Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:11 (2477521): wrapper (7.7.26015): starting
09:46:11 (2477521): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:46:11] Arguments: --nthreads 8
[2025-06-04 09:46:11] Threads: 8
[2025-06-04 09:46:11] Checking for CVMFS
[2025-06-04 09:46:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:46:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:46:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:46:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:46:11] 2.12.6.0 5676 1417 237044 146781 0 461 27476447 32935937 11713 16776704 0 17541194 99.898 6169946 55769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:46:11] CVMFS is ok
[2025-06-04 09:46:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:46:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:46:11] Further information can be found at the LHC@home message board.
[2025-06-04 09:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:46:11] Checking for apptainer binary...
[2025-06-04 09:46:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:46:11] Running /usr/bin/apptainer --version
[2025-06-04 09:46:12] apptainer version 1.4.1-1.el9
[2025-06-04 09:46:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:46:12] c7-3-28.aglt2.org
[2025-06-04 09:46:12] apptainer works
[2025-06-04 09:46:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:46:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:46:12] Starting ATLAS job with PandaID=6678364562
[2025-06-04 09:46:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:42:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:42:49]  guid=14ae6fe7-ad10-407a-b4ae-ca4beed680a8
[2025-06-04 10:42:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:42:49]  is_altstaged=None
[2025-06-04 10:42:49]  is_tar=False
[2025-06-04 10:42:49]  lfn=log.45006595._054046.job.log.tgz.1
[2025-06-04 10:42:49]  mtime=0
[2025-06-04 10:42:49]  protocol_id=None
[2025-06-04 10:42:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:42:49]  replicas=None
[2025-06-04 10:42:49]  scope=mc23_13p6TeV
[2025-06-04 10:42:49]  status=None
[2025-06-04 10:42:49]  status_code=0
[2025-06-04 10:42:49]  storage_token=
[2025-06-04 10:42:49]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678364562/log.45006595._054046.job.log.tgz.1
[2025-06-04 10:42:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/f3/log.45006595._054046.job.log.tgz.1
[2025-06-04 10:42:49]  workdir=None
[2025-06-04 10:42:49] ]
[2025-06-04 10:42:49] 2025-06-04 14:42:33,180 | INFO     | transferring file log.45006595._054046.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678364562/log.45006595._054046.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:42:49] 2025-06-04 14:42:33,180 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678364562/log.45006595._054046.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054046.job
[2025-06-04 10:42:49] 2025-06-04 14:42:33,200 | INFO     | adding to output.list: log.45006595._054046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/f3/log.45006595._054046.job.log.tg
[2025-06-04 10:42:49] 2025-06-04 14:42:33,200 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:42:49] 2025-06-04 14:42:33,200 | INFO     | summary of transferred files:
[2025-06-04 10:42:49] 2025-06-04 14:42:33,200 | INFO     |  -- lfn=log.45006595._054046.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:42:49] 2025-06-04 14:42:33,201 | INFO     | stage-out finished correctly
[2025-06-04 10:42:49] 2025-06-04 14:42:33,418 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:42:49] 2025-06-04 14:42:34,162 | INFO     | job 6678364562 has state=finished
[2025-06-04 10:42:49] 2025-06-04 14:42:34,162 | INFO     | preparing for final server update for job 6678364562 in state='finished'
[2025-06-04 10:42:49] 2025-06-04 14:42:34,162 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:42:49] 2025-06-04 14:42:34,162 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:42:49] 2025-06-04 14:42:34,162 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:42:49] 2025-06-04 14:42:34,163 | INFO     | job 6678364562 has finished - writing final server update
[2025-06-04 10:42:49] 2025-06-04 14:42:34,163 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:42:49] 2025-06-04 14:42:34,181 | INFO     | executing command: lscpu
[2025-06-04 10:42:49] 2025-06-04 14:42:34,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:42:49] 2025-06-04 14:42:34,855 | INFO     | monitor loop #251: job 0:6678364562 is in state 'finished'
[2025-06-04 10:42:49] 2025-06-04 14:42:34,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,359 | INFO     | monitor loop #252: job 0:6678364562 is in state 'finished'
[2025-06-04 10:42:49] 2025-06-04 14:42:37,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,796 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:42:49] 2025-06-04 14:42:37,797 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678364562/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,798 | INFO     | extracted standard info from prmon json
[2025-06-04 10:42:49] 2025-06-04 14:42:37,798 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:42:49] 2025-06-04 14:42:37,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:42:49] 2025-06-04 14:42:37,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:42:49] 2025-06-04 14:42:37,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | sum of deviations: 7346982404.5
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | mean x: 1749046548.5
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | mean y: 2203500.6041666665
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | -- intersect: -374881678268.91144
[2025-06-04 10:42:49] 2025-06-04 14:42:37,799 | INFO     | intersect: -374881678268.91144
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | chi2: 0.810391821853165
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | -- intersect: -374881678268.91144
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | current memory leak: 214.34 B/s (using 48 data points, chi2=0.81)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | ..............................
