Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 06:39:48 (10884): Detected: vboxwrapper 26206
2025-06-04 06:39:48 (10884): Detected: BOINC client v8.0.2
2025-06-04 06:39:49 (10884): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-06-04 06:39:49 (10884): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 06:39:49 (10884): Create VM. (boinc_162c576f4d7d5c3c, slot#12)
2025-06-04 06:39:50 (10884): Setting Memory Size for VM. (4800MB)
2025-06-04 06:39:50 (10884): Setting CPU Count for VM. (8)
2025-06-04 06:39:51 (10884): Setting Chipset Options for VM.
2025-06-04 06:39:51 (10884): Setting Graphics Controller Options for VM.
2025-06-04 06:39:51 (10884): Setting Boot Options for VM.
2025-06-04 06:39:51 (10884): Setting Network Configuration for NAT.
2025-06-04 06:39:52 (10884): Enabling VM Network Access.
2025-06-04 06:39:52 (10884): Disabling USB Support for VM.
2025-06-04 06:39:52 (10884): Disabling COM Port Support for VM.
2025-06-04 06:39:52 (10884): Disabling LPT Port Support for VM.
2025-06-04 06:39:53 (10884): Disabling Audio Support for VM.
2025-06-04 06:39:53 (10884): Disabling Clipboard Support for VM.
2025-06-04 06:39:53 (10884): Disabling Drag and Drop Support for VM.
2025-06-04 06:39:53 (10884): Adding storage controller(s) to VM.
2025-06-04 06:39:54 (10884): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 06:39:57 (10884): Adding VirtualBox Guest Additions to VM.
2025-06-04 06:39:57 (10884): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 06:39:57 (10884): forwarding host port 57261 to guest port 80
2025-06-04 06:39:57 (10884): Enabling remote desktop for VM.
2025-06-04 06:39:58 (10884): Enabling shared directory for VM.
2025-06-04 06:39:59 (10884): Starting VM using VBoxManage interface. (boinc_162c576f4d7d5c3c, slot#12)
2025-06-04 06:40:04 (10884): Successfully started VM. (PID = '13808')
2025-06-04 06:40:04 (10884): Reporting VM Process ID to BOINC.
2025-06-04 06:40:04 (10884): Guest Log: BIOS: VirtualBox 7.1.6
2025-06-04 06:40:04 (10884): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 06:40:04 (10884): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 06:40:04 (10884): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 06:40:04 (10884): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 06:40:04 (10884): Detected: Web Application Enabled (http://localhost:57261)
2025-06-04 06:40:04 (10884): Detected: Remote Desktop Enabled (localhost:57262)
2025-06-04 06:40:04 (10884): Preference change detected
2025-06-04 06:40:04 (10884): Setting CPU throttle for VM. (85%)
2025-06-04 06:40:04 (10884): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 06:40:06 (10884): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 06:40:06 (10884): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 06:40:09 (10884): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 06:40:09 (10884): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 06:40:09 (10884): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 06:40:20 (10884): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 06:40:20 (10884): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 06:40:29 (10884): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000185 main     Log opened 2025-06-04T06:40:27.171662000Z
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000283 main     OS Product: Linux
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000338 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000363 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000387 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000387 main     Process ID: 1378
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.000387 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 06:40:29 (10884): Guest Log: 00:00:00.002166 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 06:40:29 (10884): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 06:40:29 (10884): Guest Log: [INFO] Mounting shared directory
2025-06-04 06:40:29 (10884): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 06:40:39 (10884): Guest Log: 00:00:10.007034 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 176 873 000ns (GuestNow=1 749 044 438 352 164 000 ns GuestLast=1 749 019 227 175 291 000 ns fSetTimeLastLoop=true )
2025-06-04 06:40:41 (10884): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 06:40:41 (10884): Guest Log: [INFO] Detected branch: prod
2025-06-04 06:40:42 (10884): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 06:40:42 (10884): Guest Log: Copying input files
2025-06-04 06:40:43 (10884): Guest Log: Copied input files into RunAtlas.
