Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 15:38:13 (792): Detected: vboxwrapper 26206
2025-06-04 15:38:13 (792): Detected: BOINC client v8.0.2
2025-06-04 15:38:14 (792): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-06-04 15:38:14 (792): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 15:38:15 (792): Create VM. (boinc_fc823e942a31d158, slot#0)
2025-06-04 15:38:15 (792): Setting Memory Size for VM. (4800MB)
2025-06-04 15:38:16 (792): Setting CPU Count for VM. (8)
2025-06-04 15:38:16 (792): Setting Chipset Options for VM.
2025-06-04 15:38:16 (792): Setting Graphics Controller Options for VM.
2025-06-04 15:38:16 (792): Setting Boot Options for VM.
2025-06-04 15:38:17 (792): Setting Network Configuration for NAT.
2025-06-04 15:38:17 (792): Enabling VM Network Access.
2025-06-04 15:38:17 (792): Disabling USB Support for VM.
2025-06-04 15:38:17 (792): Disabling COM Port Support for VM.
2025-06-04 15:38:18 (792): Disabling LPT Port Support for VM.
2025-06-04 15:38:18 (792): Disabling Audio Support for VM.
2025-06-04 15:38:18 (792): Disabling Clipboard Support for VM.
2025-06-04 15:38:18 (792): Disabling Drag and Drop Support for VM.
2025-06-04 15:38:19 (792): Adding storage controller(s) to VM.
2025-06-04 15:38:19 (792): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 15:38:22 (792): Adding VirtualBox Guest Additions to VM.
2025-06-04 15:38:22 (792): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 15:38:22 (792): forwarding host port 55889 to guest port 80
2025-06-04 15:38:23 (792): Enabling remote desktop for VM.
2025-06-04 15:38:23 (792): Enabling shared directory for VM.
2025-06-04 15:38:24 (792): Starting VM using VBoxManage interface. (boinc_fc823e942a31d158, slot#0)
2025-06-04 15:38:29 (792): Successfully started VM. (PID = '8456')
2025-06-04 15:38:29 (792): Reporting VM Process ID to BOINC.
2025-06-04 15:38:29 (792): Guest Log: BIOS: VirtualBox 7.0.22
2025-06-04 15:38:29 (792): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 15:38:29 (792): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 15:38:29 (792): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 15:38:29 (792): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 15:38:29 (792): Detected: Web Application Enabled (http://localhost:55889)
2025-06-04 15:38:29 (792): Detected: Remote Desktop Enabled (localhost:55890)
2025-06-04 15:38:29 (792): Preference change detected
2025-06-04 15:38:29 (792): Setting CPU throttle for VM. (100%)
2025-06-04 15:38:29 (792): Setting network throttle for VM. (5000KB)
2025-06-04 15:38:29 (792): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 15:38:31 (792): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 15:38:31 (792): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 15:38:34 (792): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 15:38:34 (792): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 15:38:34 (792): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 15:38:42 (792): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 15:38:42 (792): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 15:38:57 (792): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000096 main     Log opened 2025-06-04T15:38:55.639491000Z
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000167 main     OS Product: Linux
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000186 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000202 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000222 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000223 main     Process ID: 1366
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000223 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 15:38:57 (792): Guest Log: 00:00:00.000683 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 15:38:58 (792): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 15:38:58 (792): Guest Log: [INFO] Mounting shared directory
2025-06-04 15:38:58 (792): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 15:39:07 (792): Guest Log: 00:00:10.016752 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 339 725 000ns (GuestNow=1 749 044 347 302 697 000 ns GuestLast=1 749 051 535 642 422 000 ns fSetTimeLastLoop=true )
2025-06-04 15:39:35 (792): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 15:39:35 (792): Guest Log: [INFO] Detected branch: prod
2025-06-04 15:39:35 (792): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 15:39:35 (792): Guest Log: Copying input files
2025-06-04 15:39:36 (792): Guest Log: Copied input files into RunAtlas.
