Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:37:45 (2413368): wrapper (7.7.26015): starting
03:37:45 (2413368): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:37:45] Arguments: --nthreads 4
[2025-06-06 03:37:45] Threads: 4
[2025-06-06 03:37:45] Checking for CVMFS
[2025-06-06 03:37:45] No cvmfs_config command found, will try listing directly
[2025-06-06 03:37:45] CVMFS is ok
[2025-06-06 03:37:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:37:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:37:45] Further information can be found at the LHC@home message board.
[2025-06-06 03:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:37:45] Checking for apptainer binary...
[2025-06-06 03:37:45] which: no apptainer in ((null))
[2025-06-06 03:37:45] apptainer is not installed, using version from CVMFS
[2025-06-06 03:37:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:37:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-06 03:37:45] apptainer works
[2025-06-06 03:37:45] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:37:45] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:37:45] Starting ATLAS job with PandaID=6678364499
[2025-06-06 03:37:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:21:12]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:21:12] 2025-06-06 03:20:53,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:21:12] 2025-06-06 03:20:53,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:21:12] 2025-06-06 03:20:53,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:21:12] 2025-06-06 03:20:53,783 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:21:12] 2025-06-06 03:20:53,783 | INFO     | sum of square deviations: 319447850.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | sum of deviations: 2796341870.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | mean x: 1749176960.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | mean y: 2343877.8514851485
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | -- intersect: -15309378430.773586
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | intersect: -15309378430.773586
[2025-06-06 05:21:12] 2025-06-06 03:20:53,784 | INFO     | chi2: 1.4099138276247372
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | sum of square deviations: 274312120.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | sum of deviations: 2757407583.0000024
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | mean x: 1749176807.5
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | mean y: 2343742.3333333335
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | -- intersect: -17580522785.796143
[2025-06-06 05:21:12] 2025-06-06 03:20:53,785 | INFO     | intersect: -17580522785.796143
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | chi2: 1.4121359345451252
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | current chi2=1.4121359345451252 (change=-0.15760586759629125 %)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | right removable region: 95
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | sum of square deviations: 274312120.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | sum of deviations: -9334649226.5
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | mean x: 1749177112.5
[2025-06-06 05:21:12] 2025-06-06 03:20:53,786 | INFO     | mean y: 2383721.03125
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | -- intersect: 59525655168.93384
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | intersect: 59525655168.93384
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | chi2: 0.04697002213863918
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | current chi2=0.04697002213863918 (change=96.66858915641895 %)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | sum of square deviations: 233641590.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,787 | INFO     | sum of deviations: -7669119043.000001
[2025-06-06 05:21:12] 2025-06-06 03:20:53,788 | INFO     | mean x: 1749177265.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,788 | INFO     | mean y: 2377447.3736263737
[2025-06-06 05:21:12] 2025-06-06 03:20:53,788 | INFO     | -- intersect: 57417877284.513756
[2025-06-06 05:21:12] 2025-06-06 03:20:53,788 | INFO     | intersect: 57417877284.513756
[2025-06-06 05:21:12] 2025-06-06 03:20:53,790 | INFO     | chi2: 0.04629970743426517
[2025-06-06 05:21:12] 2025-06-06 03:20:53,790 | INFO     | current chi2=0.04629970743426517 (change=1.4271117488415757 %)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,790 | INFO     | left removable region: 20
[2025-06-06 05:21:12] 2025-06-06 03:20:53,790 | INFO     | sum of square deviations: 130793150.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,790 | INFO     | sum of deviations: -3376883323.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | mean x: 1749177387.0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | mean y: 2360048.08
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | -- intersect: 45163501492.6359
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | intersect: 45163501492.6359
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | chi2: 0.03193997117496477
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | -- intersect: 45163501492.6359
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | current memory leak: -25.82 B/s (using 75 data points, chi2=0.03)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,791 | INFO     | ..............................
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . Timing measurements:
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . get job = 0 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . initial setup = 1 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . payload setup = 9 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . stage-in = 0 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . payload execution = 6141 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . stage-out = 0 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | . log creation = 0 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,792 | INFO     | ..............................
