Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:23 (2836304): wrapper (7.7.26015): starting
09:46:23 (2836304): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:46:23] Arguments: --nthreads 8
[2025-06-04 09:46:23] Threads: 8
[2025-06-04 09:46:23] Checking for CVMFS
[2025-06-04 09:46:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:46:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:46:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:46:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:46:23] 2.12.6.0 2312179 23338 365968 146781 2 76 19689996 32935936 11327 16776704 1 119607166 99.715 84177830 20214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:46:23] CVMFS is ok
[2025-06-04 09:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:46:23] Further information can be found at the LHC@home message board.
[2025-06-04 09:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:46:23] Checking for apptainer binary...
[2025-06-04 09:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:46:23] Running /usr/bin/apptainer --version
[2025-06-04 09:46:23] apptainer version 1.4.1-1.el9
[2025-06-04 09:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:46:23] c6-2-11-1.aglt2.org
[2025-06-04 09:46:23] apptainer works
[2025-06-04 09:46:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:46:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:46:23] Starting ATLAS job with PandaID=6678155208
[2025-06-04 09:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:41:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:41:29]  guid=18e95d0b-5dd8-4508-acac-cbbbefff8916
[2025-06-04 10:41:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:41:29]  is_altstaged=None
[2025-06-04 10:41:29]  is_tar=False
[2025-06-04 10:41:29]  lfn=log.45006595._047876.job.log.tgz.1
[2025-06-04 10:41:29]  mtime=0
[2025-06-04 10:41:29]  protocol_id=None
[2025-06-04 10:41:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:41:29]  replicas=None
[2025-06-04 10:41:29]  scope=mc23_13p6TeV
[2025-06-04 10:41:29]  status=None
[2025-06-04 10:41:29]  status_code=0
[2025-06-04 10:41:29]  storage_token=
[2025-06-04 10:41:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678155208/log.45006595._047876.job.log.tgz.1
[2025-06-04 10:41:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/d1/log.45006595._047876.job.log.tgz.1
[2025-06-04 10:41:29]  workdir=None
[2025-06-04 10:41:29] ]
[2025-06-04 10:41:29] 2025-06-04 14:41:08,472 | INFO     | transferring file log.45006595._047876.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678155208/log.45006595._047876.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:41:29] 2025-06-04 14:41:08,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678155208/log.45006595._047876.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047876.job
[2025-06-04 10:41:29] 2025-06-04 14:41:08,490 | INFO     | adding to output.list: log.45006595._047876.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/d1/log.45006595._047876.job.log.tg
[2025-06-04 10:41:29] 2025-06-04 14:41:08,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:41:29] 2025-06-04 14:41:08,491 | INFO     | summary of transferred files:
[2025-06-04 10:41:29] 2025-06-04 14:41:08,491 | INFO     |  -- lfn=log.45006595._047876.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:41:29] 2025-06-04 14:41:08,491 | INFO     | stage-out finished correctly
[2025-06-04 10:41:29] 2025-06-04 14:41:08,586 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:41:29] 2025-06-04 14:41:10,692 | INFO     | monitor loop #246: job 0:6678155208 is in state 'finished'
[2025-06-04 10:41:29] 2025-06-04 14:41:10,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:41:29] 2025-06-04 14:41:11,477 | INFO     | job 6678155208 has state=finished
[2025-06-04 10:41:29] 2025-06-04 14:41:11,477 | INFO     | preparing for final server update for job 6678155208 in state='finished'
[2025-06-04 10:41:29] 2025-06-04 14:41:11,478 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:41:29] 2025-06-04 14:41:11,478 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:41:29] 2025-06-04 14:41:11,479 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:41:29] 2025-06-04 14:41:11,479 | INFO     | job 6678155208 has finished - writing final server update
[2025-06-04 10:41:29] 2025-06-04 14:41:11,479 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:41:29] 2025-06-04 14:41:11,482 | INFO     | PID=2840170 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 10:41:29] 2025-06-04 14:41:11,483 | INFO     | .. there are 15 such processes running
[2025-06-04 10:41:29] 2025-06-04 14:41:11,486 | INFO     | executing command: lscpu
[2025-06-04 10:41:29] 2025-06-04 14:41:11,568 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:41:29] 2025-06-04 14:41:13,195 | INFO     | monitor loop #247: job 0:6678155208 is in state 'finished'
[2025-06-04 10:41:29] 2025-06-04 14:41:13,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,015 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:41:29] 2025-06-04 14:41:14,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678155208/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,017 | INFO     | extracted standard info from prmon json
[2025-06-04 10:41:29] 2025-06-04 14:41:14,017 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:41:29] 2025-06-04 14:41:14,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:41:29] 2025-06-04 14:41:14,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:41:29] 2025-06-04 14:41:14,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:41:29] 2025-06-04 14:41:14,019 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:41:29] 2025-06-04 14:41:14,019 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,019 | INFO     | sum of deviations: 4005391638.0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,019 | INFO     | mean x: 1749046525.0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | mean y: 2288900.340425532
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | -- intersect: -217704011568.83078
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | intersect: -217704011568.83078
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | chi2: 0.7385530557316287
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | -- intersect: -217704011568.83078
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | current memory leak: 124.47 B/s (using 47 data points, chi2=0.74)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,020 | INFO     | ..............................