2025-06-04 15:39:36 (792): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 15:39:36 (792): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 15:39:36 (792): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 15:39:36 (792): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 15:40:26 (792): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 15:40:26 (792): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 15:40:26 (792): Guest Log: 2.6.3.0 1666 1 29580 146781 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-06-04 15:40:29 (792): Guest Log: copied the webapp to /var/www
2025-06-04 15:40:29 (792): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 15:40:29 (792): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 15:40:29 (792): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 15:40:29 (792): Guest Log:  *** Starting ATLAS job. (PandaID=6679612150 taskID=45006595) ***
2025-06-04 16:29:16 (792): Guest Log:  *** Job finished ***
2025-06-04 16:29:16 (792): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:02,420 | INFO     | [data] queue_monitor thread has finished
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:08,426 | INFO     | job.realtimelogging is not enabled
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:09,428 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:09,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531138312000)>', '<ExcThread(monitor, started 140530113570560)>']
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:10,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:10,691 | INFO     | [monitor] control thread has ended
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,669 | INFO     | all workflow threads have been joined
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,669 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,669 | INFO     | traces error code: 0
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,788 [wrapper] ==== pilot stdout END ====
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,792 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,795 [wrapper] pilotpid: 6054
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,798 [wrapper] Pilot exit status: 0
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,958 [wrapper] pandaids: 6679612150
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,980 [wrapper] cleanup supervisor_pilot   629 6055
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,983 [wrapper] Test setup, not cleaning
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,987 [wrapper] apfmon messages muted
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,992 [wrapper] ==== wrapper stdout END ====
2025-06-04 16:29:16 (792): Guest Log: 2025-06-04 14:29:14,995 [wrapper] ==== wrapper stderr END ====
2025-06-04 16:29:16 (792): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 16:29:16 (792): Guest Log:     "exeErrorCode": 0,
2025-06-04 16:29:16 (792): Guest Log:     "exeErrorDiag": "",
2025-06-04 16:29:16 (792): Guest Log:     "pilotErrorCode": 0,
2025-06-04 16:29:16 (792): Guest Log:     "pilotErrorDiag": "",
2025-06-04 16:29:16 (792): Guest Log:  *** Listing of results directory ***
2025-06-04 16:29:17 (792): Guest Log: total 182016
2025-06-04 16:29:17 (792): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 10:07 pilot3.tar.gz
2025-06-04 16:29:17 (792): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 10:10 runpilot2-wrapper.sh
2025-06-04 16:29:17 (792): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 10:10 queuedata.json
2025-06-04 16:29:17 (792): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 13:39 start_atlas.sh
2025-06-04 16:29:17 (792): Guest Log: -rwxr-xr-x. 1 atlas atlas    508886 Jun  4 13:39 input.tar.gz
2025-06-04 16:29:17 (792): Guest Log: -rwxr-xr-x. 1 atlas atlas      9232 Jun  4 13:39 init_data.xml
2025-06-04 16:29:17 (792): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 13:39 EVNT.45006593._001717.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 16:29:17 (792): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 13:40 pandaJob.out
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas    986819 Jun  4 13:44 agis_schedconf.cvmfs.json
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 13:44 agis_ddmendpoints.agis.ALL.json
2025-06-04 16:29:17 (792): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 13:44 pilot3
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas 181534890 Jun  4 14:28 HITS.45006595._056513.pool.root.1
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 14:28 pilot_heartbeat.json
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  4 14:28 memory_monitor_summary.json
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas    271844 Jun  4 14:28 log.45006595._056513.job.log.tgz.1
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas      7703 Jun  4 14:28 heartbeat.json
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  4 14:29 pilotlog.txt
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas    267655 Jun  4 14:29 log.45006595._056513.job.log.1
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 14:29 output.list
2025-06-04 16:29:17 (792): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 14:29 runtime_log
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas    563200 Jun  4 14:29 result.tar.gz
2025-06-04 16:29:17 (792): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Jun  4 14:29 runtime_log.err
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas       669 Jun  4 14:29 bMcMDmDG0g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmA2aKDmawOGUo.diag
2025-06-04 16:29:17 (792): Guest Log: Looking for outputfile HITS.45006595._056513.pool.root.1
2025-06-04 16:29:17 (792): Guest Log: HITS file was successfully produced
2025-06-04 16:29:17 (792): Guest Log: -rw-------. 1 atlas atlas 181534890 Jun  4 14:28 /home/atlas/RunAtlas/HITS.45006595._056513.pool.root.1
2025-06-04 16:29:17 (792): Guest Log: Successfully finished the ATLAS job!
2025-06-04 16:29:17 (792): Guest Log: Copying the results back to the shared directory!
2025-06-04 16:29:17 (792): Guest Log:  *** Contents of shared directory: ***
2025-06-04 16:29:17 (792): Guest Log: total 389084
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root 215773786 Jun  4 13:38 ATLAS.root_0
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root 181534890 Jun  4  2025 HITS.pool.root.1
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root      9232 Jun  4 13:38 init_data.xml
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root    508886 Jun  4 13:37 input.tar.gz
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root    563200 Jun  4  2025 result.tar.gz
2025-06-04 16:29:17 (792): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 13:37 start_atlas.sh
2025-06-04 16:29:17 (792): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 16:29:17 (792): VM Completion File Detected.
2025-06-04 16:29:17 (792): Powering off VM.
2025-06-04 16:29:18 (792): Successfully stopped VM.
2025-06-04 16:29:18 (792): Deregistering VM. (boinc_fc823e942a31d158, slot#0)
2025-06-04 16:29:18 (792): Removing network bandwidth throttle group from VM.
2025-06-04 16:29:18 (792): Removing VM from VirtualBox.
16:29:23 (792): called boinc_finish(0)

</stderr_txt>
]]>

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