Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:43:38 (2046220): wrapper (7.7.26015): starting
09:43:38 (2046220): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:43:38] Arguments: --nthreads 8
[2025-06-04 09:43:38] Threads: 8
[2025-06-04 09:43:38] Checking for CVMFS
[2025-06-04 09:43:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:43:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:43:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:43:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:43:39] 2.12.6.0 311205 23368 545352 146781 2 258 32052538 40960000 13801 16776704 1 126985631 99.728 88369078 24935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:43:39] CVMFS is ok
[2025-06-04 09:43:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:43:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:43:39] Further information can be found at the LHC@home message board.
[2025-06-04 09:43:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:43:39] Checking for apptainer binary...
[2025-06-04 09:43:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:43:39] Running /usr/bin/apptainer --version
[2025-06-04 09:43:39] apptainer version 1.4.1-1.el9
[2025-06-04 09:43:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:43:39] c7-10-13.aglt2.org
[2025-06-04 09:43:39] apptainer works
[2025-06-04 09:43:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:43:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:43:39] Starting ATLAS job with PandaID=6678286530
[2025-06-04 09:43:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:44:24]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:44:24] 2025-06-04 14:44:02,851 | INFO     | PID=2049816 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:44:24] 2025-06-04 14:44:02,851 | INFO     | .. there are 24 such processes running
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | number of running child processes to parent process 2060040: 1
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:44:24] 2025-06-04 14:44:02,855 | INFO     | job 6678286530 has state 'running' - writing heartbeat
[2025-06-04 10:44:24] 2025-06-04 14:44:02,856 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:44:24] 2025-06-04 14:44:02,871 | INFO     | executing command: lscpu
[2025-06-04 10:44:24] 2025-06-04 14:44:02,950 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:44:24] 2025-06-04 14:44:03,153 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:44:24] 2025-06-04 14:44:04,885 | INFO     | job 6678286530 has state=finished
[2025-06-04 10:44:24] 2025-06-04 14:44:04,885 | INFO     | preparing for final server update for job 6678286530 in state='finished'
[2025-06-04 10:44:24] 2025-06-04 14:44:04,885 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:44:24] 2025-06-04 14:44:04,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:44:24] 2025-06-04 14:44:04,886 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:44:24] 2025-06-04 14:44:04,886 | INFO     | job 6678286530 has finished - writing final server update
[2025-06-04 10:44:24] 2025-06-04 14:44:04,886 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:44:24] 2025-06-04 14:44:04,903 | INFO     | executing command: lscpu
[2025-06-04 10:44:24] 2025-06-04 14:44:07,340 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:44:24] 2025-06-04 14:44:07,340 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286530/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:44:24] 2025-06-04 14:44:07,348 | INFO     | extracted standard info from prmon json
[2025-06-04 10:44:24] 2025-06-04 14:44:07,348 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:44:24] 2025-06-04 14:44:07,348 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:44:24] 2025-06-04 14:44:07,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:44:24] 2025-06-04 14:44:07,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:44:24] 2025-06-04 14:44:07,351 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:44:24] 2025-06-04 14:44:07,351 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:44:24] 2025-06-04 14:44:07,352 | INFO     | sum of deviations: 1900261934.9999988
[2025-06-04 10:44:24] 2025-06-04 14:44:07,352 | INFO     | mean x: 1749046515.5
[2025-06-04 10:44:24] 2025-06-04 14:44:07,352 | INFO     | mean y: 2393493.9615384615
[2025-06-04 10:44:24] 2025-06-04 14:44:07,352 | INFO     | -- intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:07,353 | INFO     | intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:07,353 | INFO     | chi2: 0.6582662630296884
[2025-06-04 10:44:24] 2025-06-04 14:44:07,353 | INFO     | -- intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:07,353 | INFO     | current memory leak: 43.60 B/s (using 52 data points, chi2=0.66)
[2025-06-04 10:44:24] 2025-06-04 14:44:07,409 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:44:24] 2025-06-04 14:44:09,857 | INFO     | monitor loop #270: job 0:6678286530 is in state 'finished'
[2025-06-04 10:44:24] 2025-06-04 14:44:09,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:44:24] 2025-06-04 14:44:11,603 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:44:24] 2025-06-04 14:44:11,603 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286530/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:44:24] 2025-06-04 14:44:11,603 | INFO     | extracted standard info from prmon json
[2025-06-04 10:44:24] 2025-06-04 14:44:11,604 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:44:24] 2025-06-04 14:44:11,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:44:24] 2025-06-04 14:44:11,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:44:24] 2025-06-04 14:44:11,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:44:24] 2025-06-04 14:44:11,605 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:44:24] 2025-06-04 14:44:11,605 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | sum of deviations: 1900261934.9999988
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | mean x: 1749046515.5
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | mean y: 2393493.9615384615
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | -- intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | chi2: 0.6582662630296884
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | -- intersect: -76255888194.14586
[2025-06-04 10:44:24] 2025-06-04 14:44:11,606 | INFO     | current memory leak: 43.60 B/s (using 52 data points, chi2=0.66)
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | ..............................
