Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:51:14 (3836552): wrapper (7.7.26015): starting
09:51:14 (3836552): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:51:14] Arguments: --nthreads 8
[2025-06-04 09:51:14] Threads: 8
[2025-06-04 09:51:14] Checking for CVMFS
[2025-06-04 09:51:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:51:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:51:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:51:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:51:15] 2.12.6.0 9081 31583 542916 146781 0 68 16590186 32935936 14274 16776704 0 179782851 99.655 159309260 25920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:51:15] CVMFS is ok
[2025-06-04 09:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:51:15] Further information can be found at the LHC@home message board.
[2025-06-04 09:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:51:15] Checking for apptainer binary...
[2025-06-04 09:51:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:51:15] Running /usr/bin/apptainer --version
[2025-06-04 09:51:15] apptainer version 1.4.1-1.el9
[2025-06-04 09:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:51:15] c6-12-29-3.aglt2.org
[2025-06-04 09:51:15] apptainer works
[2025-06-04 09:51:15] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:51:15] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:51:15] Starting ATLAS job with PandaID=6678907460
[2025-06-04 09:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:53:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:53:46]  is_altstaged=None
[2025-06-04 10:53:46]  is_tar=False
[2025-06-04 10:53:46]  lfn=log.45006595._055680.job.log.tgz.1
[2025-06-04 10:53:46]  mtime=0
[2025-06-04 10:53:46]  protocol_id=None
[2025-06-04 10:53:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:53:46]  replicas=None
[2025-06-04 10:53:46]  scope=mc23_13p6TeV
[2025-06-04 10:53:46]  status=None
[2025-06-04 10:53:46]  status_code=0
[2025-06-04 10:53:46]  storage_token=
[2025-06-04 10:53:46]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678907460/log.45006595._055680.job.log.tgz.1
[2025-06-04 10:53:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/1a/log.45006595._055680.job.log.tgz.1
[2025-06-04 10:53:46]  workdir=None
[2025-06-04 10:53:46] ]
[2025-06-04 10:53:46] 2025-06-04 14:53:17,969 | INFO     | transferring file log.45006595._055680.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678907460/log.45006595._055680.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:53:46] 2025-06-04 14:53:17,969 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678907460/log.45006595._055680.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055680.job
[2025-06-04 10:53:46] 2025-06-04 14:53:17,988 | INFO     | adding to output.list: log.45006595._055680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/1a/log.45006595._055680.job.log.tg
[2025-06-04 10:53:46] 2025-06-04 14:53:17,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:53:46] 2025-06-04 14:53:17,990 | INFO     | summary of transferred files:
[2025-06-04 10:53:46] 2025-06-04 14:53:17,990 | INFO     |  -- lfn=log.45006595._055680.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:53:46] 2025-06-04 14:53:17,990 | INFO     | stage-out finished correctly
[2025-06-04 10:53:46] 2025-06-04 14:53:20,467 | INFO     | PID=3840345 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:53:46] 2025-06-04 14:53:20,467 | INFO     | .. there are 22 such processes running
[2025-06-04 10:53:46] 2025-06-04 14:53:21,116 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:53:46] 2025-06-04 14:53:22,724 | WARNING  | process 3847278 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:53:46] 2025-06-04 14:53:22,724 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678907460/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:53:46] 2025-06-04 14:53:23,064 | INFO     | number of running child processes to parent process 3847278: 1
[2025-06-04 10:53:46] 2025-06-04 14:53:23,064 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:53:46] 2025-06-04 14:53:23,391 | INFO     | job 6678907460 has state=finished
[2025-06-04 10:53:46] 2025-06-04 14:53:23,391 | INFO     | preparing for final server update for job 6678907460 in state='finished'
[2025-06-04 10:53:46] 2025-06-04 14:53:23,392 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:53:46] 2025-06-04 14:53:23,392 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:53:46] 2025-06-04 14:53:23,392 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:53:46] 2025-06-04 14:53:23,392 | INFO     | job 6678907460 has finished - writing final server update
[2025-06-04 10:53:46] 2025-06-04 14:53:23,392 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:53:46] 2025-06-04 14:53:23,397 | INFO     | executing command: lscpu
[2025-06-04 10:53:46] 2025-06-04 14:53:23,445 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:53:46] 2025-06-04 14:53:25,567 | INFO     | monitor loop #275: job 0:6678907460 is in state 'finished'
