Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:14:59 (4126248): wrapper (7.7.26015): starting
10:14:59 (4126248): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:14:59] Arguments: --nthreads 8
[2025-06-04 10:14:59] Threads: 8
[2025-06-04 10:14:59] Checking for CVMFS
[2025-06-04 10:14:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:14:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:14:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:15:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:15:00] 2.12.6.0 34999 38754 533056 146781 3 625 22173931 32935936 14700 16776704 1 300423674 99.616 298577498 22536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:15:00] CVMFS is ok
[2025-06-04 10:15:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:15:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:15:00] Further information can be found at the LHC@home message board.
[2025-06-04 10:15:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:15:00] Checking for apptainer binary...
[2025-06-04 10:15:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:15:00] Running /usr/bin/apptainer --version
[2025-06-04 10:15:00] apptainer version 1.4.1-1.el9
[2025-06-04 10:15:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:15:00] c7-2-16.aglt2.org
[2025-06-04 10:15:00] apptainer works
[2025-06-04 10:15:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:15:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:15:00] Starting ATLAS job with PandaID=6678391646
[2025-06-04 10:15:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:06:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:06:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:06:44]  is_altstaged=None
[2025-06-04 11:06:44]  is_tar=False
[2025-06-04 11:06:44]  lfn=log.45006595._055008.job.log.tgz.1
[2025-06-04 11:06:44]  mtime=0
[2025-06-04 11:06:44]  protocol_id=None
[2025-06-04 11:06:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:06:44]  replicas=None
[2025-06-04 11:06:44]  scope=mc23_13p6TeV
[2025-06-04 11:06:44]  status=None
[2025-06-04 11:06:44]  status_code=0
[2025-06-04 11:06:44]  storage_token=
[2025-06-04 11:06:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678391646/log.45006595._055008.job.log.tgz.1
[2025-06-04 11:06:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/53/log.45006595._055008.job.log.tgz.1
[2025-06-04 11:06:44]  workdir=None
[2025-06-04 11:06:44] ]
[2025-06-04 11:06:44] 2025-06-04 15:06:20,135 | INFO     | transferring file log.45006595._055008.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678391646/log.45006595._055008.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:06:44] 2025-06-04 15:06:20,135 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678391646/log.45006595._055008.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055008.job
[2025-06-04 11:06:44] 2025-06-04 15:06:20,155 | INFO     | adding to output.list: log.45006595._055008.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/53/log.45006595._055008.job.log.tg
[2025-06-04 11:06:44] 2025-06-04 15:06:20,155 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:06:44] 2025-06-04 15:06:20,156 | INFO     | summary of transferred files:
[2025-06-04 11:06:44] 2025-06-04 15:06:20,156 | INFO     |  -- lfn=log.45006595._055008.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:06:44] 2025-06-04 15:06:20,156 | INFO     | stage-out finished correctly
[2025-06-04 11:06:44] 2025-06-04 15:06:20,415 | WARNING  | process 4141993 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:06:44] 2025-06-04 15:06:20,415 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391646/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:06:44] 2025-06-04 15:06:20,707 | INFO     | number of running child processes to parent process 4141993: 1
[2025-06-04 11:06:44] 2025-06-04 15:06:20,707 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:06:44] 2025-06-04 15:06:20,726 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:06:44] 2025-06-04 15:06:21,530 | INFO     | job 6678391646 has state=finished
[2025-06-04 11:06:44] 2025-06-04 15:06:21,530 | INFO     | preparing for final server update for job 6678391646 in state='finished'
[2025-06-04 11:06:44] 2025-06-04 15:06:21,530 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:06:44] 2025-06-04 15:06:21,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:06:44] 2025-06-04 15:06:21,530 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:06:44] 2025-06-04 15:06:21,531 | INFO     | job 6678391646 has finished - writing final server update
[2025-06-04 11:06:44] 2025-06-04 15:06:21,531 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:06:44] 2025-06-04 15:06:21,549 | INFO     | executing command: lscpu
[2025-06-04 11:06:44] 2025-06-04 15:06:21,638 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:06:44] 2025-06-04 15:06:23,209 | INFO     | monitor loop #228: job 0:6678391646 is in state 'finished'
[2025-06-04 11:06:44] 2025-06-04 15:06:23,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,034 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:06:44] 2025-06-04 15:06:25,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678391646/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,036 | INFO     | extracted standard info from prmon json
[2025-06-04 11:06:44] 2025-06-04 15:06:25,036 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:06:44] 2025-06-04 15:06:25,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:06:44] 2025-06-04 15:06:25,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:06:44] 2025-06-04 15:06:25,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:06:44] 2025-06-04 15:06:25,037 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | sum of deviations: 2495454124.0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | mean x: 1749048116.0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | mean y: 2179845.976744186
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | -- intersect: -177132053032.71808
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | intersect: -177132053032.71808
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | chi2: 0.7462285369562264
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | -- intersect: -177132053032.71808
[2025-06-04 11:06:44] 2025-06-04 15:06:25,038 | INFO     | current memory leak: 101.27 B/s (using 43 data points, chi2=0.75)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | ..............................