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . Timing measurements:
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . get job = 0 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . initial setup = 2 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . payload setup = 5 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . stage-in = 0 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . payload execution = 3586 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . stage-out = 0 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | . log creation = 0 s
[2025-06-04 10:44:24] 2025-06-04 14:44:11,607 | INFO     | ..............................
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | 
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | job summary report
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | --------------------------------------------------
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | PanDA job id: 6678286530
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | task id: 45006595
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | errors: (none)
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | pilot state: finished 
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | transexitcode: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | exeerrorcode: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | exeerrordiag: 
[2025-06-04 10:44:24] 2025-06-04 14:44:11,999 | INFO     | exitcode: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | exitmsg: OK
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | cpuconsumptiontime: 24019 s
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | nevents: 400
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | neventsw: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | pid: 2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | pgrp: 2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | corecount: 8
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | event service: False
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 3595: 2432279, 3598: 2432279, 3607: 2432577}
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | --------------------------------------------------
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | 
[2025-06-04 10:44:24] 2025-06-04 14:44:12,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:44:24] 2025-06-04 14:44:12,022 | INFO     | job 6678286530 has completed (purged errors)
[2025-06-04 10:44:24] 2025-06-04 14:44:12,023 | INFO     | overall cleanup function is called
[2025-06-04 10:44:24] 2025-06-04 14:44:13,031 | INFO     | --- collectZombieJob: --- 10, [2060040]
[2025-06-04 10:44:24] 2025-06-04 14:44:13,031 | INFO     | zombie collector waiting for pid 2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:13,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:44:24] 2025-06-04 14:44:13,031 | INFO     | collected zombie processes
[2025-06-04 10:44:24] 2025-06-04 14:44:13,031 | INFO     | will attempt to kill all subprocesses of pid=2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:13,342 | INFO     | process IDs to be killed: [2060040] (in reverse order)
[2025-06-04 10:44:24] 2025-06-04 14:44:13,461 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:44:24] 2025-06-04 14:44:13,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:44:24] 2025-06-04 14:44:13,476 | INFO     | did not find any defunct processes belonging to 2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:13,489 | INFO     | did not find any defunct processes belonging to 2060040
[2025-06-04 10:44:24] 2025-06-04 14:44:13,489 | INFO     | ready for new job
[2025-06-04 10:44:24] 2025-06-04 14:44:13,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:44:24] 2025-06-04 14:44:13,491 | INFO     | **************************************
[2025-06-04 10:44:24] 2025-06-04 14:44:13,491 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:44:24] 2025-06-04 14:44:13,491 | INFO     | **************************************
[2025-06-04 10:44:24] 2025-06-04 14:44:13,491 | INFO     | 
[2025-06-04 10:44:24] 2025-06-04 14:44:13,506 | INFO     | architecture information:
[2025-06-04 10:44:24] 2025-06-04 14:44:13,507 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:44:24] 2025-06-04 14:44:13,525 | INFO     | cat /etc/os-release:
[2025-06-04 10:44:24] NAME="CentOS Linux"
[2025-06-04 10:44:24] VERSION="7 (Core)"
[2025-06-04 10:44:24] ID="centos"
[2025-06-04 10:44:24] ID_LIKE="rhel fedora"
[2025-06-04 10:44:24] VERSION_ID="7"
[2025-06-04 10:44:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:44:24] ANSI_COLOR="0;31"
[2025-06-04 10:44:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:44:24] HOME_URL="https://www.centos.org/"
[2025-06-04 10:44:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:44:24] 
[2025-06-04 10:44:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:44:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:44:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:44:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:44:24] 
[2025-06-04 10:44:24] 2025-06-04 14:44:13,526 | INFO     | **************************************
[2025-06-04 10:44:24] 2025-06-04 14:44:14,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:44:24] 2025-06-04 14:44:14,049 | INFO     | sufficient remaining disk space (86002106368 B)
[2025-06-04 10:44:24] 2025-06-04 14:44:14,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:44:24] 2025-06-04 14:44:14,049 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:44:24] 2025-06-04 14:44:14,049 | INFO     | update_server=False
[2025-06-04 10:44:24] 2025-06-04 14:44:14,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:44:24] 2025-06-04 14:44:14,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:44:24] 2025-06-04 14:44:14,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:44:24] 2025-06-04 14:44:14,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:44:24] 2025-06-04 14:44:14,052 | INFO     | aborting loop
[2025-06-04 10:44:24] 2025-06-04 14:44:14,244 | INFO     | all data control threads have been joined
[2025-06-04 10:44:24] 2025-06-04 14:44:14,748 | INFO     | all job control threads have been joined
[2025-06-04 10:44:24] 2025-06-04 14:44:14,854 | INFO     | all payload control threads have been joined
[2025-06-04 10:44:24] 2025-06-04 14:44:14,882 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:44:24] 2025-06-04 14:44:14,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:44:24] 2025-06-04 14:44:14,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:44:24] 2025-06-04 14:44:15,056 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,057 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,106 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,193 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,201 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,248 | INFO     | [data] control thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,634 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,753 | INFO     | [job] control thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,859 | INFO     | [payload] control thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:15,919 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:16,057 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:16,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:16,463 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:16,551 | INFO     | [job] validate thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:16,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:44:24] 2025-06-04 14:44:17,699 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:18,058 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:44:24] 2025-06-04 14:44:19,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702309001024)>', '<ExcThread(monitor, started 139701956617984)>']
[2025-06-04 10:44:24] 2025-06-04 14:44:19,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:44:24] 2025-06-04 14:44:19,903 | INFO     | [monitor] control thread has ended
[2025-06-04 10:44:24] 2025-06-04 14:44:24,591 | INFO     | all workflow threads have been joined
[2025-06-04 10:44:24] 2025-06-04 14:44:24,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:44:24] 2025-06-04 14:44:24,592 | INFO     | traces error code: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:24,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:44:24] 2025-06-04 14:44:24,745 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:44:24] 2025-06-04 14:44:24,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:44:24] 2025-06-04 14:44:24,752 [wrapper] pilotpid: 2049816
[2025-06-04 10:44:24] 2025-06-04 14:44:24,755 [wrapper] Pilot exit status: 0
[2025-06-04 10:44:24] 2025-06-04 14:44:24,766 [wrapper] pandaids: 6678286530
[2025-06-04 10:44:24] 2025-06-04 14:44:24,846 [wrapper] cleanup supervisor_pilot 2225009 2049817
[2025-06-04 10:44:24] 2025-06-04 14:44:24,850 [wrapper] Test setup, not cleaning
[2025-06-04 10:44:24] 2025-06-04 14:44:24,853 [wrapper] apfmon messages muted
[2025-06-04 10:44:24] 2025-06-04 14:44:24,855 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:44:24] 2025-06-04 14:44:24,858 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:44:24]  *** Error codes and diagnostics ***
[2025-06-04 10:44:24]     "exeErrorCode": 0,
[2025-06-04 10:44:24]     "exeErrorDiag": "",
[2025-06-04 10:44:24]     "pilotErrorCode": 0,
[2025-06-04 10:44:24]     "pilotErrorDiag": "",
[2025-06-04 10:44:24]  *** Listing of results directory ***
[2025-06-04 10:44:24] total 389128
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 10:44:24] -rwx------. 1 boincer umatlas     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:44:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:43 run_atlas
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:43 job.xml
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas 215195836 Jun  4 09:43 EVNT.45006593._002061.pool.root.1
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:43 start_atlas.sh
[2025-06-04 10:44:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:43 shared
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:43 input.tar.gz
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:43 boinc_lockfile
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:43 pandaJob.out
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas    986819 Jun  4 09:43 agis_schedconf.cvmfs.json
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:44:24] drwx------. 4 boincer umatlas      4096 Jun  4 09:43 pilot3
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 10:37 init_data.xml
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas 178104094 Jun  4 10:43 HITS.45006595._051443.pool.root.1
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:43 boinc_task_state.xml
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas      1022 Jun  4 10:43 memory_monitor_summary.json
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas        95 Jun  4 10:44 pilot_heartbeat.json
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas    296100 Jun  4 10:44 log.45006595._051443.job.log.tgz.1
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas      7679 Jun  4 10:44 heartbeat.json
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:44 wrapper_checkpoint.txt
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas      4353 Jun  4 10:44 pilotlog.txt
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:44 boinc_mmap_file
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas    368210 Jun  4 10:44 log.45006595._051443.job.log.1
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas       357 Jun  4 10:44 output.list
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:44 runtime_log
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas    686080 Jun  4 10:44 result.tar.gz
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 10:44 runtime_log.err
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas       651 Jun  4 10:44 1OPNDmZktg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxbaKDm5x8rRm.diag
[2025-06-04 10:44:24] -rw-r--r--. 1 boincer umatlas     21762 Jun  4 10:44 stderr.txt
[2025-06-04 10:44:24] HITS file was successfully produced:
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas 178104094 Jun  4 10:43 shared/HITS.pool.root.1
[2025-06-04 10:44:24]  *** Contents of shared directory: ***
[2025-06-04 10:44:24] total 385284
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas 215195836 Jun  4 09:43 ATLAS.root_0
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:43 start_atlas.sh
[2025-06-04 10:44:24] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 09:43 input.tar.gz
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas 178104094 Jun  4 10:43 HITS.pool.root.1
[2025-06-04 10:44:24] -rw-------. 1 boincer umatlas    686080 Jun  4 10:44 result.tar.gz
10:44:26 (2046220): run_atlas exited; CPU time 24053.729415
10:44:26 (2046220): called boinc_finish(0)

</stderr_txt>
]]>

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