Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:43 (12590): wrapper (7.7.26015): starting
23:47:43 (12590): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:47:43] Arguments: --nthreads 8
[2025-06-04 23:47:43] Threads: 8
[2025-06-04 23:47:43] Checking for CVMFS
[2025-06-04 23:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:47:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:47:45] 2.11.2.0 20077 33934 93444 146795 2 60 19173749 25165824 3521 130560 0 17203028 99.764 19337030 1979 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:47:45] CVMFS is ok
[2025-06-04 23:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:47:45] Checking for apptainer binary...
[2025-06-04 23:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:47:45] Running /usr/bin/apptainer --version
[2025-06-04 23:47:45] apptainer version 1.3.2-1.el7
[2025-06-04 23:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:47:52] cg-vwn315.simple-grid.lan
[2025-06-04 23:47:52] apptainer works
[2025-06-04 23:47:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:47:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:47:52] Starting ATLAS job with PandaID=6667883193
[2025-06-04 23:47:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:28:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:28:44] 2025-06-05 03:42:43,304 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6667883193/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,305 | INFO     | extracted standard info from prmon json
[2025-06-05 06:28:44] 2025-06-05 03:42:43,305 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:28:44] 2025-06-05 03:42:43,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:28:44] 2025-06-05 03:42:43,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:28:44] 2025-06-05 03:42:43,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:28:44] 2025-06-05 03:42:43,313 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:28:44] 2025-06-05 03:42:43,314 | INFO     | sum of square deviations: 11867638328.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,317 | INFO     | sum of deviations: 143082684884.99997
[2025-06-05 06:28:44] 2025-06-05 03:42:43,318 | INFO     | mean x: 1749084610.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,318 | INFO     | mean y: 2440788.050445104
[2025-06-05 06:28:44] 2025-06-05 03:42:43,318 | INFO     | -- intersect: -21085472002.4305
[2025-06-05 06:28:44] 2025-06-05 03:42:43,318 | INFO     | intersect: -21085472002.4305
[2025-06-05 06:28:44] 2025-06-05 03:42:43,319 | INFO     | chi2: 7.374566856626361
[2025-06-05 06:28:44] 2025-06-05 03:42:43,320 | INFO     | sum of square deviations: 11347200663.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,323 | INFO     | sum of deviations: 186455836995.5
[2025-06-05 06:28:44] 2025-06-05 03:42:43,324 | INFO     | mean x: 1749084457.5
[2025-06-05 06:28:44] 2025-06-05 03:42:43,324 | INFO     | mean y: 2453376.9789156625
[2025-06-05 06:28:44] 2025-06-05 03:42:43,324 | INFO     | -- intersect: -28738292132.386242
[2025-06-05 06:28:44] 2025-06-05 03:42:43,324 | INFO     | intersect: -28738292132.386242
[2025-06-05 06:28:44] 2025-06-05 03:42:43,325 | INFO     | chi2: 5.792442699166462
[2025-06-05 06:28:44] 2025-06-05 03:42:43,325 | INFO     | current chi2=5.792442699166462 (change=21.4537909577468 %)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,325 | INFO     | right removable region: 331
[2025-06-05 06:28:44] 2025-06-05 03:42:43,326 | INFO     | sum of square deviations: 11347200663.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,329 | INFO     | sum of deviations: 26556820188.000004
[2025-06-05 06:28:44] 2025-06-05 03:42:43,330 | INFO     | mean x: 1749084762.5
[2025-06-05 06:28:44] 2025-06-05 03:42:43,330 | INFO     | mean y: 2474911.3192771086
[2025-06-05 06:28:44] 2025-06-05 03:42:43,330 | INFO     | -- intersect: -4091057133.3500195
[2025-06-05 06:28:44] 2025-06-05 03:42:43,330 | INFO     | intersect: -4091057133.3500195
[2025-06-05 06:28:44] 2025-06-05 03:42:43,330 | INFO     | chi2: 2.789330333383047
[2025-06-05 06:28:44] 2025-06-05 03:42:43,331 | INFO     | current chi2=2.789330333383047 (change=62.176350318436455 %)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,331 | INFO     | sum of square deviations: 10842205148.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,335 | INFO     | sum of deviations: -23733934228.999996
[2025-06-05 06:28:44] 2025-06-05 03:42:43,335 | INFO     | mean x: 1749084915.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,335 | INFO     | mean y: 2490034.519877676
[2025-06-05 06:28:44] 2025-06-05 03:42:43,335 | INFO     | -- intersect: 3831292917.963165
[2025-06-05 06:28:44] 2025-06-05 03:42:43,335 | INFO     | intersect: 3831292917.963165
[2025-06-05 06:28:44] 2025-06-05 03:42:43,336 | INFO     | chi2: 1.7820630889404092
[2025-06-05 06:28:44] 2025-06-05 03:42:43,336 | INFO     | current chi2=1.7820630889404092 (change=36.11143622494403 %)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,337 | INFO     | sum of square deviations: 10352419220.5
