Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:27 (27752): wrapper (7.7.26015): starting
09:51:27 (27752): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:51:27] Arguments: --nthreads 12
[2025-06-04 09:51:27] Threads: 12
[2025-06-04 09:51:27] Checking for CVMFS
[2025-06-04 09:51:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:51:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:51:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:51:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:51:28] 2.11.2.0 3035 35719 83776 146781 3 56 17865586 20275200 1 130560 0 16371418 99.983 6602152 7944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:51:28] CVMFS is ok
[2025-06-04 09:51:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:51:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:51:28] Further information can be found at the LHC@home message board.
[2025-06-04 09:51:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:51:28] Checking for apptainer binary...
[2025-06-04 09:51:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:51:28] Running /usr/bin/apptainer --version
[2025-06-04 09:51:28] apptainer version 1.3.2-1.el7
[2025-06-04 09:51:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:51:29] c-205-31.aglt2.org
[2025-06-04 09:51:29] apptainer works
[2025-06-04 09:51:29] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:51:29] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:51:29] Starting ATLAS job with PandaID=6679636211
[2025-06-04 09:51:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:56:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:56:51]  guid=4c7a7c61-1b17-424d-8c87-2b6df5ff8d2f
[2025-06-04 10:56:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:56:51]  is_altstaged=None
[2025-06-04 10:56:51]  is_tar=False
[2025-06-04 10:56:51]  lfn=log.45006595._056559.job.log.tgz.1
[2025-06-04 10:56:51]  mtime=0
[2025-06-04 10:56:51]  protocol_id=None
[2025-06-04 10:56:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:56:51]  replicas=None
[2025-06-04 10:56:51]  scope=mc23_13p6TeV
[2025-06-04 10:56:51]  status=None
[2025-06-04 10:56:51]  status_code=0
[2025-06-04 10:56:51]  storage_token=
[2025-06-04 10:56:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679636211/log.45006595._056559.job.log.tgz.1
[2025-06-04 10:56:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/60/log.45006595._056559.job.log.tgz.1
[2025-06-04 10:56:51]  workdir=None
[2025-06-04 10:56:51] ]
[2025-06-04 10:56:51] 2025-06-04 14:56:25,603 | INFO     | transferring file log.45006595._056559.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679636211/log.45006595._056559.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:56:51] 2025-06-04 14:56:25,603 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679636211/log.45006595._056559.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056559.job
[2025-06-04 10:56:51] 2025-06-04 14:56:25,626 | INFO     | adding to output.list: log.45006595._056559.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/60/log.45006595._056559.job.log.tg
[2025-06-04 10:56:51] 2025-06-04 14:56:25,627 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:56:51] 2025-06-04 14:56:25,627 | INFO     | summary of transferred files:
[2025-06-04 10:56:51] 2025-06-04 14:56:25,628 | INFO     |  -- lfn=log.45006595._056559.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:56:51] 2025-06-04 14:56:25,628 | INFO     | stage-out finished correctly
[2025-06-04 10:56:51] 2025-06-04 14:56:27,736 | WARNING  | process 5521 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:56:51] 2025-06-04 14:56:27,736 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679636211/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:56:51] 2025-06-04 14:56:27,801 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:56:51] 2025-06-04 14:56:27,885 | INFO     | job 6679636211 has state=finished
[2025-06-04 10:56:51] 2025-06-04 14:56:27,885 | INFO     | preparing for final server update for job 6679636211 in state='finished'
[2025-06-04 10:56:51] 2025-06-04 14:56:27,886 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:56:51] 2025-06-04 14:56:27,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:56:51] 2025-06-04 14:56:27,886 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:56:51] 2025-06-04 14:56:27,887 | INFO     | job 6679636211 has finished - writing final server update
[2025-06-04 10:56:51] 2025-06-04 14:56:27,887 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:56:51] 2025-06-04 14:56:27,890 | INFO     | executing command: lscpu
[2025-06-04 10:56:51] 2025-06-04 14:56:27,915 | INFO     | number of running child processes to parent process 5521: 1
[2025-06-04 10:56:51] 2025-06-04 14:56:27,915 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:56:51] 2025-06-04 14:56:27,918 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:56:51] 2025-06-04 14:56:30,418 | INFO     | monitor loop #292: job 0:6679636211 is in state 'finished'