[2025-06-04 10:53:46] 2025-06-04 14:53:25,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:53:46] 2025-06-04 14:53:26,991 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:53:46] 2025-06-04 14:53:26,992 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678907460/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:53:46] 2025-06-04 14:53:26,993 | INFO     | extracted standard info from prmon json
[2025-06-04 10:53:46] 2025-06-04 14:53:26,993 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:53:46] 2025-06-04 14:53:26,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:53:46] 2025-06-04 14:53:26,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:53:46] 2025-06-04 14:53:26,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:53:46] 2025-06-04 14:53:26,996 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:53:46] 2025-06-04 14:53:26,996 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 10:53:46] 2025-06-04 14:53:26,996 | INFO     | sum of deviations: 4960609060.0
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | mean x: 1749047030.5
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | mean y: 2196702.407407407
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | -- intersect: -177754408169.60318
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | intersect: -177754408169.60318
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | chi2: 0.8589034660934067
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | -- intersect: -177754408169.60318
[2025-06-04 10:53:46] 2025-06-04 14:53:26,997 | INFO     | current memory leak: 101.63 B/s (using 54 data points, chi2=0.86)
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | ..............................
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . Timing measurements:
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . get job = 0 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . initial setup = 2 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . payload setup = 5 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . stage-in = 0 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . payload execution = 3688 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . stage-out = 0 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | . log creation = 0 s
[2025-06-04 10:53:46] 2025-06-04 14:53:26,998 | INFO     | ..............................
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | 
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | job summary report
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | --------------------------------------------------
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | PanDA job id: 6678907460
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | task id: 45006595
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | errors: (none)
[2025-06-04 10:53:46] 2025-06-04 14:53:27,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | pilot state: finished 
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | transexitcode: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | exeerrorcode: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | exeerrordiag: 
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | exitcode: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | exitmsg: OK
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | cpuconsumptiontime: 24543 s
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | nevents: 400
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | neventsw: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | pid: 3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | pgrp: 3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | corecount: 8
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | event service: False
[2025-06-04 10:53:46] 2025-06-04 14:53:27,558 | INFO     | sizes: {0: 2397286, 1: 2397286, 4: 2397520, 11: 2397548, 3698: 2423230, 3699: 2432171, 3702: 2432355, 3708: 2432525}
[2025-06-04 10:53:46] 2025-06-04 14:53:27,559 | INFO     | --------------------------------------------------
[2025-06-04 10:53:46] 2025-06-04 14:53:27,559 | INFO     | 
[2025-06-04 10:53:46] 2025-06-04 14:53:27,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | job 6678907460 has completed (purged errors)
[2025-06-04 10:53:46] 2025-06-04 14:53:27,580 | INFO     | overall cleanup function is called
[2025-06-04 10:53:46] 2025-06-04 14:53:28,587 | INFO     | --- collectZombieJob: --- 10, [3847278]
[2025-06-04 10:53:46] 2025-06-04 14:53:28,587 | INFO     | zombie collector waiting for pid 3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:28,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:53:46] 2025-06-04 14:53:28,588 | INFO     | collected zombie processes
[2025-06-04 10:53:46] 2025-06-04 14:53:28,588 | INFO     | will attempt to kill all subprocesses of pid=3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:28,883 | INFO     | process IDs to be killed: [3847278] (in reverse order)
