Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:40 (752370): wrapper (7.7.26015): starting
09:35:40 (752370): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:35:40] Arguments: --nthreads 8
[2025-06-04 09:35:40] Threads: 8
[2025-06-04 09:35:40] Checking for CVMFS
[2025-06-04 09:35:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:35:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:35:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:35:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:35:40] 2.12.6.0 5013 37379 649660 146781 2 244 32082592 32935936 11354 16776704 1 533396811 99.688 415287137 36145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:35:40] CVMFS is ok
[2025-06-04 09:35:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:35:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:35:40] Further information can be found at the LHC@home message board.
[2025-06-04 09:35:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:35:40] Checking for apptainer binary...
[2025-06-04 09:35:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:35:40] Running /usr/bin/apptainer --version
[2025-06-04 09:35:40] apptainer version 1.4.1-1.el9
[2025-06-04 09:35:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:35:40] c7-9-15.aglt2.org
[2025-06-04 09:35:40] apptainer works
[2025-06-04 09:35:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:35:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:35:40] Starting ATLAS job with PandaID=6679612476
[2025-06-04 09:35:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:12:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:12:38]  status_code=0
[2025-06-04 10:12:38]  storage_token=
[2025-06-04 10:12:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679612476/log.45006595._056525.job.log.tgz.1
[2025-06-04 10:12:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/75/log.45006595._056525.job.log.tgz.1
[2025-06-04 10:12:38]  workdir=None
[2025-06-04 10:12:38] ]
[2025-06-04 10:12:38] 2025-06-04 14:12:12,974 | INFO     | transferring file log.45006595._056525.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/log.45006595._056525.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:12:38] 2025-06-04 14:12:12,974 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/log.45006595._056525.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056525.job
[2025-06-04 10:12:38] 2025-06-04 14:12:12,988 | INFO     | adding to output.list: log.45006595._056525.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/75/log.45006595._056525.job.log.tg
[2025-06-04 10:12:38] 2025-06-04 14:12:12,988 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:12:38] 2025-06-04 14:12:12,988 | INFO     | summary of transferred files:
[2025-06-04 10:12:38] 2025-06-04 14:12:12,988 | INFO     |  -- lfn=log.45006595._056525.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:12:38] 2025-06-04 14:12:12,988 | INFO     | stage-out finished correctly
[2025-06-04 10:12:38] 2025-06-04 14:12:13,020 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | job 6679612476 has state=finished
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | preparing for final server update for job 6679612476 in state='finished'
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | job 6679612476 has finished - writing final server update
[2025-06-04 10:12:38] 2025-06-04 14:12:15,864 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:12:38] 2025-06-04 14:12:15,881 | INFO     | executing command: lscpu
[2025-06-04 10:12:38] 2025-06-04 14:12:15,958 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:12:38] 2025-06-04 14:12:18,094 | WARNING  | process 762515 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:12:38] 2025-06-04 14:12:18,095 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,095 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,095 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3698584 B
[2025-06-04 10:12:38] 2025-06-04 14:12:18,095 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15785 B
[2025-06-04 10:12:38] 2025-06-04 14:12:18,096 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,549 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:12:38] 2025-06-04 14:12:18,550 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,553 | INFO     | extracted standard info from prmon json
[2025-06-04 10:12:38] 2025-06-04 14:12:18,553 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:12:38] 2025-06-04 14:12:18,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:12:38] 2025-06-04 14:12:18,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:12:38] 2025-06-04 14:12:18,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | sum of square deviations: 7553630.0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | sum of deviations: 3331778825.0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | mean x: 1749045326.0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | mean y: 2164279.0689655175
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | -- intersect: -771472236920.3573
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | intersect: -771472236920.3573
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | chi2: 0.6108516478818673
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | -- intersect: -771472236920.3573
[2025-06-04 10:12:38] 2025-06-04 14:12:18,555 | INFO     | current memory leak: 441.08 B/s (using 29 data points, chi2=0.61)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | ..............................
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . Timing measurements:
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . get job = 0 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . initial setup = 2 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . payload setup = 3 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . stage-in = 0 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . payload execution = 2165 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . stage-out = 0 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | . log creation = 0 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,556 | INFO     | ..............................
[2025-06-04 10:12:38] 2025-06-04 14:12:18,589 | INFO     | 
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | sufficient remaining disk space (74804363264 B)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | job summary report
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | --------------------------------------------------
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | PanDA job id: 6679612476
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | task id: 45006595
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | errors: (none)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | pilot state: finished 
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | transexitcode: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | exeerrorcode: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | exeerrordiag: 
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | exitcode: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | exitmsg: OK
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | cpuconsumptiontime: 13063 s
[2025-06-04 10:12:38] 2025-06-04 14:12:18,590 | INFO     | nevents: 400
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | neventsw: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | pid: 762515
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | pgrp: 762515
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | corecount: 8
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | event service: False
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | sizes: {0: 2397289, 3: 2397495, 11: 2397523, 2172: 2422538, 2173: 2431535, 2179: 2431649}
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | --------------------------------------------------
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | 
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:12:38] 2025-06-04 14:12:18,591 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,595 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6679612476: 3980363 B (within 2537553920 B limit)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,596 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6679612476/HITS.45006595._056525.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,596 | INFO     | total size of present files: 0 B (workdir size: 3980363 B)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,596 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6679612476/HITS.45006595._056525.pool.root.1 since it does not exist
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | job 6679612476 has completed (purged errors)
[2025-06-04 10:12:38] 2025-06-04 14:12:18,605 | INFO     | overall cleanup function is called
[2025-06-04 10:12:38] 2025-06-04 14:12:18,794 | INFO     | number of running child processes to parent process 762515: 1
[2025-06-04 10:12:38] 2025-06-04 14:12:18,794 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:12:38] 2025-06-04 14:12:18,794 | INFO     | aborting job monitoring since job object (job id=6679612476) has expired
[2025-06-04 10:12:38] 2025-06-04 14:12:19,612 | INFO     | --- collectZombieJob: --- 10, [762515]
[2025-06-04 10:12:38] 2025-06-04 14:12:19,612 | INFO     | zombie collector waiting for pid 762515
[2025-06-04 10:12:38] 2025-06-04 14:12:19,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:12:38] 2025-06-04 14:12:19,612 | INFO     | collected zombie processes
[2025-06-04 10:12:38] 2025-06-04 14:12:19,612 | INFO     | will attempt to kill all subprocesses of pid=762515
[2025-06-04 10:12:38] 2025-06-04 14:12:19,812 | INFO     | process IDs to be killed: [762515] (in reverse order)
[2025-06-04 10:12:38] 2025-06-04 14:12:19,896 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:12:38] 2025-06-04 14:12:19,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:12:38] 2025-06-04 14:12:19,910 | INFO     | did not find any defunct processes belonging to 762515
[2025-06-04 10:12:38] 2025-06-04 14:12:19,924 | INFO     | did not find any defunct processes belonging to 762515
[2025-06-04 10:12:38] 2025-06-04 14:12:19,924 | INFO     | ready for new job
[2025-06-04 10:12:38] 2025-06-04 14:12:19,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:12:38] 2025-06-04 14:12:19,925 | INFO     | **************************************
[2025-06-04 10:12:38] 2025-06-04 14:12:19,925 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:12:38] 2025-06-04 14:12:19,925 | INFO     | **************************************
[2025-06-04 10:12:38] 2025-06-04 14:12:19,925 | INFO     | 
[2025-06-04 10:12:38] 2025-06-04 14:12:19,941 | INFO     | architecture information:
[2025-06-04 10:12:38] 2025-06-04 14:12:19,941 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:12:38] 2025-06-04 14:12:19,950 | INFO     | cat /etc/os-release:
[2025-06-04 10:12:38] NAME="CentOS Linux"
[2025-06-04 10:12:38] VERSION="7 (Core)"
[2025-06-04 10:12:38] ID="centos"
[2025-06-04 10:12:38] ID_LIKE="rhel fedora"
[2025-06-04 10:12:38] VERSION_ID="7"
[2025-06-04 10:12:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:12:38] ANSI_COLOR="0;31"
[2025-06-04 10:12:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:12:38] HOME_URL="https://www.centos.org/"
[2025-06-04 10:12:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:12:38] 
[2025-06-04 10:12:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:12:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:12:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:12:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:12:38] 
[2025-06-04 10:12:38] 2025-06-04 14:12:19,950 | INFO     | **************************************
[2025-06-04 10:12:38] 2025-06-04 14:12:20,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:12:38] 2025-06-04 14:12:20,463 | INFO     | sufficient remaining disk space (74807508992 B)
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | INFO     | update_server=False
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:12:38] 2025-06-04 14:12:20,464 | INFO     | aborting loop
[2025-06-04 10:12:38] 2025-06-04 14:12:20,713 | INFO     | all data control threads have been joined
[2025-06-04 10:12:38] 2025-06-04 14:12:21,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:12:38] 2025-06-04 14:12:21,178 | INFO     | PID=755989 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 10:12:38] 2025-06-04 14:12:21,178 | INFO     | .. there are 23 such processes running
[2025-06-04 10:12:38] 2025-06-04 14:12:21,178 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:12:38] 2025-06-04 14:12:21,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:12:38] 2025-06-04 14:12:21,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:12:38] 2025-06-04 14:12:21,466 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,470 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,470 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,488 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,550 | INFO     | all job control threads have been joined
[2025-06-04 10:12:38] 2025-06-04 14:12:21,575 | INFO     | all payload control threads have been joined
[2025-06-04 10:12:38] 2025-06-04 14:12:21,689 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,695 | INFO     | [job] validate thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,719 | INFO     | [data] control thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,837 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:21,979 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:22,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:22,555 | INFO     | [job] control thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:22,581 | INFO     | [payload] control thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:23,037 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:23,062 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:23,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:12:38] 2025-06-04 14:12:27,582 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:31,310 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:12:38] 2025-06-04 14:12:32,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:12:38] 2025-06-04 14:12:33,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612561618752)>', '<ExcThread(monitor, started 140611785058048)>']
[2025-06-04 10:12:38] 2025-06-04 14:12:34,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:12:38] 2025-06-04 14:12:34,241 | INFO     | [monitor] control thread has ended
[2025-06-04 10:12:38] 2025-06-04 14:12:38,616 | INFO     | all workflow threads have been joined
[2025-06-04 10:12:38] 2025-06-04 14:12:38,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:12:38] 2025-06-04 14:12:38,617 | INFO     | traces error code: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:38,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:12:38] 2025-06-04 14:12:38,678 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:12:38] 2025-06-04 14:12:38,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:12:38] 2025-06-04 14:12:38,682 [wrapper] pilotpid: 755989
[2025-06-04 10:12:38] 2025-06-04 14:12:38,683 [wrapper] Pilot exit status: 0
[2025-06-04 10:12:38] 2025-06-04 14:12:38,690 [wrapper] pandaids: 6679612476
[2025-06-04 10:12:38] 2025-06-04 14:12:38,755 [wrapper] cleanup supervisor_pilot 1001499 755990
[2025-06-04 10:12:38] 2025-06-04 14:12:38,757 [wrapper] Test setup, not cleaning
[2025-06-04 10:12:38] 2025-06-04 14:12:38,759 [wrapper] apfmon messages muted
[2025-06-04 10:12:38] 2025-06-04 14:12:38,760 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:12:38] 2025-06-04 14:12:38,762 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:12:38]  *** Error codes and diagnostics ***
[2025-06-04 10:12:38]     "exeErrorCode": 0,
[2025-06-04 10:12:38]     "exeErrorDiag": "",
[2025-06-04 10:12:38]     "pilotErrorCode": 0,
[2025-06-04 10:12:38]     "pilotErrorDiag": "",
[2025-06-04 10:12:38]  *** Listing of results directory ***
[2025-06-04 10:12:38] total 387912
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 06:07 pilot3.tar.gz
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 06:10 queuedata.json
[2025-06-04 10:12:38] -rwx------. 1 boincer umatlas     37140 Jun  4 06:13 runpilot2-wrapper.sh
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:12:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:35 run_atlas
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:35 job.xml
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas 216808247 Jun  4 09:35 EVNT.45006593._000833.pool.root.1
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:12:38] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:35 shared
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:35 input.tar.gz
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:35 boinc_lockfile
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 09:35 pandaJob.out
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas    986819 Jun  4 09:35 agis_schedconf.cvmfs.json
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:12:38] drwx------. 4 boincer umatlas      4096 Jun  4 09:35 pilot3
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas        95 Jun  4 10:11 pilot_heartbeat.json
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas 175510444 Jun  4 10:11 HITS.45006595._056525.pool.root.1
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas       529 Jun  4 10:11 boinc_task_state.xml
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas      1028 Jun  4 10:12 memory_monitor_summary.json
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas    293164 Jun  4 10:12 log.45006595._056525.job.log.tgz.1
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas      7681 Jun  4 10:12 heartbeat.json
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 10:12 init_data.xml
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:12 wrapper_checkpoint.txt
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:12 boinc_mmap_file
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas      4819 Jun  4 10:12 pilotlog.txt
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas    245325 Jun  4 10:12 log.45006595._056525.job.log.1
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas       357 Jun  4 10:12 output.list
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:12 runtime_log
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas    552960 Jun  4 10:12 result.tar.gz
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas       646 Jun  4 10:12 woMMDm9I0g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmixnKDmvG0XDn.diag
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 10:12 runtime_log.err
[2025-06-04 10:12:38] -rw-r--r--. 1 boincer umatlas     22329 Jun  4 10:12 stderr.txt
[2025-06-04 10:12:38] HITS file was successfully produced:
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas 175510444 Jun  4 10:11 shared/HITS.pool.root.1
[2025-06-04 10:12:38]  *** Contents of shared directory: ***
[2025-06-04 10:12:38] total 384192
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas 216808247 Jun  4 09:35 ATLAS.root_0
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:12:38] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 09:35 input.tar.gz
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas 175510444 Jun  4 10:11 HITS.pool.root.1
[2025-06-04 10:12:38] -rw-------. 1 boincer umatlas    552960 Jun  4 10:12 result.tar.gz
10:12:40 (752370): run_atlas exited; CPU time 13092.371192
10:12:40 (752370): called boinc_finish(0)

</stderr_txt>
]]>

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