[2025-06-04 10:56:51] 2025-06-04 14:56:30,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,646 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:56:51] 2025-06-04 14:56:32,646 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679636211/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,647 | INFO     | extracted standard info from prmon json
[2025-06-04 10:56:51] 2025-06-04 14:56:32,648 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:56:51] 2025-06-04 14:56:32,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:56:51] 2025-06-04 14:56:32,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:56:51] 2025-06-04 14:56:32,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:56:51] 2025-06-04 14:56:32,651 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:56:51] 2025-06-04 14:56:32,651 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,651 | INFO     | sum of deviations: -5834720516.0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,652 | INFO     | mean x: 1749047147.0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,652 | INFO     | mean y: 2848304.263157895
[2025-06-04 10:56:51] 2025-06-04 14:56:32,652 | INFO     | -- intersect: 177770311240.55945
[2025-06-04 10:56:51] 2025-06-04 14:56:32,652 | INFO     | intersect: 177770311240.55945
[2025-06-04 10:56:51] 2025-06-04 14:56:32,652 | INFO     | chi2: 0.049707410761679026
[2025-06-04 10:56:51] 2025-06-04 14:56:32,653 | INFO     | -- intersect: 177770311240.55945
[2025-06-04 10:56:51] 2025-06-04 14:56:32,653 | INFO     | current memory leak: -101.64 B/s (using 57 data points, chi2=0.05)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,653 | INFO     | ..............................
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . Timing measurements:
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . get job = 0 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . initial setup = 2 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . payload setup = 9 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . stage-in = 0 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,654 | INFO     | . payload execution = 3852 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,655 | INFO     | . stage-out = 0 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,655 | INFO     | . log creation = 0 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,655 | INFO     | ..............................
[2025-06-04 10:56:51] 2025-06-04 14:56:32,737 | INFO     | 
[2025-06-04 10:56:51] 2025-06-04 14:56:32,737 | INFO     | job summary report
[2025-06-04 10:56:51] 2025-06-04 14:56:32,737 | INFO     | --------------------------------------------------
[2025-06-04 10:56:51] 2025-06-04 14:56:32,737 | INFO     | PanDA job id: 6679636211
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | task id: 45006595
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | errors: (none)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | pilot state: finished 
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | transexitcode: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,738 | INFO     | exeerrorcode: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | exeerrordiag: 
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | exitcode: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | exitmsg: OK
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | cpuconsumptiontime: 41261 s
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | nevents: 400
[2025-06-04 10:56:51] 2025-06-04 14:56:32,739 | INFO     | neventsw: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | pid: 5521
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | pgrp: 5521
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | corecount: 12
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | event service: False
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | sizes: {0: 2397120, 1: 2397319, 5: 2397525, 11: 2397581, 3865: 2423305, 3866: 2423304, 3867: 2432429, 3869: 2432485, 3874: 2432655}
[2025-06-04 10:56:51] 2025-06-04 14:56:32,740 | INFO     | --------------------------------------------------
[2025-06-04 10:56:51] 2025-06-04 14:56:32,741 | INFO     | 
[2025-06-04 10:56:51] 2025-06-04 14:56:32,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:56:51] 2025-06-04 14:56:32,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:56:51] 2025-06-04 14:56:32,771 | INFO     | job 6679636211 has completed (purged errors)
[2025-06-04 10:56:51] 2025-06-04 14:56:32,771 | INFO     | overall cleanup function is called
[2025-06-04 10:56:51] 2025-06-04 14:56:33,780 | INFO     | --- collectZombieJob: --- 10, [5521]
[2025-06-04 10:56:51] 2025-06-04 14:56:33,780 | INFO     | zombie collector waiting for pid 5521
[2025-06-04 10:56:51] 2025-06-04 14:56:33,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:56:51] 2025-06-04 14:56:33,780 | INFO     | collected zombie processes
[2025-06-04 10:56:51] 2025-06-04 14:56:33,780 | INFO     | will attempt to kill all subprocesses of pid=5521
[2025-06-04 10:56:51] 2025-06-04 14:56:33,868 | INFO     | process IDs to be killed: [5521] (in reverse order)
[2025-06-04 10:56:51] 2025-06-04 14:56:33,921 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:56:51] 2025-06-04 14:56:33,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:56:51] 2025-06-04 14:56:33,925 | INFO     | did not find any defunct processes belonging to 5521
[2025-06-04 10:56:51] 2025-06-04 14:56:33,927 | INFO     | did not find any defunct processes belonging to 5521
[2025-06-04 10:56:51] 2025-06-04 14:56:33,928 | INFO     | ready for new job
[2025-06-04 10:56:51] 2025-06-04 14:56:33,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:56:51] 2025-06-04 14:56:33,929 | INFO     | **************************************
[2025-06-04 10:56:51] 2025-06-04 14:56:33,929 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:56:51] 2025-06-04 14:56:33,929 | INFO     | **************************************
[2025-06-04 10:56:51] 2025-06-04 14:56:33,929 | INFO     | 
[2025-06-04 10:56:51] 2025-06-04 14:56:33,930 | INFO     | architecture information:
[2025-06-04 10:56:51] 2025-06-04 14:56:33,930 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:56:51] 2025-06-04 14:56:33,946 | INFO     | cat /etc/os-release:
[2025-06-04 10:56:51] NAME="CentOS Linux"
[2025-06-04 10:56:51] VERSION="7 (Core)"
[2025-06-04 10:56:51] ID="centos"
[2025-06-04 10:56:51] ID_LIKE="rhel fedora"
[2025-06-04 10:56:51] VERSION_ID="7"
[2025-06-04 10:56:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:56:51] ANSI_COLOR="0;31"
[2025-06-04 10:56:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:56:51] HOME_URL="https://www.centos.org/"
[2025-06-04 10:56:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:56:51] 
[2025-06-04 10:56:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:56:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:56:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:56:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:56:51] 
[2025-06-04 10:56:51] 2025-06-04 14:56:33,946 | INFO     | **************************************
[2025-06-04 10:56:51] 2025-06-04 14:56:34,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:56:51] 2025-06-04 14:56:34,466 | INFO     | sufficient remaining disk space (29412556800 B)
[2025-06-04 10:56:51] 2025-06-04 14:56:34,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:56:51] 2025-06-04 14:56:34,467 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:56:51] 2025-06-04 14:56:34,467 | INFO     | update_server=False
[2025-06-04 10:56:51] 2025-06-04 14:56:34,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:56:51] 2025-06-04 14:56:34,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:56:51] 2025-06-04 14:56:34,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:56:51] 2025-06-04 14:56:34,468 | INFO     | aborting loop
[2025-06-04 10:56:51] 2025-06-04 14:56:34,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:56:51] 2025-06-04 14:56:34,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:56:51] 2025-06-04 14:56:34,802 | INFO     | all payload control threads have been joined
[2025-06-04 10:56:51] 2025-06-04 14:56:34,996 | INFO     | all job control threads have been joined
[2025-06-04 10:56:51] 2025-06-04 14:56:35,061 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:56:51] 2025-06-04 14:56:35,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:56:51] 2025-06-04 14:56:35,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:56:51] 2025-06-04 14:56:35,388 | INFO     | all data control threads have been joined
[2025-06-04 10:56:51] 2025-06-04 14:56:35,470 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:35,472 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:35,474 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:35,483 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:35,757 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:35,808 | INFO     | [payload] control thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,002 | INFO     | [job] control thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,148 | INFO     | [job] validate thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,393 | INFO     | [data] control thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,468 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,504 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,798 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:36,841 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:38,475 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:44,930 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:56:51] 2025-06-04 14:56:45,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:56:51] 2025-06-04 14:56:46,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631373985600)>', '<ExcThread(monitor, started 140630114170624)>']
[2025-06-04 10:56:51] 2025-06-04 14:56:47,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:56:51] 2025-06-04 14:56:47,105 | INFO     | [monitor] control thread has ended
[2025-06-04 10:56:51] 2025-06-04 14:56:51,695 | INFO     | all workflow threads have been joined
[2025-06-04 10:56:51] 2025-06-04 14:56:51,696 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:56:51] 2025-06-04 14:56:51,696 | INFO     | traces error code: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:51,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:56:51] 2025-06-04 14:56:51,783 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:56:51] 2025-06-04 14:56:51,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:56:51] 2025-06-04 14:56:51,791 [wrapper] pilotpid: 31333
[2025-06-04 10:56:51] 2025-06-04 14:56:51,794 [wrapper] Pilot exit status: 0
[2025-06-04 10:56:51] 2025-06-04 14:56:51,810 [wrapper] pandaids: 6679636211
[2025-06-04 10:56:51] 2025-06-04 14:56:51,850 [wrapper] cleanup supervisor_pilot 21877 31334
[2025-06-04 10:56:51] 2025-06-04 14:56:51,853 [wrapper] Test setup, not cleaning
[2025-06-04 10:56:51] 2025-06-04 14:56:51,857 [wrapper] apfmon messages muted
[2025-06-04 10:56:51] 2025-06-04 14:56:51,861 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:56:51] 2025-06-04 14:56:51,864 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:56:51]  *** Error codes and diagnostics ***
[2025-06-04 10:56:51]     "exeErrorCode": 0,
[2025-06-04 10:56:51]     "exeErrorDiag": "",
[2025-06-04 10:56:51]     "pilotErrorCode": 0,
[2025-06-04 10:56:51]     "pilotErrorDiag": "",
[2025-06-04 10:56:51]  *** Listing of results directory ***
[2025-06-04 10:56:51] total 394900
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 06:59 pilot3.tar.gz
[2025-06-04 10:56:51] -rwx------ 1 boincer umatlas     37140 Jun  4 07:02 runpilot2-wrapper.sh
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 07:02 queuedata.json
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:56:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:51 run_atlas
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:51 job.xml
[2025-06-04 10:56:51] -rw-r--r-- 2 boincer umatlas 218264142 Jun  4 09:51 EVNT.45006593._001808.pool.root.1
[2025-06-04 10:56:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 10:56:51] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:51 shared
[2025-06-04 10:56:51] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 09:51 input.tar.gz
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:51 boinc_lockfile
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 09:51 pandaJob.out
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas    986819 Jun  4 09:51 agis_schedconf.cvmfs.json
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas   1598969 Jun  4 09:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:56:51] drwx------ 4 boincer umatlas      4096 Jun  4 09:51 pilot3
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 10:54 init_data.xml
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas 180812942 Jun  4 10:55 HITS.45006595._056559.pool.root.1
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:56 boinc_task_state.xml
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas      1048 Jun  4 10:56 memory_monitor_summary.json
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas    353650 Jun  4 10:56 log.45006595._056559.job.log.tgz.1
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas      7751 Jun  4 10:56 heartbeat.json
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas        95 Jun  4 10:56 pilot_heartbeat.json
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:56 boinc_mmap_file
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:56 wrapper_checkpoint.txt
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas      4425 Jun  4 10:56 pilotlog.txt
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas    380823 Jun  4 10:56 log.45006595._056559.job.log.1
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas       357 Jun  4 10:56 output.list
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:56 runtime_log
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas    757760 Jun  4 10:56 result.tar.gz
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 10:56 runtime_log.err
[2025-06-04 10:56:51] -rw------- 1 boincer umatlas       659 Jun  4 10:56 OBSNDm230g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmV2aKDmS4obCo.diag
[2025-06-04 10:56:51] -rw-r--r-- 1 boincer umatlas     21270 Jun  4 10:56 stderr.txt
[2025-06-04 10:56:52] HITS file was successfully produced:
[2025-06-04 10:56:52] -rw------- 1 boincer umatlas 180812942 Jun  4 10:55 shared/HITS.pool.root.1
[2025-06-04 10:56:52]  *** Contents of shared directory: ***
[2025-06-04 10:56:52] total 390988
[2025-06-04 10:56:52] -rw-r--r-- 2 boincer umatlas 218264142 Jun  4 09:51 ATLAS.root_0
[2025-06-04 10:56:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 10:56:52] -rw-r--r-- 2 boincer umatlas    508887 Jun  4 09:51 input.tar.gz
[2025-06-04 10:56:52] -rw------- 1 boincer umatlas 180812942 Jun  4 10:55 HITS.pool.root.1
[2025-06-04 10:56:52] -rw------- 1 boincer umatlas    757760 Jun  4 10:56 result.tar.gz
10:56:53 (27752): run_atlas exited; CPU time 41235.318762
10:56:53 (27752): called boinc_finish(0)

</stderr_txt>
]]>

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