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . Timing measurements:
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . get job = 0 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . initial setup = 2 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . payload setup = 5 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . stage-in = 0 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . payload execution = 3250 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . stage-out = 0 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | . log creation = 0 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,021 | INFO     | ..............................
[2025-06-04 10:41:29] 2025-06-04 14:41:14,217 | INFO     | 
[2025-06-04 10:41:29] 2025-06-04 14:41:14,217 | INFO     | job summary report
[2025-06-04 10:41:29] 2025-06-04 14:41:14,217 | INFO     | --------------------------------------------------
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | PanDA job id: 6678155208
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | task id: 45006595
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | errors: (none)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | pilot state: finished 
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | transexitcode: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | exeerrorcode: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | exeerrordiag: 
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | exitcode: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | exitmsg: OK
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | cpuconsumptiontime: 21005 s
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | nevents: 400
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | neventsw: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | pid: 2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:14,218 | INFO     | pgrp: 2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | corecount: 8
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | event service: False
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | sizes: {0: 2397171, 1: 2397370, 4: 2397576, 11: 2397604, 3259: 2423049, 3260: 2423048, 3261: 2432229, 3266: 2432343}
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | --------------------------------------------------
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | 
[2025-06-04 10:41:29] 2025-06-04 14:41:14,219 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:41:29] 2025-06-04 14:41:14,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:41:29] 2025-06-04 14:41:14,236 | INFO     | job 6678155208 has completed (purged errors)
[2025-06-04 10:41:29] 2025-06-04 14:41:14,236 | INFO     | overall cleanup function is called
[2025-06-04 10:41:29] 2025-06-04 14:41:15,243 | INFO     | --- collectZombieJob: --- 10, [2846691]
[2025-06-04 10:41:29] 2025-06-04 14:41:15,243 | INFO     | zombie collector waiting for pid 2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:15,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:41:29] 2025-06-04 14:41:15,243 | INFO     | collected zombie processes
[2025-06-04 10:41:29] 2025-06-04 14:41:15,243 | INFO     | will attempt to kill all subprocesses of pid=2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:15,536 | INFO     | process IDs to be killed: [2846691] (in reverse order)
[2025-06-04 10:41:29] 2025-06-04 14:41:15,642 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:41:29] 2025-06-04 14:41:15,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:41:29] 2025-06-04 14:41:15,655 | INFO     | did not find any defunct processes belonging to 2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:15,667 | INFO     | did not find any defunct processes belonging to 2846691
[2025-06-04 10:41:29] 2025-06-04 14:41:15,668 | INFO     | ready for new job
[2025-06-04 10:41:29] 2025-06-04 14:41:15,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:41:29] 2025-06-04 14:41:15,669 | INFO     | **************************************
[2025-06-04 10:41:29] 2025-06-04 14:41:15,669 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:41:29] 2025-06-04 14:41:15,669 | INFO     | **************************************
[2025-06-04 10:41:29] 2025-06-04 14:41:15,670 | INFO     | 
[2025-06-04 10:41:29] 2025-06-04 14:41:15,688 | INFO     | architecture information:
[2025-06-04 10:41:29] 2025-06-04 14:41:15,688 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:41:29] 2025-06-04 14:41:15,704 | INFO     | cat /etc/os-release:
[2025-06-04 10:41:29] NAME="CentOS Linux"
[2025-06-04 10:41:29] VERSION="7 (Core)"
[2025-06-04 10:41:29] ID="centos"
[2025-06-04 10:41:29] ID_LIKE="rhel fedora"
[2025-06-04 10:41:29] VERSION_ID="7"
[2025-06-04 10:41:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:41:29] ANSI_COLOR="0;31"
[2025-06-04 10:41:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:41:29] HOME_URL="https://www.centos.org/"
[2025-06-04 10:41:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:41:29] 
[2025-06-04 10:41:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:41:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:41:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:41:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:41:29] 
[2025-06-04 10:41:29] 2025-06-04 14:41:15,704 | INFO     | **************************************
[2025-06-04 10:41:29] 2025-06-04 14:41:16,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:41:29] 2025-06-04 14:41:16,224 | INFO     | sufficient remaining disk space (95588188160 B)
[2025-06-04 10:41:29] 2025-06-04 14:41:16,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:41:29] 2025-06-04 14:41:16,224 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:41:29] 2025-06-04 14:41:16,224 | INFO     | update_server=False
[2025-06-04 10:41:29] 2025-06-04 14:41:16,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:41:29] 2025-06-04 14:41:16,225 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:41:29] 2025-06-04 14:41:16,225 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:41:29] 2025-06-04 14:41:16,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:41:29] 2025-06-04 14:41:16,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:41:29] 2025-06-04 14:41:16,513 | INFO     | all data control threads have been joined
[2025-06-04 10:41:29] 2025-06-04 14:41:16,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:41:29] 2025-06-04 14:41:16,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:41:29] 2025-06-04 14:41:16,703 | INFO     | aborting loop
[2025-06-04 10:41:29] 2025-06-04 14:41:17,230 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,258 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,448 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,491 | INFO     | all payload control threads have been joined
