Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:55:32 (3929): wrapper (7.7.26015): starting
23:55:32 (3929): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:55:32] Arguments: --nthreads 8
[2025-06-04 23:55:32] Threads: 8
[2025-06-04 23:55:32] Checking for CVMFS
[2025-06-04 23:55:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:55:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:55:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:55:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:55:34] 2.11.2.0 408 33775 98396 146795 1 60 13111828 25165825 3136 130560 0 17149288 99.795 19452801 2056 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 23:55:34] CVMFS is ok
[2025-06-04 23:55:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:55:34] Checking for apptainer binary...
[2025-06-04 23:55:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:55:34] Running /usr/bin/apptainer --version
[2025-06-04 23:55:34] apptainer version 1.3.2-1.el7
[2025-06-04 23:55:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:55:51] cg-vwn429.simple-grid.lan
[2025-06-04 23:55:51] apptainer works
[2025-06-04 23:55:51] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:55:51] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:55:51] Starting ATLAS job with PandaID=6678392075
[2025-06-04 23:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:54:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:54:41] 2025-06-05 01:54:28,848 | INFO     | extracted standard info from prmon json
[2025-06-05 03:54:41] 2025-06-05 01:54:28,848 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:54:41] 2025-06-05 01:54:28,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:54:41] 2025-06-05 01:54:28,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:54:41] 2025-06-05 01:54:28,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:54:41] 2025-06-05 01:54:28,854 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:54:41] 2025-06-05 01:54:28,855 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,857 | INFO     | sum of deviations: 86897012163.00002
[2025-06-05 03:54:41] 2025-06-05 01:54:28,858 | INFO     | mean x: 1749081626.5
[2025-06-05 03:54:41] 2025-06-05 01:54:28,858 | INFO     | mean y: 2435004.964285714
[2025-06-05 03:54:41] 2025-06-05 01:54:28,858 | INFO     | -- intersect: -43609072424.73215
[2025-06-05 03:54:41] 2025-06-05 01:54:28,858 | INFO     | intersect: -43609072424.73215
[2025-06-05 03:54:41] 2025-06-05 01:54:28,859 | INFO     | chi2: 7.961882675810274
[2025-06-05 03:54:41] 2025-06-05 01:54:28,859 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,861 | INFO     | sum of deviations: 99962049014.99997
[2025-06-05 03:54:41] 2025-06-05 01:54:28,861 | INFO     | mean x: 1749081474.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,861 | INFO     | mean y: 2443556.2511415523
[2025-06-05 03:54:41] 2025-06-05 01:54:28,862 | INFO     | -- intersect: -53681384448.121025
[2025-06-05 03:54:41] 2025-06-05 01:54:28,862 | INFO     | intersect: -53681384448.121025
[2025-06-05 03:54:41] 2025-06-05 01:54:28,862 | INFO     | chi2: 7.260485403722149
[2025-06-05 03:54:41] 2025-06-05 01:54:28,862 | INFO     | current chi2=7.260485403722149 (change=8.809439935847132 %)
[2025-06-05 03:54:41] 2025-06-05 01:54:28,863 | INFO     | right removable region: 218
[2025-06-05 03:54:41] 2025-06-05 01:54:28,864 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,865 | INFO     | sum of deviations: 9155254417.999998
[2025-06-05 03:54:41] 2025-06-05 01:54:28,866 | INFO     | mean x: 1749081779.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,866 | INFO     | mean y: 2486914.8812785386
[2025-06-05 03:54:41] 2025-06-05 01:54:28,866 | INFO     | -- intersect: -4914270935.319876
[2025-06-05 03:54:41] 2025-06-05 01:54:28,866 | INFO     | intersect: -4914270935.319876
[2025-06-05 03:54:41] 2025-06-05 01:54:28,866 | INFO     | chi2: 2.962016011458798
[2025-06-05 03:54:41] 2025-06-05 01:54:28,867 | INFO     | current chi2=2.962016011458798 (change=62.797542590548716 %)
[2025-06-05 03:54:41] 2025-06-05 01:54:28,867 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 03:54:41] 2025-06-05 01:54:28,869 | INFO     | sum of deviations: -39728717145.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,870 | INFO     | mean x: 1749081931.5
[2025-06-05 03:54:41] 2025-06-05 01:54:28,870 | INFO     | mean y: 2520976.261682243
[2025-06-05 03:54:41] 2025-06-05 01:54:28,870 | INFO     | -- intersect: 22869270492.443466
[2025-06-05 03:54:41] 2025-06-05 01:54:28,870 | INFO     | intersect: 22869270492.443466
[2025-06-05 03:54:41] 2025-06-05 01:54:28,871 | INFO     | chi2: 0.9407606045148307
[2025-06-05 03:54:41] 2025-06-05 01:54:28,871 | INFO     | current chi2=0.9407606045148307 (change=68.23917896205077 %)
[2025-06-05 03:54:41] 2025-06-05 01:54:28,871 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,873 | INFO     | sum of deviations: -46978556714.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,873 | INFO     | mean x: 1749082084.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,873 | INFO     | mean y: 2526247.4210526315
