remaining disk space (104493744128 B)
[2025-06-04 11:24:37] 2025-06-04 15:24:19,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:24:37] 2025-06-04 15:24:19,158 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:24:37] 2025-06-04 15:24:19,158 | INFO     | update_server=False
[2025-06-04 11:24:37] 2025-06-04 15:24:19,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:24:37] 2025-06-04 15:24:19,446 | INFO     | all payload control threads have been joined
[2025-06-04 11:24:37] 2025-06-04 15:24:19,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:24:37] 2025-06-04 15:24:19,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:24:37] 2025-06-04 15:24:19,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:24:37] 2025-06-04 15:24:19,494 | INFO     | will abort loop
[2025-06-04 11:24:37] 2025-06-04 15:24:19,572 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:24:37] 2025-06-04 15:24:19,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:24:37] 2025-06-04 15:24:19,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:24:37] 2025-06-04 15:24:19,799 | INFO     | all job control threads have been joined
[2025-06-04 11:24:37] 2025-06-04 15:24:20,159 | INFO     | all data control threads have been joined
[2025-06-04 11:24:37] 2025-06-04 15:24:20,163 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,165 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:24:37] 2025-06-04 15:24:20,451 | INFO     | [payload] control thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,500 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,501 | INFO     | [job] validate thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,717 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,780 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,804 | INFO     | [job] control thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:20,844 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:21,164 | INFO     | [data] control thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:21,308 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:21,429 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:22,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:24:37] 2025-06-04 15:24:22,255 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:22,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:24:37] 2025-06-04 15:24:23,165 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:26,316 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:30,100 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:24:37] 2025-06-04 15:24:31,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:24:37] 2025-06-04 15:24:32,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649199511360)>', '<ExcThread(monitor, started 140648619431680)>']
[2025-06-04 11:24:37] 2025-06-04 15:24:32,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:24:37] 2025-06-04 15:24:32,641 | INFO     | [monitor] control thread has ended
[2025-06-04 11:24:37] 2025-06-04 15:24:37,281 | INFO     | all workflow threads have been joined
[2025-06-04 11:24:37] 2025-06-04 15:24:37,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:24:37] 2025-06-04 15:24:37,282 | INFO     | traces error code: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:37,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:24:37] 2025-06-04 15:24:37,401 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:24:37] 2025-06-04 15:24:37,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:24:37] 2025-06-04 15:24:37,405 [wrapper] pilotpid: 1130
[2025-06-04 11:24:37] 2025-06-04 15:24:37,410 [wrapper] Pilot exit status: 0
[2025-06-04 11:24:37] 2025-06-04 15:24:37,449 [wrapper] pandaids: 6666806548
[2025-06-04 11:24:37] 2025-06-04 15:24:37,513 [wrapper] cleanup supervisor_pilot 98139 1131
[2025-06-04 11:24:37] 2025-06-04 15:24:37,518 [wrapper] Test setup, not cleaning
[2025-06-04 11:24:37] 2025-06-04 15:24:37,520 [wrapper] apfmon messages muted
[2025-06-04 11:24:37] 2025-06-04 15:24:37,522 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:24:37] 2025-06-04 15:24:37,525 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:24:37]  *** Error codes and diagnostics ***
[2025-06-04 11:24:37]     "exeErrorCode": 0,
[2025-06-04 11:24:37]     "exeErrorDiag": "",
[2025-06-04 11:24:37]     "pilotErrorCode": 0,
[2025-06-04 11:24:37]     "pilotErrorDiag": "",
[2025-06-04 11:24:37]  *** Listing of results directory ***
[2025-06-04 11:24:37] total 415272
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas    495897 May 27 02:07 pilot3.tar.gz
[2025-06-04 11:24:37] -rwx------ 1 boincer umatlas     37140 May 27 02:24 runpilot2-wrapper.sh
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas      5111 May 27 02:24 queuedata.json
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:24:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:45 run_atlas
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:45 job.xml
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas 221501114 Jun  4 09:45 EVNT.44871834._002500.pool.root.1
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:45 start_atlas.sh
[2025-06-04 11:24:37] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:45 shared
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 09:45 input.tar.gz
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:45 boinc_lockfile
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 09:45 pandaJob.out
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas    986819 Jun  4 09:46 agis_schedconf.cvmfs.json
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas   1598969 Jun  4 09:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:24:37] drwx------ 4 boincer umatlas      4096 Jun  4 09:46 pilot3
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 11:18 init_data.xml
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:23 boinc_task_state.xml
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas 198111175 Jun  4 11:23 HITS.44871837._063407.pool.root.1
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas        95 Jun  4 11:23 pilot_heartbeat.json
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas      1078 Jun  4 11:24 memory_monitor_summary.json
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas    331524 Jun  4 11:24 log.44871837._063407.job.log.tgz.1
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas      7746 Jun  4 11:24 heartbeat.json
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:24 boinc_mmap_file
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:24 wrapper_checkpoint.txt
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas      4612 Jun  4 11:24 pilotlog.txt
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas    566982 Jun  4 11:24 log.44871837._063407.job.log.1
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas       357 Jun  4 11:24 output.list
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:24 runtime_log
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas    921600 Jun  4 11:24 result.tar.gz
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:24 runtime_log.err
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas       658 Jun  4 11:24 r8dMDmnu2d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPlYKDmTJROPm.diag
[2025-06-04 11:24:37] -rw-r--r-- 1 boincer umatlas     21599 Jun  4 11:24 stderr.txt
[2025-06-04 11:24:37] HITS file was successfully produced:
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas 198111175 Jun  4 11:23 shared/HITS.pool.root.1
[2025-06-04 11:24:37]  *** Contents of shared directory: ***
[2025-06-04 11:24:37] total 411200
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas 221501114 Jun  4 09:45 ATLAS.root_0
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:45 start_atlas.sh
[2025-06-04 11:24:37] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 09:45 input.tar.gz
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas 198111175 Jun  4 11:23 HITS.pool.root.1
[2025-06-04 11:24:37] -rw------- 1 boincer umatlas    921600 Jun  4 11:24 result.tar.gz
11:24:39 (91869): run_atlas exited; CPU time 40004.651195
11:24:39 (91869): called boinc_finish(0)

</stderr_txt>
]]>

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