Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:41:48 (83661): wrapper (7.7.26015): starting
09:41:48 (83661): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:41:48] Arguments: --nthreads 8
[2025-06-04 09:41:48] Threads: 8
[2025-06-04 09:41:48] Checking for CVMFS
[2025-06-04 09:41:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:41:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:41:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:41:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:41:48] 2.11.2.0 12263 11210 299592 146781 3 290 17766108 18432000 18501 130560 0 86792591 99.313 113400349 59226 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:41:48] CVMFS is ok
[2025-06-04 09:41:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:41:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:41:48] Further information can be found at the LHC@home message board.
[2025-06-04 09:41:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:41:48] Checking for apptainer binary...
[2025-06-04 09:41:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:41:48] Running /usr/bin/apptainer --version
[2025-06-04 09:41:49] apptainer version 1.3.2-1.el7
[2025-06-04 09:41:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:41:50] c-212-14.aglt2.org
[2025-06-04 09:41:50] apptainer works
[2025-06-04 09:41:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:41:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:41:50] Starting ATLAS job with PandaID=6678287083
[2025-06-04 09:41:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:46:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:46:34]  scope=mc23_13p6TeV
[2025-06-04 10:46:34]  status=None
[2025-06-04 10:46:34]  status_code=0
[2025-06-04 10:46:34]  storage_token=
[2025-06-04 10:46:34]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6678287083/log.45006595._051730.job.log.tgz.1
[2025-06-04 10:46:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/a8/log.45006595._051730.job.log.tgz.1
[2025-06-04 10:46:34]  workdir=None
[2025-06-04 10:46:34] ]
[2025-06-04 10:46:34] 2025-06-04 14:45:58,897 | INFO     | transferring file log.45006595._051730.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6678287083/log.45006595._051730.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:46:34] 2025-06-04 14:45:58,897 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6678287083/log.45006595._051730.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._051730.job
[2025-06-04 10:46:34] 2025-06-04 14:45:58,917 | INFO     | adding to output.list: log.45006595._051730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/a8/log.45006595._051730.job.log.tg
[2025-06-04 10:46:34] 2025-06-04 14:45:58,918 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:46:34] 2025-06-04 14:45:58,918 | INFO     | summary of transferred files:
[2025-06-04 10:46:34] 2025-06-04 14:45:58,918 | INFO     |  -- lfn=log.45006595._051730.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:46:34] 2025-06-04 14:45:58,918 | INFO     | stage-out finished correctly
[2025-06-04 10:46:34] 2025-06-04 14:45:59,266 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:46:34] 2025-06-04 14:46:00,029 | INFO     | monitor loop #288: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:00,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | job 6678287083 has state=finished
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | preparing for final server update for job 6678287083 in state='finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:46:34] 2025-06-04 14:46:01,242 | INFO     | job 6678287083 has finished - writing final server update
[2025-06-04 10:46:34] 2025-06-04 14:46:01,243 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:46:34] 2025-06-04 14:46:01,246 | INFO     | executing command: lscpu
[2025-06-04 10:46:34] 2025-06-04 14:46:01,308 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:46:34] 2025-06-04 14:46:02,536 | INFO     | monitor loop #289: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:02,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:04,559 | INFO     | PID=91423 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:46:34] 2025-06-04 14:46:04,559 | INFO     | .. there are 25 such processes running
[2025-06-04 10:46:34] 2025-06-04 14:46:05,041 | INFO     | monitor loop #290: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:05,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:07,544 | INFO     | monitor loop #291: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:07,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:10,047 | INFO     | monitor loop #292: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:10,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:12,550 | INFO     | monitor loop #293: job 0:6678287083 is in state 'finished'
[2025-06-04 10:46:34] 2025-06-04 14:46:12,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,412 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:46:34] 2025-06-04 14:46:13,413 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6678287083/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,413 | INFO     | extracted standard info from prmon json
[2025-06-04 10:46:34] 2025-06-04 14:46:13,413 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:46:34] 2025-06-04 14:46:13,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:46:34] 2025-06-04 14:46:13,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:46:34] 2025-06-04 14:46:13,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:46:34] 2025-06-04 14:46:13,415 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:46:34] 2025-06-04 14:46:13,415 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | sum of deviations: -1420443926.0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | mean x: 1749046554.5
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | mean y: 2543036.535714286
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | -- intersect: 45640003230.05694
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | intersect: 45640003230.05694
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | chi2: 0.0017371700426900784
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | -- intersect: 45640003230.05694
[2025-06-04 10:46:34] 2025-06-04 14:46:13,416 | INFO     | current memory leak: -26.09 B/s (using 56 data points, chi2=0.00)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | ..............................
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . Timing measurements:
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . get job = 0 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . initial setup = 2 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . payload setup = 12 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . stage-in = 0 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . payload execution = 3795 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . stage-out = 0 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | . log creation = 0 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,417 | INFO     | ..............................