[2025-06-05 03:54:41] 2025-06-05 01:54:28,873 | INFO     | -- intersect: 29029550892.755245
[2025-06-05 03:54:41] 2025-06-05 01:54:28,873 | INFO     | intersect: 29029550892.755245
[2025-06-05 03:54:41] 2025-06-05 01:54:28,874 | INFO     | chi2: 0.857488819282931
[2025-06-05 03:54:41] 2025-06-05 01:54:28,874 | INFO     | current chi2=0.857488819282931 (change=8.851538301271093 %)
[2025-06-05 03:54:41] 2025-06-05 01:54:28,874 | INFO     | left removable region: 30
[2025-06-05 03:54:41] 2025-06-05 01:54:28,875 | INFO     | sum of square deviations: 2060343747.0
[2025-06-05 03:54:41] 2025-06-05 01:54:28,876 | INFO     | sum of deviations: -24861638331.5
[2025-06-05 03:54:41] 2025-06-05 01:54:28,876 | INFO     | mean x: 1749082358.5
[2025-06-05 03:54:41] 2025-06-05 01:54:28,876 | INFO     | mean y: 2531943.8563829786
[2025-06-05 03:54:41] 2025-06-05 01:54:28,877 | INFO     | -- intersect: 21108259117.951096
[2025-06-05 03:54:41] 2025-06-05 01:54:28,877 | INFO     | intersect: 21108259117.951096
[2025-06-05 03:54:41] 2025-06-05 01:54:28,877 | INFO     | chi2: 0.06214310582804682
[2025-06-05 03:54:41] 2025-06-05 01:54:28,877 | INFO     | -- intersect: 21108259117.951096
[2025-06-05 03:54:41] 2025-06-05 01:54:28,877 | INFO     | current memory leak: -12.07 B/s (using 188 data points, chi2=0.06)
[2025-06-05 03:54:41] 2025-06-05 01:54:28,878 | INFO     | ..............................
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . Timing measurements:
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . get job = 0 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . initial setup = 8 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . payload setup = 140 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . stage-in = 0 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . payload execution = 13773 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . stage-out = 1 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | . log creation = 0 s
[2025-06-05 03:54:41] 2025-06-05 01:54:28,879 | INFO     | ..............................
[2025-06-05 03:54:41] 2025-06-05 01:54:29,013 | INFO     | 
[2025-06-05 03:54:41] 2025-06-05 01:54:29,013 | INFO     | job summary report
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | --------------------------------------------------
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | PanDA job id: 6678392075
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | task id: 45006595
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | errors: (none)
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | pilot state: finished 
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | transexitcode: 0
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | exeerrorcode: 0
[2025-06-05 03:54:41] 2025-06-05 01:54:29,014 | INFO     | exeerrordiag: 
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | exitcode: 0
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | exitmsg: OK
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | cpuconsumptiontime: 50923 s
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | nevents: 400
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | neventsw: 0
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | pid: 17311
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | pgrp: 17311
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | corecount: 8
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | event service: False
[2025-06-05 03:54:41] 2025-06-05 01:54:29,015 | INFO     | sizes: {0: 2396514, 1: 2397371, 2: 2397399, 12: 2397399, 23: 2397427, 34: 2397455, 45: 2397611, 55: 2397639, 66: 2397667, 77: 2397695, 88: 2397751, 93: 2398265, 98
[2025-06-05 03:54:41] 2025-06-05 01:54:29,016 | INFO     | --------------------------------------------------
[2025-06-05 03:54:41] 2025-06-05 01:54:29,016 | INFO     | 
[2025-06-05 03:54:41] 2025-06-05 01:54:29,016 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 03:54:41] 2025-06-05 01:54:29,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,055 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:54:41] 2025-06-05 01:54:29,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:54:41] 2025-06-05 01:54:29,058 | INFO     | job 6678392075 has completed (purged errors)
[2025-06-05 03:54:41] 2025-06-05 01:54:29,058 | INFO     | overall cleanup function is called
[2025-06-05 03:54:41] 2025-06-05 01:54:30,067 | INFO     | --- collectZombieJob: --- 10, [17311]
[2025-06-05 03:54:41] 2025-06-05 01:54:30,068 | INFO     | zombie collector waiting for pid 17311
[2025-06-05 03:54:41] 2025-06-05 01:54:30,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:54:41] 2025-06-05 01:54:30,068 | INFO     | collected zombie processes
[2025-06-05 03:54:41] 2025-06-05 01:54:30,068 | INFO     | will attempt to kill all subprocesses of pid=17311
[2025-06-05 03:54:41] 2025-06-05 01:54:30,178 | INFO     | process IDs to be killed: [17311] (in reverse order)