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . Timing measurements:
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . get job = 0 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . initial setup = 2 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . payload setup = 6 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . stage-in = 0 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . payload execution = 3343 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . stage-out = 0 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | . log creation = 0 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,800 | INFO     | ..............................
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | 
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | job summary report
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | --------------------------------------------------
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | PanDA job id: 6678364562
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | task id: 45006595
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | errors: (none)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | pilot state: finished 
[2025-06-04 10:42:49] 2025-06-04 14:42:37,842 | INFO     | transexitcode: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | exeerrorcode: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | exeerrordiag: 
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | exitcode: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | exitmsg: OK
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | cpuconsumptiontime: 21463 s
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | nevents: 400
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | neventsw: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | pid: 2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | pgrp: 2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | corecount: 8
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | event service: False
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 3354: 2423178, 3355: 2432303, 3360: 2432417}
[2025-06-04 10:42:49] 2025-06-04 14:42:37,843 | INFO     | --------------------------------------------------
[2025-06-04 10:42:49] 2025-06-04 14:42:37,844 | INFO     | 
[2025-06-04 10:42:49] 2025-06-04 14:42:37,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:42:49] 2025-06-04 14:42:37,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | job 6678364562 has completed (purged errors)
[2025-06-04 10:42:49] 2025-06-04 14:42:37,862 | INFO     | overall cleanup function is called
[2025-06-04 10:42:49] 2025-06-04 14:42:38,869 | INFO     | --- collectZombieJob: --- 10, [2488520]
[2025-06-04 10:42:49] 2025-06-04 14:42:38,869 | INFO     | zombie collector waiting for pid 2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:38,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:42:49] 2025-06-04 14:42:38,870 | INFO     | collected zombie processes
[2025-06-04 10:42:49] 2025-06-04 14:42:38,870 | INFO     | will attempt to kill all subprocesses of pid=2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:39,205 | INFO     | process IDs to be killed: [2488520] (in reverse order)
[2025-06-04 10:42:49] 2025-06-04 14:42:39,285 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:42:49] 2025-06-04 14:42:39,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:42:49] 2025-06-04 14:42:39,307 | INFO     | did not find any defunct processes belonging to 2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:39,325 | INFO     | did not find any defunct processes belonging to 2488520
[2025-06-04 10:42:49] 2025-06-04 14:42:39,326 | INFO     | ready for new job
[2025-06-04 10:42:49] 2025-06-04 14:42:39,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:42:49] 2025-06-04 14:42:39,329 | INFO     | **************************************
[2025-06-04 10:42:49] 2025-06-04 14:42:39,329 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:42:49] 2025-06-04 14:42:39,329 | INFO     | **************************************
[2025-06-04 10:42:49] 2025-06-04 14:42:39,329 | INFO     | 
[2025-06-04 10:42:49] 2025-06-04 14:42:39,346 | INFO     | architecture information:
[2025-06-04 10:42:49] 2025-06-04 14:42:39,347 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:42:49] 2025-06-04 14:42:39,367 | INFO     | cat /etc/os-release:
[2025-06-04 10:42:49] NAME="CentOS Linux"
[2025-06-04 10:42:49] VERSION="7 (Core)"
[2025-06-04 10:42:49] ID="centos"
[2025-06-04 10:42:49] ID_LIKE="rhel fedora"
[2025-06-04 10:42:49] VERSION_ID="7"
[2025-06-04 10:42:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:42:49] ANSI_COLOR="0;31"
[2025-06-04 10:42:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:42:49] HOME_URL="https://www.centos.org/"
[2025-06-04 10:42:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:42:49] 
[2025-06-04 10:42:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:42:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:42:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:42:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:42:49] 
[2025-06-04 10:42:49] 2025-06-04 14:42:39,368 | INFO     | **************************************
[2025-06-04 10:42:49] 2025-06-04 14:42:39,837 | INFO     | PID=2481598 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:42:49] 2025-06-04 14:42:39,837 | INFO     | .. there are 15 such processes running
[2025-06-04 10:42:49] 2025-06-04 14:42:39,871 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:42:49] 2025-06-04 14:42:39,892 | INFO     | sufficient remaining disk space (75654758400 B)
[2025-06-04 10:42:49] 2025-06-04 14:42:39,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:42:49] 2025-06-04 14:42:39,893 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:42:49] 2025-06-04 14:42:39,893 | INFO     | update_server=False
[2025-06-04 10:42:49] 2025-06-04 14:42:39,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:42:49] 2025-06-04 14:42:39,893 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:42:49] 2025-06-04 14:42:39,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:42:49] 2025-06-04 14:42:39,894 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:42:49] 2025-06-04 14:42:39,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:42:49] 2025-06-04 14:42:39,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:42:49] 2025-06-04 14:42:40,000 | INFO     | all job control threads have been joined
[2025-06-04 10:42:49] 2025-06-04 14:42:40,309 | INFO     | all data control threads have been joined
[2025-06-04 10:42:49] 2025-06-04 14:42:40,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:42:49] 2025-06-04 14:42:40,867 | INFO     | aborting loop
[2025-06-04 10:42:49] 2025-06-04 14:42:40,899 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:40,901 | INFO     | all payload control threads have been joined
[2025-06-04 10:42:49] 2025-06-04 14:42:41,006 | INFO     | [job] control thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,139 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:42:49] 2025-06-04 14:42:41,316 | INFO     | [data] control thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,385 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,680 | INFO     | [job] validate thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,847 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,873 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:41,903 | INFO     | [payload] control thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:42,018 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:42,161 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:42,325 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:42,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:42:49] 2025-06-04 14:42:43,291 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:43,852 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:43,900 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:42:49] 2025-06-04 14:42:44,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009952012096)>', '<ExcThread(monitor, started 140009449432832)>']
[2025-06-04 10:42:49] 2025-06-04 14:42:44,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:42:49] 2025-06-04 14:42:44,916 | INFO     | [monitor] control thread has ended
[2025-06-04 10:42:49] 2025-06-04 14:42:49,640 | INFO     | all workflow threads have been joined
[2025-06-04 10:42:49] 2025-06-04 14:42:49,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:42:49] 2025-06-04 14:42:49,640 | INFO     | traces error code: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:49,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:42:49] 2025-06-04 14:42:49,747 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:42:49] 2025-06-04 14:42:49,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:42:49] 2025-06-04 14:42:49,751 [wrapper] pilotpid: 2481598
[2025-06-04 10:42:49] 2025-06-04 14:42:49,753 [wrapper] Pilot exit status: 0
[2025-06-04 10:42:49] 2025-06-04 14:42:49,762 [wrapper] pandaids: 6678364562
[2025-06-04 10:42:49] 2025-06-04 14:42:49,834 [wrapper] cleanup supervisor_pilot 2636966 2481599
[2025-06-04 10:42:49] 2025-06-04 14:42:49,836 [wrapper] Test setup, not cleaning
[2025-06-04 10:42:49] 2025-06-04 14:42:49,838 [wrapper] apfmon messages muted
[2025-06-04 10:42:49] 2025-06-04 14:42:49,840 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:42:49] 2025-06-04 14:42:49,843 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:42:49]  *** Error codes and diagnostics ***
[2025-06-04 10:42:49]     "exeErrorCode": 0,
[2025-06-04 10:42:49]     "exeErrorDiag": "",
[2025-06-04 10:42:49]     "pilotErrorCode": 0,
[2025-06-04 10:42:49]     "pilotErrorDiag": "",
[2025-06-04 10:42:49]  *** Listing of results directory ***
[2025-06-04 10:42:49] total 393188
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 02:26 queuedata.json
[2025-06-04 10:42:49] -rwx------. 1 boincer umatlas     37140 Jun  4 02:26 runpilot2-wrapper.sh
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:42:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:46 run_atlas
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:46 job.xml
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas 218117560 Jun  4 09:46 EVNT.45006593._002163.pool.root.1
[2025-06-04 10:42:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:46 shared
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 09:46 input.tar.gz
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:46 boinc_lockfile
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:46 pandaJob.out
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas    986819 Jun  4 09:46 agis_schedconf.cvmfs.json
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:42:49] drwx------. 4 boincer umatlas      4096 Jun  4 09:46 pilot3
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 10:39 init_data.xml
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas 179398188 Jun  4 10:42 HITS.45006595._054046.pool.root.1
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:42 boinc_task_state.xml
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas      1026 Jun  4 10:42 memory_monitor_summary.json
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas    292384 Jun  4 10:42 log.45006595._054046.job.log.tgz.1
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas        95 Jun  4 10:42 pilot_heartbeat.json
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas      7681 Jun  4 10:42 heartbeat.json
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:42 wrapper_checkpoint.txt
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:42 boinc_mmap_file
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas      4872 Jun  4 10:42 pilotlog.txt
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas    344594 Jun  4 10:42 log.45006595._054046.job.log.1
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas       357 Jun  4 10:42 output.list
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:42 runtime_log
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas    655360 Jun  4 10:42 result.tar.gz
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas       650 Jun  4 10:42 ybxLDm3kwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzqaKDmnzRDfm.diag
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:42 runtime_log.err
[2025-06-04 10:42:49] -rw-r--r--. 1 boincer umatlas     21389 Jun  4 10:42 stderr.txt
[2025-06-04 10:42:49] HITS file was successfully produced:
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas 179398188 Jun  4 10:42 shared/HITS.pool.root.1
[2025-06-04 10:42:49]  *** Contents of shared directory: ***
[2025-06-04 10:42:49] total 389368
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas 218117560 Jun  4 09:46 ATLAS.root_0
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 09:46 input.tar.gz
[2025-06-04 10:42:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas 179398188 Jun  4 10:42 HITS.pool.root.1
[2025-06-04 10:42:49] -rw-------. 1 boincer umatlas    655360 Jun  4 10:42 result.tar.gz
10:42:51 (2477521): run_atlas exited; CPU time 21552.704977
10:42:51 (2477521): called boinc_finish(0)

</stderr_txt>
]]>

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