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . Timing measurements:
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . get job = 0 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . initial setup = 2 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . payload setup = 4 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . stage-in = 0 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . payload execution = 3049 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . stage-out = 0 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | . log creation = 0 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,039 | INFO     | ..............................
[2025-06-04 11:06:44] 2025-06-04 15:06:25,119 | INFO     | 
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | job summary report
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | --------------------------------------------------
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | PanDA job id: 6678391646
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | task id: 45006595
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | errors: (none)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | pilot state: finished 
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | transexitcode: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | exeerrorcode: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | exeerrordiag: 
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | exitcode: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | exitmsg: OK
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | cpuconsumptiontime: 19669 s
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | nevents: 400
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | neventsw: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,120 | INFO     | pid: 4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | pgrp: 4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | corecount: 8
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | event service: False
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 3057: 2422942, 3058: 2431883, 3059: 2431939, 3063: 2432237}
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | --------------------------------------------------
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | 
[2025-06-04 11:06:44] 2025-06-04 15:06:25,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:06:44] 2025-06-04 15:06:25,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:06:44] 2025-06-04 15:06:25,142 | INFO     | job 6678391646 has completed (purged errors)
[2025-06-04 11:06:44] 2025-06-04 15:06:25,142 | INFO     | overall cleanup function is called
[2025-06-04 11:06:44] 2025-06-04 15:06:26,150 | INFO     | --- collectZombieJob: --- 10, [4141993]
[2025-06-04 11:06:44] 2025-06-04 15:06:26,150 | INFO     | zombie collector waiting for pid 4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:26,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:06:44] 2025-06-04 15:06:26,150 | INFO     | collected zombie processes
[2025-06-04 11:06:44] 2025-06-04 15:06:26,150 | INFO     | will attempt to kill all subprocesses of pid=4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:26,465 | INFO     | process IDs to be killed: [4141993] (in reverse order)
[2025-06-04 11:06:44] 2025-06-04 15:06:26,593 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:06:44] 2025-06-04 15:06:26,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:06:44] 2025-06-04 15:06:26,606 | INFO     | did not find any defunct processes belonging to 4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:26,617 | INFO     | did not find any defunct processes belonging to 4141993
[2025-06-04 11:06:44] 2025-06-04 15:06:26,618 | INFO     | ready for new job
[2025-06-04 11:06:44] 2025-06-04 15:06:26,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:06:44] 2025-06-04 15:06:26,619 | INFO     | **************************************
[2025-06-04 11:06:44] 2025-06-04 15:06:26,619 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:06:44] 2025-06-04 15:06:26,619 | INFO     | **************************************
[2025-06-04 11:06:44] 2025-06-04 15:06:26,619 | INFO     | 
[2025-06-04 11:06:44] 2025-06-04 15:06:26,635 | INFO     | architecture information:
[2025-06-04 11:06:44] 2025-06-04 15:06:26,635 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:06:44] 2025-06-04 15:06:26,647 | INFO     | cat /etc/os-release:
[2025-06-04 11:06:44] NAME="CentOS Linux"
[2025-06-04 11:06:44] VERSION="7 (Core)"
[2025-06-04 11:06:44] ID="centos"
[2025-06-04 11:06:44] ID_LIKE="rhel fedora"
[2025-06-04 11:06:44] VERSION_ID="7"
[2025-06-04 11:06:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:06:44] ANSI_COLOR="0;31"
[2025-06-04 11:06:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:06:44] HOME_URL="https://www.centos.org/"
[2025-06-04 11:06:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:06:44] 
[2025-06-04 11:06:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:06:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:06:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:06:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:06:44] 
[2025-06-04 11:06:44] 2025-06-04 15:06:26,648 | INFO     | **************************************
[2025-06-04 11:06:44] 2025-06-04 15:06:27,151 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:06:44] 2025-06-04 15:06:27,169 | INFO     | sufficient remaining disk space (75732353024 B)
[2025-06-04 11:06:44] 2025-06-04 15:06:27,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:06:44] 2025-06-04 15:06:27,169 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:06:44] 2025-06-04 15:06:27,169 | INFO     | update_server=False
[2025-06-04 11:06:44] 2025-06-04 15:06:27,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:06:44] 2025-06-04 15:06:27,170 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:06:44] 2025-06-04 15:06:27,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:44] 2025-06-04 15:06:27,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:06:44] 2025-06-04 15:06:27,170 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:06:44] 2025-06-04 15:06:27,171 | INFO     | aborting loop
[2025-06-04 11:06:44] 2025-06-04 15:06:27,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:06:44] 2025-06-04 15:06:27,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:06:44] 2025-06-04 15:06:27,525 | INFO     | all data control threads have been joined
[2025-06-04 11:06:44] 2025-06-04 15:06:28,174 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:28,176 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:28,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:06:44] 2025-06-04 15:06:28,238 | INFO     | all payload control threads have been joined