[2025-06-05 03:54:41] 2025-06-05 01:54:30,232 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:54:41] 2025-06-05 01:54:30,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:54:41] 2025-06-05 01:54:30,236 | INFO     | did not find any defunct processes belonging to 17311
[2025-06-05 03:54:41] 2025-06-05 01:54:30,240 | INFO     | did not find any defunct processes belonging to 17311
[2025-06-05 03:54:41] 2025-06-05 01:54:30,240 | INFO     | ready for new job
[2025-06-05 03:54:41] 2025-06-05 01:54:30,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:54:42] 2025-06-05 01:54:30,243 | INFO     | **************************************
[2025-06-05 03:54:42] 2025-06-05 01:54:30,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:54:42] 2025-06-05 01:54:30,243 | INFO     | **************************************
[2025-06-05 03:54:42] 2025-06-05 01:54:30,243 | INFO     | 
[2025-06-05 03:54:42] 2025-06-05 01:54:30,244 | INFO     | pilot is running in a VM
[2025-06-05 03:54:42] 2025-06-05 01:54:30,244 | INFO     | architecture information:
[2025-06-05 03:54:42] 2025-06-05 01:54:30,247 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:54:42] 2025-06-05 01:54:30,270 | INFO     | cat /etc/os-release:
[2025-06-05 03:54:42] NAME="CentOS Linux"
[2025-06-05 03:54:42] VERSION="7 (Core)"
[2025-06-05 03:54:42] ID="centos"
[2025-06-05 03:54:42] ID_LIKE="rhel fedora"
[2025-06-05 03:54:42] VERSION_ID="7"
[2025-06-05 03:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:54:42] ANSI_COLOR="0;31"
[2025-06-05 03:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:54:42] HOME_URL="https://www.centos.org/"
[2025-06-05 03:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:54:42] 
[2025-06-05 03:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:54:42] 
[2025-06-05 03:54:42] 2025-06-05 01:54:30,270 | INFO     | **************************************
[2025-06-05 03:54:42] 2025-06-05 01:54:30,774 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 03:54:42] 2025-06-05 01:54:30,837 | INFO     | sufficient remaining disk space (497708695552 B)
[2025-06-05 03:54:42] 2025-06-05 01:54:30,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:54:42] 2025-06-05 01:54:30,838 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:54:42] 2025-06-05 01:54:30,838 | INFO     | update_server=False
[2025-06-05 03:54:42] 2025-06-05 01:54:30,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:54:42] 2025-06-05 01:54:30,843 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:54:42] 2025-06-05 01:54:30,844 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:54:42] 2025-06-05 01:54:30,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:54:42] 2025-06-05 01:54:30,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:54:42] 2025-06-05 01:54:30,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:54:42] 2025-06-05 01:54:31,071 | INFO     | all data control threads have been joined
[2025-06-05 03:54:42] 2025-06-05 01:54:31,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:54:42] 2025-06-05 01:54:31,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:54:42] 2025-06-05 01:54:31,472 | INFO     | aborting loop
[2025-06-05 03:54:42] 2025-06-05 01:54:31,488 | INFO     | all payload control threads have been joined
[2025-06-05 03:54:42] 2025-06-05 01:54:31,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:54:42] 2025-06-05 01:54:31,647 | INFO     | all job control threads have been joined
[2025-06-05 03:54:42] 2025-06-05 01:54:31,843 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:31,854 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,077 | INFO     | [data] control thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,097 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,156 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,493 | INFO     | [payload] control thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,543 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,552 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,653 | INFO     | [job] control thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,966 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:32,975 | INFO     | [job] validate thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:33,228 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:33,256 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:33,575 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:33,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:35,572 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:54:42] 2025-06-05 01:54:35,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320193451840)>', '<ExcThread(monitor, started 140319886644992)>']
[2025-06-05 03:54:42] 2025-06-05 01:54:36,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:54:42] 2025-06-05 01:54:36,879 | INFO     | [monitor] control thread has ended
[2025-06-05 03:54:42] 2025-06-05 01:54:40,971 | INFO     | all workflow threads have been joined
[2025-06-05 03:54:42] 2025-06-05 01:54:40,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:54:42] 2025-06-05 01:54:40,972 | INFO     | traces error code: 0