[2025-06-04 10:46:34] 2025-06-04 14:46:13,495 | INFO     | 
[2025-06-04 10:46:34] 2025-06-04 14:46:13,495 | INFO     | job summary report
[2025-06-04 10:46:34] 2025-06-04 14:46:13,495 | INFO     | --------------------------------------------------
[2025-06-04 10:46:34] 2025-06-04 14:46:13,495 | INFO     | PanDA job id: 6678287083
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | task id: 45006595
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | errors: (none)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | pilot state: finished 
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | transexitcode: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | exeerrorcode: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | exeerrordiag: 
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | exitcode: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | exitmsg: OK
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | cpuconsumptiontime: 27319 s
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | nevents: 400
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | neventsw: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | pid: 98208
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | pgrp: 98208
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | corecount: 8
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | event service: False
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | sizes: {0: 2397336, 9: 2397542, 10: 2397570, 3811: 2423144, 3812: 2432085, 3813: 2432141, 3827: 2432439}
[2025-06-04 10:46:34] 2025-06-04 14:46:13,496 | INFO     | --------------------------------------------------
[2025-06-04 10:46:34] 2025-06-04 14:46:13,497 | INFO     | 
[2025-06-04 10:46:34] 2025-06-04 14:46:13,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | job 6678287083 has completed (purged errors)
[2025-06-04 10:46:34] 2025-06-04 14:46:13,515 | INFO     | overall cleanup function is called
[2025-06-04 10:46:34] 2025-06-04 14:46:14,535 | INFO     | --- collectZombieJob: --- 10, [98208]
[2025-06-04 10:46:34] 2025-06-04 14:46:14,535 | INFO     | zombie collector waiting for pid 98208
[2025-06-04 10:46:34] 2025-06-04 14:46:14,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:46:34] 2025-06-04 14:46:14,535 | INFO     | collected zombie processes
[2025-06-04 10:46:34] 2025-06-04 14:46:14,535 | INFO     | will attempt to kill all subprocesses of pid=98208
[2025-06-04 10:46:34] 2025-06-04 14:46:14,798 | INFO     | process IDs to be killed: [98208] (in reverse order)
[2025-06-04 10:46:34] 2025-06-04 14:46:14,896 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:46:34] 2025-06-04 14:46:14,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:46:34] 2025-06-04 14:46:14,904 | INFO     | did not find any defunct processes belonging to 98208
[2025-06-04 10:46:34] 2025-06-04 14:46:14,911 | INFO     | did not find any defunct processes belonging to 98208
[2025-06-04 10:46:34] 2025-06-04 14:46:14,911 | INFO     | ready for new job
[2025-06-04 10:46:34] 2025-06-04 14:46:14,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:46:34] 2025-06-04 14:46:14,912 | INFO     | **************************************
[2025-06-04 10:46:34] 2025-06-04 14:46:14,912 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:46:34] 2025-06-04 14:46:14,912 | INFO     | **************************************
[2025-06-04 10:46:34] 2025-06-04 14:46:14,913 | INFO     | 
[2025-06-04 10:46:34] 2025-06-04 14:46:14,915 | INFO     | architecture information:
[2025-06-04 10:46:34] 2025-06-04 14:46:14,916 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:46:34] 2025-06-04 14:46:14,925 | INFO     | cat /etc/os-release:
[2025-06-04 10:46:34] NAME="CentOS Linux"
[2025-06-04 10:46:34] VERSION="7 (Core)"
[2025-06-04 10:46:34] ID="centos"
[2025-06-04 10:46:34] ID_LIKE="rhel fedora"
[2025-06-04 10:46:34] VERSION_ID="7"
[2025-06-04 10:46:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:46:34] ANSI_COLOR="0;31"
[2025-06-04 10:46:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:46:34] HOME_URL="https://www.centos.org/"
[2025-06-04 10:46:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:46:34] 
[2025-06-04 10:46:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:46:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:46:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:46:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:46:34] 
[2025-06-04 10:46:34] 2025-06-04 14:46:14,925 | INFO     | **************************************
[2025-06-04 10:46:34] 2025-06-04 14:46:15,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-04 10:46:34] 2025-06-04 14:46:15,542 | INFO     | sufficient remaining disk space (104239988736 B)
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | INFO     | update_server=False
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:46:34] 2025-06-04 14:46:15,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:46:34] 2025-06-04 14:46:15,610 | INFO     | all payload control threads have been joined
[2025-06-04 10:46:34] 2025-06-04 14:46:16,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:46:34] 2025-06-04 14:46:16,095 | INFO     | aborting loop
[2025-06-04 10:46:34] 2025-06-04 14:46:16,114 | INFO     | all job control threads have been joined
[2025-06-04 10:46:34] 2025-06-04 14:46:16,326 | INFO     | all data control threads have been joined
[2025-06-04 10:46:34] 2025-06-04 14:46:16,549 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:16,611 | INFO     | [payload] control thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:16,843 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:46:34] 2025-06-04 14:46:17,101 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,119 | INFO     | [job] control thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,144 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,331 | INFO     | [data] control thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,461 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,616 | INFO     | [job] validate thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,700 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,850 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:17,928 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:18,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:46:34] 2025-06-04 14:46:18,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:46:34] 2025-06-04 14:46:19,037 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:19,519 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:22,840 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:26,108 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:46:34] 2025-06-04 14:46:27,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:46:34] 2025-06-04 14:46:29,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140179400714048)>', '<ExcThread(monitor, started 140178731558656)>']
[2025-06-04 10:46:34] 2025-06-04 14:46:29,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:46:34] 2025-06-04 14:46:29,610 | INFO     | [monitor] control thread has ended
[2025-06-04 10:46:34] 2025-06-04 14:46:34,114 | INFO     | all workflow threads have been joined
[2025-06-04 10:46:34] 2025-06-04 14:46:34,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:46:34] 2025-06-04 14:46:34,114 | INFO     | traces error code: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:34,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:46:34] 2025-06-04 14:46:34,253 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:46:34] 2025-06-04 14:46:34,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:46:34] 2025-06-04 14:46:34,271 [wrapper] pilotpid: 91423
[2025-06-04 10:46:34] 2025-06-04 14:46:34,293 [wrapper] Pilot exit status: 0
[2025-06-04 10:46:34] 2025-06-04 14:46:34,335 [wrapper] pandaids: 6678287083
[2025-06-04 10:46:34] 2025-06-04 14:46:34,426 [wrapper] cleanup supervisor_pilot 64338 91424
[2025-06-04 10:46:34] 2025-06-04 14:46:34,429 [wrapper] Test setup, not cleaning
[2025-06-04 10:46:34] 2025-06-04 14:46:34,435 [wrapper] apfmon messages muted
[2025-06-04 10:46:34] 2025-06-04 14:46:34,454 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:46:34] 2025-06-04 14:46:34,489 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:46:34]  *** Error codes and diagnostics ***
[2025-06-04 10:46:34]     "exeErrorCode": 0,
[2025-06-04 10:46:34]     "exeErrorDiag": "",
[2025-06-04 10:46:34]     "pilotErrorCode": 0,
[2025-06-04 10:46:34]     "pilotErrorDiag": "",
[2025-06-04 10:46:34]  *** Listing of results directory ***
[2025-06-04 10:46:34] total 390116
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 23:29 pilot3.tar.gz
[2025-06-04 10:46:34] -rwx------ 1 boincer umatlas     37140 Jun  3 23:39 runpilot2-wrapper.sh
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:39 queuedata.json
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:46:34] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:41 run_atlas
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:41 job.xml
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas 216244561 Jun  4 09:41 EVNT.45006593._002073.pool.root.1
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:46:34] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:41 shared
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:41 input.tar.gz
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:41 boinc_lockfile
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas      2522 Jun  4 09:41 pandaJob.out
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas    986819 Jun  4 09:42 agis_schedconf.cvmfs.json
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas   1598969 Jun  4 09:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:46:34] drwx------ 4 boincer umatlas      4096 Jun  4 09:42 pilot3
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 10:38 init_data.xml
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas        95 Jun  4 10:45 pilot_heartbeat.json
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas 178066531 Jun  4 10:45 HITS.45006595._051730.pool.root.1
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas       530 Jun  4 10:45 boinc_task_state.xml
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas      1071 Jun  4 10:45 memory_monitor_summary.json
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas    281260 Jun  4 10:45 log.45006595._051730.job.log.tgz.1
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas      7739 Jun  4 10:46 heartbeat.json
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:46 boinc_mmap_file
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:46 wrapper_checkpoint.txt
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas      4549 Jun  4 10:46 pilotlog.txt
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas    386689 Jun  4 10:46 log.45006595._051730.job.log.1
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas       357 Jun  4 10:46 output.list
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:46 runtime_log
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas    686080 Jun  4 10:46 result.tar.gz
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas       658 Jun  4 10:46 V60KDmH9tg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmReaKDmFqNRxn.diag
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:46 runtime_log.err
[2025-06-04 10:46:34] -rw-r--r-- 1 boincer umatlas     21952 Jun  4 10:46 stderr.txt
[2025-06-04 10:46:34] HITS file was successfully produced:
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas 178066531 Jun  4 10:45 shared/HITS.pool.root.1
[2025-06-04 10:46:34]  *** Contents of shared directory: ***
[2025-06-04 10:46:34] total 386268
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas 216244561 Jun  4 09:41 ATLAS.root_0
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:41 start_atlas.sh
[2025-06-04 10:46:34] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 09:41 input.tar.gz
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas 178066531 Jun  4 10:45 HITS.pool.root.1
[2025-06-04 10:46:34] -rw------- 1 boincer umatlas    686080 Jun  4 10:46 result.tar.gz
10:46:35 (83661): run_atlas exited; CPU time 27285.163987
10:46:35 (83661): called boinc_finish(0)

</stderr_txt>
]]>

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