[2025-06-04 10:53:46] 2025-06-04 14:53:28,986 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:53:46] 2025-06-04 14:53:28,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:53:46] 2025-06-04 14:53:29,006 | INFO     | did not find any defunct processes belonging to 3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:29,026 | INFO     | did not find any defunct processes belonging to 3847278
[2025-06-04 10:53:46] 2025-06-04 14:53:29,026 | INFO     | ready for new job
[2025-06-04 10:53:46] 2025-06-04 14:53:29,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:53:46] 2025-06-04 14:53:29,028 | INFO     | **************************************
[2025-06-04 10:53:46] 2025-06-04 14:53:29,029 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:53:46] 2025-06-04 14:53:29,029 | INFO     | **************************************
[2025-06-04 10:53:46] 2025-06-04 14:53:29,029 | INFO     | 
[2025-06-04 10:53:46] 2025-06-04 14:53:29,047 | INFO     | architecture information:
[2025-06-04 10:53:46] 2025-06-04 14:53:29,048 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:53:46] 2025-06-04 14:53:29,066 | INFO     | cat /etc/os-release:
[2025-06-04 10:53:46] NAME="CentOS Linux"
[2025-06-04 10:53:46] VERSION="7 (Core)"
[2025-06-04 10:53:46] ID="centos"
[2025-06-04 10:53:46] ID_LIKE="rhel fedora"
[2025-06-04 10:53:46] VERSION_ID="7"
[2025-06-04 10:53:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:53:46] ANSI_COLOR="0;31"
[2025-06-04 10:53:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:53:46] HOME_URL="https://www.centos.org/"
[2025-06-04 10:53:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:53:46] 
[2025-06-04 10:53:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:53:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:53:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:53:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:53:46] 
[2025-06-04 10:53:46] 2025-06-04 14:53:29,066 | INFO     | **************************************
[2025-06-04 10:53:46] 2025-06-04 14:53:29,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:53:46] 2025-06-04 14:53:29,587 | INFO     | sufficient remaining disk space (95450824704 B)
[2025-06-04 10:53:46] 2025-06-04 14:53:29,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:53:46] 2025-06-04 14:53:29,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:53:46] 2025-06-04 14:53:29,588 | INFO     | update_server=False
[2025-06-04 10:53:46] 2025-06-04 14:53:29,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:53:46] 2025-06-04 14:53:29,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:53:46] 2025-06-04 14:53:29,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:53:46] 2025-06-04 14:53:29,589 | INFO     | aborting loop
[2025-06-04 10:53:46] 2025-06-04 14:53:29,774 | INFO     | all data control threads have been joined
[2025-06-04 10:53:46] 2025-06-04 14:53:30,186 | INFO     | all payload control threads have been joined
[2025-06-04 10:53:46] 2025-06-04 14:53:30,268 | INFO     | all job control threads have been joined
[2025-06-04 10:53:46] 2025-06-04 14:53:30,492 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:53:46] 2025-06-04 14:53:30,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:53:46] 2025-06-04 14:53:30,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:53:46] 2025-06-04 14:53:30,593 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:30,595 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:30,780 | INFO     | [data] control thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:30,970 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,059 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,191 | INFO     | [payload] control thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,274 | INFO     | [job] control thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,538 | INFO     | [job] validate thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,595 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,634 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:53:46] 2025-06-04 14:53:31,829 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:31,969 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:32,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:53:46] 2025-06-04 14:53:33,109 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:35,719 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:39,811 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:53:46] 2025-06-04 14:53:40,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:53:46] 2025-06-04 14:53:41,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284366960448)>', '<ExcThread(monitor, started 140283740145408)>']
[2025-06-04 10:53:46] 2025-06-04 14:53:41,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:53:46] 2025-06-04 14:53:41,536 | INFO     | [monitor] control thread has ended
[2025-06-04 10:53:46] 2025-06-04 14:53:46,523 | INFO     | all workflow threads have been joined