[2025-06-05 03:54:42] 2025-06-05 01:54:40,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:54:42] 2025-06-05 01:54:41,317 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:54:42] 2025-06-05 01:54:41,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:54:42] 2025-06-05 01:54:41,341 [wrapper] pilotpid: 10732
[2025-06-05 03:54:42] 2025-06-05 01:54:41,354 [wrapper] Pilot exit status: 0
[2025-06-05 03:54:42] 2025-06-05 01:54:41,400 [wrapper] pandaids: 6678392075
[2025-06-05 03:54:42] 2025-06-05 01:54:41,459 [wrapper] cleanup supervisor_pilot 31898 10733
[2025-06-05 03:54:42] 2025-06-05 01:54:41,466 [wrapper] Test setup, not cleaning
[2025-06-05 03:54:42] 2025-06-05 01:54:41,475 [wrapper] apfmon messages muted
[2025-06-05 03:54:42] 2025-06-05 01:54:41,485 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:54:42] 2025-06-05 01:54:41,492 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:54:42]  *** Error codes and diagnostics ***
[2025-06-05 03:54:42]     "exeErrorCode": 0,
[2025-06-05 03:54:42]     "exeErrorDiag": "",
[2025-06-05 03:54:42]     "pilotErrorCode": 0,
[2025-06-05 03:54:42]     "pilotErrorDiag": "",
[2025-06-05 03:54:42]  *** Listing of results directory ***
[2025-06-05 03:54:42] total 391200
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:38 queuedata.json
[2025-06-05 03:54:42] -rwx------. 1 boinc boinc     37140 Jun  4 09:38 runpilot2-wrapper.sh
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc       100 Jun  4 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:54:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 23:55 run_atlas
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc       105 Jun  4 23:55 job.xml
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc 216997264 Jun  4 23:55 EVNT.45006593._002205.pool.root.1
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc      6393 Jun  4 23:55 init_data.xml
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:55 start_atlas.sh
[2025-06-05 03:54:42] drwxrwx--x. 2 boinc boinc        68 Jun  4 23:55 shared
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc    508886 Jun  4 23:55 input.tar.gz
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc         0 Jun  4 23:55 boinc_lockfile
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc      2525 Jun  4 23:55 pandaJob.out
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc    987032 Jun  4 23:59 agis_schedconf.cvmfs.json
[2025-06-05 03:54:42] drwx------. 4 boinc boinc      4096 Jun  4 23:59 pilot3
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc        95 Jun  5 03:53 pilot_heartbeat.json
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc 176621601 Jun  5 03:53 HITS.45006595._055104.pool.root.1
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc       531 Jun  5 03:54 boinc_task_state.xml
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc      1016 Jun  5 03:54 memory_monitor_summary.json
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc   1598969 Jun  5 03:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc    373971 Jun  5 03:54 log.45006595._055104.job.log.tgz.1
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc      7695 Jun  5 03:54 heartbeat.json
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:54 wrapper_checkpoint.txt
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:54 boinc_mmap_file
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc      4540 Jun  5 03:54 pilotlog.txt
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc   1203656 Jun  5 03:54 log.45006595._055104.job.log.1
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc       357 Jun  5 03:54 output.list
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc       620 Jun  5 03:54 runtime_log
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc   1597440 Jun  5 03:54 result.tar.gz
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc      8673 Jun  5 03:54 runtime_log.err
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc       656 Jun  5 03:54 pS0NDmFtxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqfnKDmhtvgTm.diag
[2025-06-05 03:54:42] -rw-r--r--. 1 boinc boinc     20508 Jun  5 03:54 stderr.txt
[2025-06-05 03:54:42] HITS file was successfully produced:
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc 176621601 Jun  5 03:53 shared/HITS.pool.root.1
[2025-06-05 03:54:42]  *** Contents of shared directory: ***
[2025-06-05 03:54:42] total 386472
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc 216997264 Jun  4 23:55 ATLAS.root_0
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 23:55 start_atlas.sh
[2025-06-05 03:54:42] -rw-r--r--. 2 boinc boinc    508886 Jun  4 23:55 input.tar.gz
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc 176621601 Jun  5 03:53 HITS.pool.root.1
[2025-06-05 03:54:42] -rw-------. 1 boinc boinc   1597440 Jun  5 03:54 result.tar.gz
03:54:43 (3929): run_atlas exited; CPU time 51114.433201
03:54:43 (3929): called boinc_finish(0)

</stderr_txt>
]]>

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