[2025-06-05 06:28:44] 2025-06-05 03:42:43,340 | INFO     | sum of deviations: -39524072301.49999
[2025-06-05 06:28:44] 2025-06-05 03:42:43,341 | INFO     | mean x: 1749085067.5
[2025-06-05 06:28:44] 2025-06-05 03:42:43,341 | INFO     | mean y: 2494962.5186335403
[2025-06-05 06:28:44] 2025-06-05 03:42:43,341 | INFO     | -- intersect: 6680254353.526479
[2025-06-05 06:28:44] 2025-06-05 03:42:43,341 | INFO     | intersect: 6680254353.526479
[2025-06-05 06:28:44] 2025-06-05 03:42:43,342 | INFO     | chi2: 1.6877310752678665
[2025-06-05 06:28:44] 2025-06-05 03:42:43,342 | INFO     | current chi2=1.6877310752678665 (change=5.293416055692578 %)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,342 | INFO     | left removable region: 30
[2025-06-05 06:28:44] 2025-06-05 03:42:43,342 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,346 | INFO     | sum of deviations: 725278959.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,346 | INFO     | mean x: 1749085342.0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,346 | INFO     | mean y: 2510254.4584717606
[2025-06-05 06:28:44] 2025-06-05 03:42:43,346 | INFO     | -- intersect: -147507603.95170656
[2025-06-05 06:28:44] 2025-06-05 03:42:43,346 | INFO     | intersect: -147507603.95170656
[2025-06-05 06:28:44] 2025-06-05 03:42:43,347 | INFO     | chi2: 0.007567090654700978
[2025-06-05 06:28:44] 2025-06-05 03:42:43,347 | INFO     | -- intersect: -147507603.95170656
[2025-06-05 06:28:44] 2025-06-05 03:42:43,347 | INFO     | current memory leak: 0.09 B/s (using 301 data points, chi2=0.01)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,348 | INFO     | ..............................
[2025-06-05 06:28:44] 2025-06-05 03:42:43,349 | INFO     | . Timing measurements:
[2025-06-05 06:28:44] 2025-06-05 03:42:43,349 | INFO     | . get job = 0 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,349 | INFO     | . initial setup = 6 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,353 | INFO     | . payload setup = 167 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,353 | INFO     | . stage-in = 0 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,353 | INFO     | . payload execution = 20659 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,354 | INFO     | . stage-out = 3 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,354 | INFO     | . log creation = 1 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,354 | INFO     | ..............................
[2025-06-05 06:28:44] 2025-06-05 03:42:43,526 | INFO     | 
[2025-06-05 06:28:44] 2025-06-05 03:42:43,526 | INFO     | job summary report
[2025-06-05 06:28:44] 2025-06-05 03:42:43,526 | INFO     | --------------------------------------------------
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | PanDA job id: 6667883193
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | task id: 44871837
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | errors: (none)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | pilot state: finished 
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | transexitcode: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | exeerrorcode: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | exeerrordiag: 
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | exitcode: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | exitmsg: OK
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | cpuconsumptiontime: 75552 s
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | nevents: 400
[2025-06-05 06:28:44] 2025-06-05 03:42:43,527 | INFO     | neventsw: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | pid: 24917
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | pgrp: 24917
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | corecount: 8
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | event service: False
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | sizes: {0: 2397222, 1: 2397421, 12: 2397421, 23: 2397449, 33: 2397477, 44: 2397533, 55: 2397689, 66: 2397717, 76: 2397745, 84: 2398007, 87: 2398035, 20830: 2430928
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | --------------------------------------------------
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | 
[2025-06-05 06:28:44] 2025-06-05 03:42:43,528 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-05 06:28:44] 2025-06-05 03:42:43,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:28:44] 2025-06-05 03:42:43,925 | INFO     | job 6667883193 has completed (purged errors)
[2025-06-05 06:28:44] 2025-06-05 03:42:43,925 | INFO     | overall cleanup function is called
[2025-06-05 06:28:44] 2025-06-05 03:42:44,934 | INFO     | --- collectZombieJob: --- 10, [24917]
[2025-06-05 06:28:44] 2025-06-05 03:42:44,934 | INFO     | zombie collector waiting for pid 24917
[2025-06-05 06:28:44] 2025-06-05 03:42:44,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:28:44] 2025-06-05 03:42:44,935 | INFO     | collected zombie processes
[2025-06-05 06:28:44] 2025-06-05 03:42:44,935 | INFO     | will attempt to kill all subprocesses of pid=24917
[2025-06-05 06:28:44] 2025-06-05 03:42:45,041 | INFO     | process IDs to be killed: [24917] (in reverse order)