[2025-06-04 10:53:46] 2025-06-04 14:53:46,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:53:46] 2025-06-04 14:53:46,525 | INFO     | traces error code: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:46,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:53:46] 2025-06-04 14:53:46,696 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:53:46] 2025-06-04 14:53:46,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:53:46] 2025-06-04 14:53:46,701 [wrapper] pilotpid: 3840345
[2025-06-04 10:53:46] 2025-06-04 14:53:46,704 [wrapper] Pilot exit status: 0
[2025-06-04 10:53:46] 2025-06-04 14:53:46,713 [wrapper] pandaids: 6678907460
[2025-06-04 10:53:46] 2025-06-04 14:53:46,783 [wrapper] cleanup supervisor_pilot 4070030 3840346
[2025-06-04 10:53:46] 2025-06-04 14:53:46,786 [wrapper] Test setup, not cleaning
[2025-06-04 10:53:46] 2025-06-04 14:53:46,789 [wrapper] apfmon messages muted
[2025-06-04 10:53:46] 2025-06-04 14:53:46,791 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:53:46] 2025-06-04 14:53:46,793 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:53:46]  *** Error codes and diagnostics ***
[2025-06-04 10:53:46]     "exeErrorCode": 0,
[2025-06-04 10:53:46]     "exeErrorDiag": "",
[2025-06-04 10:53:46]     "pilotErrorCode": 0,
[2025-06-04 10:53:46]     "pilotErrorDiag": "",
[2025-06-04 10:53:46]  *** Listing of results directory ***
[2025-06-04 10:53:46] total 391380
[2025-06-04 10:53:46] -rwx------. 1 boincer umatlas     37140 Jun  4 04:31 runpilot2-wrapper.sh
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 04:31 pilot3.tar.gz
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 04:32 queuedata.json
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:53:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:51 run_atlas
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:51 job.xml
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas 214682708 Jun  4 09:51 EVNT.45006593._000381.pool.root.1
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 10:53:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:51 shared
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 09:51 input.tar.gz
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:51 boinc_lockfile
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 09:51 pandaJob.out
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas    986819 Jun  4 09:51 agis_schedconf.cvmfs.json
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:53:46] drwx------. 4 boincer umatlas      4096 Jun  4 09:51 pilot3
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 10:45 init_data.xml
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas        95 Jun  4 10:52 pilot_heartbeat.json
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas 180905423 Jun  4 10:52 HITS.45006595._055680.pool.root.1
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:52 boinc_task_state.xml
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas      1040 Jun  4 10:53 memory_monitor_summary.json
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas    303175 Jun  4 10:53 log.45006595._055680.job.log.tgz.1
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas      7720 Jun  4 10:53 heartbeat.json
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:53 wrapper_checkpoint.txt
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas      4425 Jun  4 10:53 pilotlog.txt
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas    375918 Jun  4 10:53 log.45006595._055680.job.log.1
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:53 boinc_mmap_file
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas       357 Jun  4 10:53 output.list
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:53 runtime_log
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas    696320 Jun  4 10:53 result.tar.gz
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 10:53 runtime_log.err
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas       653 Jun  4 10:53 2NTNDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4mnKDmQJJbEn.diag
[2025-06-04 10:53:46] -rw-r--r--. 1 boincer umatlas     21481 Jun  4 10:53 stderr.txt
[2025-06-04 10:53:46] HITS file was successfully produced:
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas 180905423 Jun  4 10:52 shared/HITS.pool.root.1
[2025-06-04 10:53:46]  *** Contents of shared directory: ***
[2025-06-04 10:53:46] total 387520
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas 214682708 Jun  4 09:51 ATLAS.root_0
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:51 start_atlas.sh
[2025-06-04 10:53:46] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 09:51 input.tar.gz
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas 180905423 Jun  4 10:52 HITS.pool.root.1
[2025-06-04 10:53:46] -rw-------. 1 boincer umatlas    696320 Jun  4 10:53 result.tar.gz
10:53:48 (3836552): run_atlas exited; CPU time 24675.215361
10:53:48 (3836552): called boinc_finish(0)

</stderr_txt>
]]>

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