[2025-06-06 05:21:12] 2025-06-06 03:20:53,933 | INFO     | 
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | job summary report
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | --------------------------------------------------
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | PanDA job id: 6678364499
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | task id: 45006595
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | errors: (none)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | pilot state: finished 
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | transexitcode: 0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | exeerrorcode: 0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | exeerrordiag: 
[2025-06-06 05:21:12] 2025-06-06 03:20:53,934 | INFO     | exitcode: 0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | exitmsg: OK
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | cpuconsumptiontime: 23197 s
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | nevents: 400
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | neventsw: 0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | pid: 2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | pgrp: 2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | corecount: 4
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | event service: False
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | sizes: {0: 2397239, 1: 2397381, 7: 2397587, 11: 2397615, 6154: 2424321, 6155: 2433468, 6159: 2433582}
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | --------------------------------------------------
[2025-06-06 05:21:12] 2025-06-06 03:20:53,935 | INFO     | 
[2025-06-06 05:21:12] 2025-06-06 03:20:53,936 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-06-06 05:21:12] 2025-06-06 03:20:53,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:21:12] 2025-06-06 03:20:53,963 | INFO     | job 6678364499 has completed (purged errors)
[2025-06-06 05:21:12] 2025-06-06 03:20:53,963 | INFO     | overall cleanup function is called
[2025-06-06 05:21:12] 2025-06-06 03:20:54,114 | WARNING  | process 2425439 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 05:21:12] 2025-06-06 03:20:54,410 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:21:12] 2025-06-06 03:20:54,411 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6678364499/payload.stdout) since it has not been created yet
[2025-06-06 05:21:12] 2025-06-06 03:20:54,411 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-06-06 05:21:12] 2025-06-06 03:20:54,427 | INFO     | sufficient remaining disk space (3292463628288 B)
[2025-06-06 05:21:12] 2025-06-06 03:20:54,427 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-06 05:21:12] 2025-06-06 03:20:54,427 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6678364499/HITS.45006595._053999.pool.root.1 since it does not exist
[2025-06-06 05:21:12] 2025-06-06 03:20:54,816 | INFO     | number of running child processes to parent process 2425439: 1
[2025-06-06 05:21:12] 2025-06-06 03:20:54,816 | INFO     | maximum number of monitored processes: 6
[2025-06-06 05:21:12] 2025-06-06 03:20:54,816 | INFO     | aborting job monitoring since job object (job id=6678364499) has expired
[2025-06-06 05:21:12] 2025-06-06 03:20:54,973 | INFO     | --- collectZombieJob: --- 10, [2425439]
[2025-06-06 05:21:12] 2025-06-06 03:20:54,973 | INFO     | zombie collector waiting for pid 2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:54,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:21:12] 2025-06-06 03:20:54,973 | INFO     | collected zombie processes
[2025-06-06 05:21:12] 2025-06-06 03:20:54,974 | INFO     | will attempt to kill all subprocesses of pid=2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:55,370 | INFO     | process IDs to be killed: [2425439] (in reverse order)
[2025-06-06 05:21:12] 2025-06-06 03:20:55,499 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:21:12] 2025-06-06 03:20:55,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:21:12] 2025-06-06 03:20:55,516 | INFO     | did not find any defunct processes belonging to 2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:55,529 | INFO     | did not find any defunct processes belonging to 2425439
[2025-06-06 05:21:12] 2025-06-06 03:20:55,529 | INFO     | ready for new job
[2025-06-06 05:21:12] 2025-06-06 03:20:55,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:21:12] 2025-06-06 03:20:55,530 | INFO     | **************************************
[2025-06-06 05:21:12] 2025-06-06 03:20:55,530 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:21:12] 2025-06-06 03:20:55,530 | INFO     | **************************************