[2025-06-04 10:41:29] 2025-06-04 14:41:17,518 | INFO     | [data] control thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,704 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,709 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:17,800 | INFO     | all job control threads have been joined
[2025-06-04 10:41:29] 2025-06-04 14:41:17,889 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,100 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,270 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,461 | INFO     | [job] validate thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,496 | INFO     | [payload] control thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,607 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,682 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:18,805 | INFO     | [job] control thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:19,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:41:29] 2025-06-04 14:41:19,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:41:29] 2025-06-04 14:41:20,135 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:23,192 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:41:29] 2025-06-04 14:41:24,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399673476928)>', '<ExcThread(monitor, started 140399058351872)>']
[2025-06-04 10:41:29] 2025-06-04 14:41:25,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:41:29] 2025-06-04 14:41:25,260 | INFO     | [monitor] control thread has ended
[2025-06-04 10:41:29] 2025-06-04 14:41:29,513 | INFO     | all workflow threads have been joined
[2025-06-04 10:41:29] 2025-06-04 14:41:29,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:41:29] 2025-06-04 14:41:29,514 | INFO     | traces error code: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:29,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:41:29] 2025-06-04 14:41:29,670 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:41:29] 2025-06-04 14:41:29,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:41:29] 2025-06-04 14:41:29,674 [wrapper] pilotpid: 2840170
[2025-06-04 10:41:29] 2025-06-04 14:41:29,676 [wrapper] Pilot exit status: 0
[2025-06-04 10:41:29] 2025-06-04 14:41:29,683 [wrapper] pandaids: 6678155208
[2025-06-04 10:41:29] 2025-06-04 14:41:29,746 [wrapper] cleanup supervisor_pilot 3025922 2840171
[2025-06-04 10:41:29] 2025-06-04 14:41:29,749 [wrapper] Test setup, not cleaning
[2025-06-04 10:41:29] 2025-06-04 14:41:29,750 [wrapper] apfmon messages muted
[2025-06-04 10:41:29] 2025-06-04 14:41:29,752 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:41:29] 2025-06-04 14:41:29,754 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:41:29]  *** Error codes and diagnostics ***
[2025-06-04 10:41:29]     "exeErrorCode": 0,
[2025-06-04 10:41:29]     "exeErrorDiag": "",
[2025-06-04 10:41:29]     "pilotErrorCode": 0,
[2025-06-04 10:41:29]     "pilotErrorDiag": "",
[2025-06-04 10:41:29]  *** Listing of results directory ***
[2025-06-04 10:41:29] total 388060
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 10:41:29] -rwx------. 1 boincer umatlas     37140 Jun  3 19:19 runpilot2-wrapper.sh
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:19 queuedata.json
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:41:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:46 run_atlas
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:46 job.xml
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas 217423943 Jun  4 09:46 EVNT.45006593._001922.pool.root.1
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 10:41:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:46 shared
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:46 input.tar.gz
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:46 boinc_lockfile
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:46 pandaJob.out
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas    986819 Jun  4 09:46 agis_schedconf.cvmfs.json
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:41:29] drwx------. 4 boincer umatlas      4096 Jun  4 09:46 pilot3
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 10:39 init_data.xml
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas        95 Jun  4 10:40 pilot_heartbeat.json
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas 174848460 Jun  4 10:40 HITS.45006595._047876.pool.root.1
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:40 boinc_task_state.xml
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas      1038 Jun  4 10:41 memory_monitor_summary.json
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:41 wrapper_checkpoint.txt
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:41 boinc_mmap_file
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas    298158 Jun  4 10:41 log.45006595._047876.job.log.tgz.1
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas      7720 Jun  4 10:41 heartbeat.json
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas      4476 Jun  4 10:41 pilotlog.txt
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas    338102 Jun  4 10:41 log.45006595._047876.job.log.1
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas       357 Jun  4 10:41 output.list
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:41 runtime_log
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas    655360 Jun  4 10:41 result.tar.gz
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 10:41 runtime_log.err
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas       651 Jun  4 10:41 0RyKDmZ5pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTEaKDmO1ukbm.diag
[2025-06-04 10:41:29] -rw-r--r--. 1 boincer umatlas     21411 Jun  4 10:41 stderr.txt
[2025-06-04 10:41:29] HITS file was successfully produced:
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas 174848460 Jun  4 10:40 shared/HITS.pool.root.1
[2025-06-04 10:41:29]  *** Contents of shared directory: ***
[2025-06-04 10:41:29] total 384244
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas 217423943 Jun  4 09:46 ATLAS.root_0
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:46 start_atlas.sh
[2025-06-04 10:41:29] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:46 input.tar.gz
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas 174848460 Jun  4 10:40 HITS.pool.root.1
[2025-06-04 10:41:29] -rw-------. 1 boincer umatlas    655360 Jun  4 10:41 result.tar.gz
10:41:31 (2836304): run_atlas exited; CPU time 21115.136759
10:41:31 (2836304): called boinc_finish(0)

</stderr_txt>
]]>

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