[2025-06-05 06:28:44] 2025-06-05 03:42:45,137 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:28:44] 2025-06-05 03:42:45,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:28:44] 2025-06-05 03:42:45,141 | INFO     | did not find any defunct processes belonging to 24917
[2025-06-05 06:28:44] 2025-06-05 03:42:45,145 | INFO     | did not find any defunct processes belonging to 24917
[2025-06-05 06:28:44] 2025-06-05 03:42:45,145 | INFO     | ready for new job
[2025-06-05 06:28:44] 2025-06-05 03:42:45,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:28:44] 2025-06-05 03:42:45,148 | INFO     | **************************************
[2025-06-05 06:28:44] 2025-06-05 03:42:45,148 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:28:44] 2025-06-05 03:42:45,148 | INFO     | **************************************
[2025-06-05 06:28:44] 2025-06-05 03:42:45,148 | INFO     | 
[2025-06-05 06:28:44] 2025-06-05 03:42:45,149 | INFO     | pilot is running in a VM
[2025-06-05 06:28:44] 2025-06-05 03:42:45,149 | INFO     | architecture information:
[2025-06-05 06:28:44] 2025-06-05 03:42:45,150 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:28:44] 2025-06-05 03:42:45,176 | INFO     | cat /etc/os-release:
[2025-06-05 06:28:44] NAME="CentOS Linux"
[2025-06-05 06:28:44] VERSION="7 (Core)"
[2025-06-05 06:28:44] ID="centos"
[2025-06-05 06:28:44] ID_LIKE="rhel fedora"
[2025-06-05 06:28:44] VERSION_ID="7"
[2025-06-05 06:28:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:28:44] ANSI_COLOR="0;31"
[2025-06-05 06:28:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:28:44] HOME_URL="https://www.centos.org/"
[2025-06-05 06:28:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:28:44] 
[2025-06-05 06:28:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:28:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:28:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:28:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:28:44] 
[2025-06-05 06:28:44] 2025-06-05 03:42:45,177 | INFO     | **************************************
[2025-06-05 06:28:44] 2025-06-05 03:42:45,680 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-05 06:28:44] 2025-06-05 03:42:45,885 | INFO     | sufficient remaining disk space (497296605184 B)
[2025-06-05 06:28:44] 2025-06-05 03:42:45,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:28:44] 2025-06-05 03:42:45,885 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:28:44] 2025-06-05 03:42:45,886 | INFO     | update_server=False
[2025-06-05 06:28:44] 2025-06-05 03:42:45,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:28:44] 2025-06-05 03:42:45,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:28:44] 2025-06-05 03:42:45,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:28:44] 2025-06-05 03:42:45,895 | INFO     | aborting loop
[2025-06-05 06:28:44] 2025-06-05 03:42:46,405 | INFO     | all payload control threads have been joined
[2025-06-05 06:28:44] 2025-06-05 03:42:46,687 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:28:44] 2025-06-05 03:42:46,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:28:44] 2025-06-05 03:42:46,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:28:44] 2025-06-05 03:42:46,701 | INFO     | all data control threads have been joined
[2025-06-05 06:28:44] 2025-06-05 03:42:46,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:28:44] 2025-06-05 03:42:46,892 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:46,901 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:46,939 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,112 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,113 | INFO     | all job control threads have been joined
[2025-06-05 06:28:44] 2025-06-05 03:42:47,251 | INFO     | [job] validate thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,412 | INFO     | [payload] control thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,519 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,547 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,603 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:47,707 | INFO     | [data] control thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:48,042 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:48,119 | INFO     | [job] control thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:48,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:28:44] 2025-06-05 03:42:48,754 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:49,546 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:49,896 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:28:44] 2025-06-05 03:42:50,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067373283136)>', '<ExcThread(monitor, started 140067146393344)>']
[2025-06-05 06:28:44] 2025-06-05 03:42:50,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:28:44] 2025-06-05 03:42:50,712 | INFO     | [monitor] control thread has ended
[2025-06-05 06:28:44] 2025-06-05 03:42:55,177 | INFO     | all workflow threads have been joined
[2025-06-05 06:28:44] 2025-06-05 03:42:55,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:28:44] 2025-06-05 03:42:55,178 | INFO     | traces error code: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:55,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:28:44] 2025-06-05 03:42:55,530 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:28:44] 2025-06-05 03:42:55,642 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:28:44] 2025-06-05 03:42:55,764 [wrapper] pilotpid: 18293
[2025-06-05 06:28:44] 2025-06-05 03:42:55,849 [wrapper] Pilot exit status: 0
[2025-06-05 06:28:44] 2025-06-05 03:42:56,142 [wrapper] pandaids: 6667883193
[2025-06-05 06:28:44] 2025-06-05 03:42:57,065 [wrapper] cleanup supervisor_pilot 15005 18294
[2025-06-05 06:28:44] 2025-06-05 03:42:57,115 [wrapper] Test setup, not cleaning
[2025-06-05 06:28:44] 2025-06-05 03:42:57,203 [wrapper] apfmon messages muted
[2025-06-05 06:28:44] 2025-06-05 03:42:57,252 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:28:44] 2025-06-05 03:42:57,313 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:28:44]  *** Error codes and diagnostics ***
[2025-06-05 06:28:44]     "exeErrorCode": 0,
[2025-06-05 06:28:44]     "exeErrorDiag": "",
[2025-06-05 06:28:44]     "pilotErrorCode": 0,
[2025-06-05 06:28:44]     "pilotErrorDiag": "",
[2025-06-05 06:28:44]  *** Listing of results directory ***
[2025-06-05 06:28:44] total 420744
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc    495897 May 28 02:38 pilot3.tar.gz
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc      5111 May 28 03:16 queuedata.json
[2025-06-05 06:28:44] -rwx------. 1 boinc boinc     37140 May 28 03:17 runpilot2-wrapper.sh
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:28:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:47 run_atlas
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:47 job.xml
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc      6391 Jun  4 23:47 init_data.xml
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc 223784388 Jun  4 23:47 EVNT.44871834._002992.pool.root.1
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:47 start_atlas.sh
[2025-06-05 06:28:44] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:47 shared
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc    508883 Jun  4 23:47 input.tar.gz
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:47 boinc_lockfile
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc      2559 Jun  4 23:47 pandaJob.out
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc    987032 Jun  4 23:50 agis_schedconf.cvmfs.json
[2025-06-05 06:28:44] drwx------. 4 boinc boinc      4096 Jun  4 23:51 pilot3
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc 198751792 Jun  5 05:39 HITS.44871837._076498.pool.root.1
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:39 boinc_task_state.xml
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc      1020 Jun  5 05:41 memory_monitor_summary.json
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc   1598969 Jun  5 05:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc    449734 Jun  5 05:41 log.44871837._076498.job.log.tgz.1
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc        95 Jun  5 05:42 pilot_heartbeat.json
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc      7695 Jun  5 05:42 heartbeat.json
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc      4417 Jun  5 05:42 pilotlog.txt
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc   1793042 Jun  5 05:42 log.44871837._076498.job.log.1
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc       357 Jun  5 05:42 output.list
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:42 runtime_log
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc   2263040 Jun  5 05:42 result.tar.gz
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc      8673 Jun  5 05:42 runtime_log.err
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc       658 Jun  5 05:42 3a8MDmXbKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKiSKDmuLEsqm.diag
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:28 boinc_mmap_file
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:28 wrapper_checkpoint.txt
[2025-06-05 06:28:44] -rw-r--r--. 1 boinc boinc     20539 Jun  5 06:28 stderr.txt
[2025-06-05 06:28:44] HITS file was successfully produced:
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc 198751792 Jun  5 05:39 shared/HITS.pool.root.1
[2025-06-05 06:28:44]  *** Contents of shared directory: ***
[2025-06-05 06:28:44] total 415364
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc 223784388 Jun  4 23:47 ATLAS.root_0
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:47 start_atlas.sh
[2025-06-05 06:28:44] -rw-r--r--. 2 boinc boinc    508883 Jun  4 23:47 input.tar.gz
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc 198751792 Jun  5 05:39 HITS.pool.root.1
[2025-06-05 06:28:44] -rw-------. 1 boinc boinc   2263040 Jun  5 05:42 result.tar.gz
06:28:46 (12590): run_atlas exited; CPU time 75839.645499
06:28:46 (12590): called boinc_finish(0)

</stderr_txt>
]]>

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