[2025-06-06 05:21:12] 2025-06-06 03:20:55,530 | INFO     | 
[2025-06-06 05:21:12] 2025-06-06 03:20:55,536 | INFO     | architecture information:
[2025-06-06 05:21:12] 2025-06-06 03:20:55,536 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:21:12] 2025-06-06 03:20:55,550 | INFO     | cat /etc/os-release:
[2025-06-06 05:21:12] NAME="CentOS Linux"
[2025-06-06 05:21:12] VERSION="7 (Core)"
[2025-06-06 05:21:12] ID="centos"
[2025-06-06 05:21:12] ID_LIKE="rhel fedora"
[2025-06-06 05:21:12] VERSION_ID="7"
[2025-06-06 05:21:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:21:12] ANSI_COLOR="0;31"
[2025-06-06 05:21:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:21:12] HOME_URL="https://www.centos.org/"
[2025-06-06 05:21:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:21:12] 
[2025-06-06 05:21:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:21:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:21:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:21:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:21:12] 
[2025-06-06 05:21:12] 2025-06-06 03:20:55,550 | INFO     | **************************************
[2025-06-06 05:21:12] 2025-06-06 03:20:56,053 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-06-06 05:21:12] 2025-06-06 03:20:56,071 | INFO     | sufficient remaining disk space (3292462579712 B)
[2025-06-06 05:21:12] 2025-06-06 03:20:56,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:21:12] 2025-06-06 03:20:56,071 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:21:12] 2025-06-06 03:20:56,072 | INFO     | update_server=False
[2025-06-06 05:21:12] 2025-06-06 03:20:56,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:21:12] 2025-06-06 03:20:56,072 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:21:12] 2025-06-06 03:20:56,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:21:12] 2025-06-06 03:20:56,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:21:12] 2025-06-06 03:20:56,073 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:21:12] 2025-06-06 03:20:56,073 | INFO     | aborting loop
[2025-06-06 05:21:12] 2025-06-06 03:20:56,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:21:12] 2025-06-06 03:20:56,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:21:12] 2025-06-06 03:20:56,245 | INFO     | all data control threads have been joined
[2025-06-06 05:21:12] 2025-06-06 03:20:56,864 | INFO     | all payload control threads have been joined
[2025-06-06 05:21:12] 2025-06-06 03:20:57,077 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,079 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,114 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,240 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,250 | INFO     | [data] control thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:21:12] 2025-06-06 03:20:57,675 | INFO     | all job control threads have been joined
[2025-06-06 05:21:12] 2025-06-06 03:20:57,821 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,870 | INFO     | [payload] control thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:57,976 | INFO     | [job] validate thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:58,225 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:58,362 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:58,455 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:58,681 | INFO     | [job] control thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:58,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:21:12] 2025-06-06 03:20:59,393 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:20:59,891 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:21:00,079 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:21:06,090 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:21:12] 2025-06-06 03:21:07,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:21:12] 2025-06-06 03:21:07,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23334816708416)>', '<ExcThread(monitor, started 23334580356864)>']
[2025-06-06 05:21:12] 2025-06-06 03:21:08,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:21:12] 2025-06-06 03:21:08,134 | INFO     | [monitor] control thread has ended
[2025-06-06 05:21:12] 2025-06-06 03:21:12,518 | INFO     | all workflow threads have been joined
[2025-06-06 05:21:12] 2025-06-06 03:21:12,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:21:12] 2025-06-06 03:21:12,519 | INFO     | traces error code: 0
[2025-06-06 05:21:12] 2025-06-06 03:21:12,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:21:12] 2025-06-06 03:21:12,638 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:21:12] 2025-06-06 03:21:12,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:21:12] 2025-06-06 03:21:12,645 [wrapper] pilotpid: 2417419
[2025-06-06 05:21:12] 2025-06-06 03:21:12,648 [wrapper] Pilot exit status: 0
[2025-06-06 05:21:12] 2025-06-06 03:21:12,661 [wrapper] pandaids: 6678364499
[2025-06-06 05:21:12] 2025-06-06 03:21:12,763 [wrapper] cleanup supervisor_pilot 2624609 2417420
[2025-06-06 05:21:12] 2025-06-06 03:21:12,766 [wrapper] Test setup, not cleaning
[2025-06-06 05:21:12] 2025-06-06 03:21:12,770 [wrapper] apfmon messages muted
[2025-06-06 05:21:12] 2025-06-06 03:21:12,773 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:21:12] 2025-06-06 03:21:12,775 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:21:12]  *** Error codes and diagnostics ***
[2025-06-06 05:21:12]     "exeErrorCode": 0,
[2025-06-06 05:21:12]     "exeErrorDiag": "",
[2025-06-06 05:21:12]     "pilotErrorCode": 0,
[2025-06-06 05:21:12]     "pilotErrorDiag": "",
[2025-06-06 05:21:12]  *** Listing of results directory ***
[2025-06-06 05:21:12] total 392672
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc      5111 Jun  4 08:24 queuedata.json
[2025-06-06 05:21:12] -rwx------ 1 boinc boinc     37140 Jun  4 08:25 runpilot2-wrapper.sh
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:21:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:37 run_atlas
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:37 job.xml
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc      6685 Jun  6 03:37 init_data.xml
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc 215793890 Jun  6 03:37 EVNT.45006593._002161.pool.root.1
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:37 start_atlas.sh
[2025-06-06 05:21:12] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:37 shared
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc    508885 Jun  6 03:37 input.tar.gz
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:37 boinc_lockfile
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:37 pandaJob.out
[2025-06-06 05:21:12] -rw------- 1 boinc boinc    987721 Jun  6 03:37 agis_schedconf.cvmfs.json
[2025-06-06 05:21:12] -rw------- 1 boinc boinc   1598969 Jun  6 03:37 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:21:12] drwx------ 4 boinc boinc      4096 Jun  6 03:37 pilot3
[2025-06-06 05:21:12] -rw------- 1 boinc boinc        95 Jun  6 05:20 pilot_heartbeat.json
[2025-06-06 05:21:12] -rw------- 1 boinc boinc 180766228 Jun  6 05:20 HITS.45006595._053999.pool.root.1
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc       529 Jun  6 05:20 boinc_task_state.xml
[2025-06-06 05:21:12] -rw------- 1 boinc boinc      1030 Jun  6 05:20 memory_monitor_summary.json
[2025-06-06 05:21:12] -rw------- 1 boinc boinc    261459 Jun  6 05:20 log.45006595._053999.job.log.tgz.1
[2025-06-06 05:21:12] -rw------- 1 boinc boinc      7701 Jun  6 05:20 heartbeat.json
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:21 boinc_mmap_file
[2025-06-06 05:21:12] -rw------- 1 boinc boinc      4559 Jun  6 05:21 pilotlog.txt
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc        27 Jun  6 05:21 wrapper_checkpoint.txt
[2025-06-06 05:21:12] -rw------- 1 boinc boinc    585490 Jun  6 05:21 log.45006595._053999.job.log.1
[2025-06-06 05:21:12] -rw------- 1 boinc boinc       357 Jun  6 05:21 output.list
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:21 runtime_log
[2025-06-06 05:21:12] -rw------- 1 boinc boinc    870400 Jun  6 05:21 result.tar.gz
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:21 runtime_log.err
[2025-06-06 05:21:12] -rw------- 1 boinc boinc       663 Jun  6 05:21 HjvMDmujwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgTnKDmDQss0m.diag
[2025-06-06 05:21:12] -rw-r--r-- 1 boinc boinc     21015 Jun  6 05:21 stderr.txt
[2025-06-06 05:21:12] HITS file was successfully produced:
[2025-06-06 05:21:12] -rw------- 1 boinc boinc 180766228 Jun  6 05:20 shared/HITS.pool.root.1
[2025-06-06 05:21:12]  *** Contents of shared directory: ***
[2025-06-06 05:21:12] total 388648
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc 215793890 Jun  6 03:37 ATLAS.root_0
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:37 start_atlas.sh
[2025-06-06 05:21:12] -rw-r--r-- 2 boinc boinc    508885 Jun  6 03:37 input.tar.gz
[2025-06-06 05:21:12] -rw------- 1 boinc boinc 180766228 Jun  6 05:20 HITS.pool.root.1
[2025-06-06 05:21:12] -rw------- 1 boinc boinc    870400 Jun  6 05:21 result.tar.gz
05:21:14 (2413368): run_atlas exited; CPU time 23495.028566
05:21:14 (2413368): called boinc_finish(0)

</stderr_txt>
]]>

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