2025-06-04 06:40:43 (10884): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 06:40:43 (10884): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 06:40:43 (10884): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 06:40:43 (10884): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 06:40:59 (10884): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 06:40:59 (10884): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 06:40:59 (10884): Guest Log: 2.6.3.0 1660 0 32044 146781 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 06:41:00 (10884): Guest Log: copied the webapp to /var/www
2025-06-04 06:41:00 (10884): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 06:41:00 (10884): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 06:41:00 (10884): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 06:41:00 (10884): Guest Log:  *** Starting ATLAS job. (PandaID=6679612156 taskID=45006595) ***
2025-06-04 08:20:10 (10884): Status Report: Elapsed Time: '6000.000000'
2025-06-04 08:20:10 (10884): Status Report: CPU Time: '38725.625000'
2025-06-04 08:32:01 (10884): Guest Log:  *** Job finished ***
2025-06-04 08:32:01 (10884): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:50,141 | INFO     | [data] copytool_out thread has finished
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:50,357 | INFO     | [payload] validate_post thread has finished
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:51,923 | INFO     | [data] queue_monitor thread has finished
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:53,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214978164544)>', '<ExcThread(monitor, started 140214156646144)>']
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:53,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:53,789 | INFO     | [monitor] control thread has ended
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,374 | INFO     | all workflow threads have been joined
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,374 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,374 | INFO     | traces error code: 0
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,507 [wrapper] ==== pilot stdout END ====
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,518 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,526 [wrapper] pilotpid: 6011
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,534 [wrapper] Pilot exit status: 0
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,618 [wrapper] pandaids: 6679612156
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,671 [wrapper] cleanup supervisor_pilot  4428 6012
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,685 [wrapper] Test setup, not cleaning
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,694 [wrapper] apfmon messages muted
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,702 [wrapper] ==== wrapper stdout END ====
2025-06-04 08:32:01 (10884): Guest Log: 2025-06-04 15:31:58,712 [wrapper] ==== wrapper stderr END ====
2025-06-04 08:32:01 (10884): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 08:32:01 (10884): Guest Log:     "exeErrorCode": 0,
2025-06-04 08:32:01 (10884): Guest Log:     "exeErrorDiag": "",
2025-06-04 08:32:01 (10884): Guest Log:     "pilotErrorCode": 0,
2025-06-04 08:32:01 (10884): Guest Log:     "pilotErrorDiag": "",
2025-06-04 08:32:01 (10884): Guest Log:  *** Listing of results directory ***
2025-06-04 08:32:01 (10884): Guest Log: total 173956
2025-06-04 08:32:01 (10884): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 10:07 pilot3.tar.gz
2025-06-04 08:32:01 (10884): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 10:10 runpilot2-wrapper.sh
2025-06-04 08:32:01 (10884): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 10:10 queuedata.json
2025-06-04 08:32:01 (10884): Guest Log: -rwxr-xr-x. 1 atlas atlas     12639 Jun  4 13:40 init_data.xml
2025-06-04 08:32:01 (10884): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Jun  4 13:40 input.tar.gz
2025-06-04 08:32:01 (10884): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 13:40 start_atlas.sh
2025-06-04 08:32:01 (10884): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 13:40 EVNT.45006593._001952.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 08:32:01 (10884): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 13:41 pandaJob.out
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas    986819 Jun  4 13:42 agis_schedconf.cvmfs.json
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 13:42 agis_ddmendpoints.agis.ALL.json
2025-06-04 08:32:01 (10884): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 13:42 pilot3
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas 172649221 Jun  4 15:30 HITS.45006595._056519.pool.root.1
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 15:31 pilot_heartbeat.json
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas      1028 Jun  4 15:31 memory_monitor_summary.json
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas    306329 Jun  4 15:31 log.45006595._056519.job.log.tgz.1
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas      7683 Jun  4 15:31 heartbeat.json
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  4 15:31 pilotlog.txt
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas    552933 Jun  4 15:31 log.45006595._056519.job.log.1
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 15:31 output.list
2025-06-04 08:32:01 (10884): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 15:31 runtime_log
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas    880640 Jun  4 15:31 result.tar.gz
2025-06-04 08:32:01 (10884): Guest Log: -rw-r--r--. 1 atlas atlas      8567 Jun  4 15:31 runtime_log.err
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas       649 Jun  4 15:31 JnjMDmDG0g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG2aKDmczZQin.diag
2025-06-04 08:32:01 (10884): Guest Log: Looking for outputfile HITS.45006595._056519.pool.root.1
2025-06-04 08:32:01 (10884): Guest Log: HITS file was successfully produced
2025-06-04 08:32:01 (10884): Guest Log: -rw-------. 1 atlas atlas 172649221 Jun  4 15:30 /home/atlas/RunAtlas/HITS.45006595._056519.pool.root.1
2025-06-04 08:32:03 (10884): Guest Log: Successfully finished the ATLAS job!
2025-06-04 08:32:03 (10884): Guest Log: Copying the results back to the shared directory!
2025-06-04 08:32:03 (10884): Guest Log:  *** Contents of shared directory: ***
2025-06-04 08:32:03 (10884): Guest Log: total 379444
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root 214473911 Jun  4 13:39 ATLAS.root_0
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root 172649221 Jun  4 15:32 HITS.pool.root.1
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root     12639 Jun  4 13:39 init_data.xml
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root    508885 Jun  4 13:38 input.tar.gz
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root    880640 Jun  4 15:32 result.tar.gz
2025-06-04 08:32:03 (10884): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 13:38 start_atlas.sh
2025-06-04 08:32:03 (10884): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 08:32:03 (10884): VM Completion File Detected.
2025-06-04 08:32:03 (10884): Powering off VM.
2025-06-04 08:32:04 (10884): Successfully stopped VM.
2025-06-04 08:32:04 (10884): Deregistering VM. (boinc_162c576f4d7d5c3c, slot#12)
2025-06-04 08:32:04 (10884): Removing network bandwidth throttle group from VM.
2025-06-04 08:32:04 (10884): Removing VM from VirtualBox.
08:32:09 (10884): called boinc_finish(0)

</stderr_txt>
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