[2025-06-04 11:06:44] 2025-06-04 15:06:28,346 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:28,531 | INFO     | [data] control thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:28,534 | INFO     | all job control threads have been joined
[2025-06-04 11:06:44] 2025-06-04 15:06:29,016 | INFO     | [job] validate thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,114 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,114 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,150 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,213 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,242 | INFO     | [payload] control thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,297 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:29,539 | INFO     | [job] control thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:30,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:06:44] 2025-06-04 15:06:30,211 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:31,135 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:31,177 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:37,528 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:06:44] 2025-06-04 15:06:38,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:06:44] 2025-06-04 15:06:38,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644743890752)>', '<ExcThread(monitor, started 139644242994944)>']
[2025-06-04 11:06:44] 2025-06-04 15:06:39,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:06:44] 2025-06-04 15:06:39,229 | INFO     | [monitor] control thread has ended
[2025-06-04 11:06:44] 2025-06-04 15:06:43,799 | INFO     | all workflow threads have been joined
[2025-06-04 11:06:44] 2025-06-04 15:06:43,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:06:44] 2025-06-04 15:06:43,799 | INFO     | traces error code: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:43,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:06:44] 2025-06-04 15:06:43,940 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:06:44] 2025-06-04 15:06:43,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:06:44] 2025-06-04 15:06:43,945 [wrapper] pilotpid: 4130154
[2025-06-04 11:06:44] 2025-06-04 15:06:43,946 [wrapper] Pilot exit status: 0
[2025-06-04 11:06:44] 2025-06-04 15:06:43,954 [wrapper] pandaids: 6678391646
[2025-06-04 11:06:44] 2025-06-04 15:06:44,047 [wrapper] cleanup supervisor_pilot  197220 4130156
[2025-06-04 11:06:44] 2025-06-04 15:06:44,049 [wrapper] Test setup, not cleaning
[2025-06-04 11:06:44] 2025-06-04 15:06:44,051 [wrapper] apfmon messages muted
[2025-06-04 11:06:44] 2025-06-04 15:06:44,053 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:06:44] 2025-06-04 15:06:44,054 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:06:44]  *** Error codes and diagnostics ***
[2025-06-04 11:06:44]     "exeErrorCode": 0,
[2025-06-04 11:06:44]     "exeErrorDiag": "",
[2025-06-04 11:06:44]     "pilotErrorCode": 0,
[2025-06-04 11:06:44]     "pilotErrorDiag": "",
[2025-06-04 11:06:44]  *** Listing of results directory ***
[2025-06-04 11:06:44] total 392944
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 11:06:44] -rwx------. 1 boincer umatlas     37140 Jun  4 03:37 runpilot2-wrapper.sh
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:37 queuedata.json
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:06:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:14 run_atlas
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:14 job.xml
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas 219182111 Jun  4 10:14 EVNT.45006593._002201.pool.root.1
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:14 start_atlas.sh
[2025-06-04 11:06:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:14 shared
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 10:14 input.tar.gz
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:14 boinc_lockfile
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 10:15 pandaJob.out
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas    986819 Jun  4 10:15 agis_schedconf.cvmfs.json
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:06:44] drwx------. 4 boincer umatlas      4096 Jun  4 10:15 pilot3
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 11:02 init_data.xml
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas 178143974 Jun  4 11:05 HITS.45006595._055008.pool.root.1
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:05 boinc_task_state.xml
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas      1028 Jun  4 11:06 memory_monitor_summary.json
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas        95 Jun  4 11:06 pilot_heartbeat.json
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas    282935 Jun  4 11:06 log.45006595._055008.job.log.tgz.1
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas      7683 Jun  4 11:06 heartbeat.json
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:06 boinc_mmap_file
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:06 wrapper_checkpoint.txt
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas      4548 Jun  4 11:06 pilotlog.txt
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas    322499 Jun  4 11:06 log.45006595._055008.job.log.1
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas       357 Jun  4 11:06 output.list
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:06 runtime_log
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas    624640 Jun  4 11:06 result.tar.gz
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 11:06 runtime_log.err
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas       649 Jun  4 11:06 PAPNDmQrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBfnKDmfdjjXo.diag
[2025-06-04 11:06:44] -rw-r--r--. 1 boincer umatlas     21368 Jun  4 11:06 stderr.txt
[2025-06-04 11:06:44] HITS file was successfully produced:
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas 178143974 Jun  4 11:05 shared/HITS.pool.root.1
[2025-06-04 11:06:44]  *** Contents of shared directory: ***
[2025-06-04 11:06:44] total 389156
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas 219182111 Jun  4 10:14 ATLAS.root_0
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:14 start_atlas.sh
[2025-06-04 11:06:44] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 10:14 input.tar.gz
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas 178143974 Jun  4 11:05 HITS.pool.root.1
[2025-06-04 11:06:44] -rw-------. 1 boincer umatlas    624640 Jun  4 11:06 result.tar.gz
11:06:45 (4126248): run_atlas exited; CPU time 19753.611033
11:06:45 (4126248): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN