Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:06:14 (23875): wrapper (7.7.26015): starting
01:06:14 (23875): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:06:14] Arguments: --nthreads 8
[2025-06-05 01:06:14] Threads: 8
[2025-06-05 01:06:14] Checking for CVMFS
[2025-06-05 01:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:06:16] 2.11.2.0 22804 33853 91208 146797 2 60 19727691 25165824 3520 130560 0 17764568 99.813 20145020 2113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:06:16] CVMFS is ok
[2025-06-05 01:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:06:16] Checking for apptainer binary...
[2025-06-05 01:06:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:06:16] Running /usr/bin/apptainer --version
[2025-06-05 01:06:16] apptainer version 1.3.2-1.el7
[2025-06-05 01:06:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:06:26] cg-vwn352.simple-grid.lan
[2025-06-05 01:06:26] apptainer works
[2025-06-05 01:06:26] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:06:26] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:06:26] Starting ATLAS job with PandaID=6678391641
[2025-06-05 01:06:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:04:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:04:19] 2025-06-05 03:04:04,437 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:04:19] 2025-06-05 03:04:04,438 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,440 | INFO     | sum of deviations: 21171863560.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,440 | INFO     | mean x: 1749085758.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,440 | INFO     | mean y: 2471646.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,440 | INFO     | -- intersect: -10343587379.63442
[2025-06-05 05:04:19] 2025-06-05 03:04:04,440 | INFO     | intersect: -10343587379.63442
[2025-06-05 05:04:19] 2025-06-05 03:04:04,441 | INFO     | chi2: 2.3704954837522854
[2025-06-05 05:04:19] 2025-06-05 03:04:04,441 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,443 | INFO     | sum of deviations: 35434353806.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,443 | INFO     | mean x: 1749085606.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,443 | INFO     | mean y: 2480831.4027149323
[2025-06-05 05:04:19] 2025-06-05 03:04:04,443 | INFO     | -- intersect: -18515312382.941616
[2025-06-05 05:04:19] 2025-06-05 03:04:04,443 | INFO     | intersect: -18515312382.941616
[2025-06-05 05:04:19] 2025-06-05 03:04:04,444 | INFO     | chi2: 1.5982275320739767
[2025-06-05 05:04:19] 2025-06-05 03:04:04,444 | INFO     | current chi2=1.5982275320739767 (change=32.578334654992744 %)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,444 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,446 | INFO     | sum of deviations: 34475648770.00001
[2025-06-05 05:04:19] 2025-06-05 03:04:04,446 | INFO     | mean x: 1749085453.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,446 | INFO     | mean y: 2480172.935185185
[2025-06-05 05:04:19] 2025-06-05 03:04:04,446 | INFO     | -- intersect: -19294666890.47231
[2025-06-05 05:04:19] 2025-06-05 03:04:04,446 | INFO     | intersect: -19294666890.47231
[2025-06-05 05:04:19] 2025-06-05 03:04:04,447 | INFO     | chi2: 1.5990295742534952
[2025-06-05 05:04:19] 2025-06-05 03:04:04,447 | INFO     | current chi2=1.5990295742534952 (change=-0.05018322882210179 %)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,447 | INFO     | right removable region: 215
[2025-06-05 05:04:19] 2025-06-05 03:04:04,447 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,449 | INFO     | sum of deviations: -17476053236.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,449 | INFO     | mean x: 1749085911.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,449 | INFO     | mean y: 2496834.5022624433
[2025-06-05 05:04:19] 2025-06-05 03:04:04,450 | INFO     | -- intersect: 9135385167.400084
[2025-06-05 05:04:19] 2025-06-05 03:04:04,450 | INFO     | intersect: 9135385167.400084
[2025-06-05 05:04:19] 2025-06-05 03:04:04,450 | INFO     | chi2: 0.8589452346761681
[2025-06-05 05:04:19] 2025-06-05 03:04:04,450 | INFO     | current chi2=0.8589452346761681 (change=63.76516046693607 %)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,451 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,452 | INFO     | sum of deviations: -23905416148.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | mean x: 1749086063.5
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | mean y: 2501213.5555555555
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | -- intersect: 13383148376.41954
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | intersect: 13383148376.41954
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | chi2: 0.8069501392889565
[2025-06-05 05:04:19] 2025-06-05 03:04:04,453 | INFO     | current chi2=0.8069501392889565 (change=6.053365603316295 %)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,454 | INFO     | left removable region: 20
[2025-06-05 05:04:19] 2025-06-05 03:04:04,454 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,455 | INFO     | sum of deviations: -8674726674.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,455 | INFO     | mean x: 1749086033.0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | mean y: 2511147.651282051
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | -- intersect: 6601784759.70884
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | intersect: 6601784759.70884
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | chi2: 0.014541800975290878
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | -- intersect: 6601784759.70884
[2025-06-05 05:04:19] 2025-06-05 03:04:04,456 | INFO     | current memory leak: -3.77 B/s (using 195 data points, chi2=0.01)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,457 | INFO     | ..............................
[2025-06-05 05:04:19] 2025-06-05 03:04:04,457 | INFO     | . Timing measurements:
[2025-06-05 05:04:19] 2025-06-05 03:04:04,458 | INFO     | . get job = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,458 | INFO     | . initial setup = 9 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,458 | INFO     | . payload setup = 85 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,458 | INFO     | . stage-in = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,459 | INFO     | . payload execution = 13762 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,459 | INFO     | . stage-out = 1 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,459 | INFO     | . log creation = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,459 | INFO     | ..............................
[2025-06-05 05:04:19] 2025-06-05 03:04:04,458 | INFO     | monitor loop #993: job 0:6678391641 is in state 'finished'
[2025-06-05 05:04:19] 2025-06-05 03:04:04,491 | WARNING  | exception caught: deque index out of range
[2025-06-05 05:04:19] 2025-06-05 03:04:04,581 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:04:04,581 | INFO     | job summary report
[2025-06-05 05:04:19] 2025-06-05 03:04:04,581 | INFO     | --------------------------------------------------
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | PanDA job id: 6678391641
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | task id: 45006595
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | errors: (none)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | pilot state: finished 
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | transexitcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | exeerrorcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | exeerrordiag: 
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | exitcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | exitmsg: OK
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | cpuconsumptiontime: 52274 s
[2025-06-05 05:04:19] 2025-06-05 03:04:04,582 | INFO     | nevents: 400
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | neventsw: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | pid: 8353
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | pgrp: 8353
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | corecount: 8
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | event service: False
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | sizes: {0: 2397115, 1: 2397370, 12: 2397370, 23: 2397398, 34: 2397426, 44: 2397454, 55: 2397610, 66: 2397638, 77: 2397666, 87: 2397722, 92: 2397956, 98: 2398264, 1
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | --------------------------------------------------
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:04:04,583 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 05:04:19] 2025-06-05 03:04:04,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | job 6678391641 has completed (purged errors)
[2025-06-05 05:04:19] 2025-06-05 03:04:04,666 | INFO     | overall cleanup function is called
[2025-06-05 05:04:19] 2025-06-05 03:04:05,559 | INFO     | PID=30214 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 05:04:19] 2025-06-05 03:04:05,559 | INFO     | .. there are 9 such processes running
[2025-06-05 05:04:19] 2025-06-05 03:04:05,675 | INFO     | --- collectZombieJob: --- 10, [8353]
[2025-06-05 05:04:19] 2025-06-05 03:04:05,675 | INFO     | zombie collector waiting for pid 8353
[2025-06-05 05:04:19] 2025-06-05 03:04:05,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:04:19] 2025-06-05 03:04:05,675 | INFO     | collected zombie processes
[2025-06-05 05:04:19] 2025-06-05 03:04:05,675 | INFO     | will attempt to kill all subprocesses of pid=8353
[2025-06-05 05:04:19] 2025-06-05 03:04:05,785 | INFO     | process IDs to be killed: [8353] (in reverse order)
[2025-06-05 05:04:19] 2025-06-05 03:04:06,365 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:04:19] 2025-06-05 03:04:06,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:04:19] 2025-06-05 03:04:06,369 | INFO     | did not find any defunct processes belonging to 8353
[2025-06-05 05:04:19] 2025-06-05 03:04:06,374 | INFO     | did not find any defunct processes belonging to 8353
[2025-06-05 05:04:19] 2025-06-05 03:04:06,374 | INFO     | ready for new job
[2025-06-05 05:04:19] 2025-06-05 03:04:06,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:04:19] 2025-06-05 03:04:06,376 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:06,377 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:04:19] 2025-06-05 03:04:06,377 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:06,377 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:04:06,377 | INFO     | pilot is running in a VM
[2025-06-05 05:04:19] 2025-06-05 03:04:06,378 | INFO     | architecture information:
[2025-06-05 05:04:19] 2025-06-05 03:04:06,378 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:04:19] 2025-06-05 03:04:06,405 | INFO     | cat /etc/os-release:
[2025-06-05 05:04:19] NAME="CentOS Linux"
[2025-06-05 05:04:19] VERSION="7 (Core)"
[2025-06-05 05:04:19] ID="centos"
[2025-06-05 05:04:19] ID_LIKE="rhel fedora"
[2025-06-05 05:04:19] VERSION_ID="7"
[2025-06-05 05:04:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:04:19] ANSI_COLOR="0;31"
[2025-06-05 05:04:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:04:19] HOME_URL="https://www.centos.org/"
[2025-06-05 05:04:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:04:19] 
[2025-06-05 05:04:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:04:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:04:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:04:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:04:19] 
[2025-06-05 05:04:19] 2025-06-05 03:04:06,406 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:06,909 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 05:04:19] 2025-06-05 03:04:06,946 | INFO     | sufficient remaining disk space (497257807872 B)
[2025-06-05 05:04:19] 2025-06-05 03:04:06,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:04:19] 2025-06-05 03:04:06,946 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:04:19] 2025-06-05 03:04:06,947 | INFO     | update_server=False
[2025-06-05 05:04:19] 2025-06-05 03:04:06,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:04:19] 2025-06-05 03:04:06,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:07,003 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 05:04:19] 2025-06-05 03:04:07,003 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 05:04:19] 2025-06-05 03:04:07,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:07,003 | INFO     | will abort loop
[2025-06-05 05:04:19] 2025-06-05 03:04:07,175 | INFO     | all payload control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:07,318 | INFO     | all job control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:07,378 | INFO     | all data control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:07,567 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:04:19] 2025-06-05 03:04:07,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:04:19] 2025-06-05 03:04:07,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:04:19] 2025-06-05 03:04:07,953 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:07,968 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,010 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,133 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,141 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,181 | INFO     | [payload] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,323 | INFO     | [job] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,383 | INFO     | [data] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,625 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:08,901 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,911 | INFO     | [job] validate thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:08,955 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:09,255 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:09,307 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:09,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:10,601 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:12,717 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:13,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628127536960)>', '<ExcThread(monitor, started 140627538855680)>']
[2025-06-05 05:04:19] 2025-06-05 03:04:14,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:04:19] 2025-06-05 03:04:14,603 | INFO     | [monitor] control thread has ended
[2025-06-05 05:04:19] 2025-06-05 03:04:18,695 | INFO     | all workflow threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:18,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:04:19] 2025-06-05 03:04:18,695 | INFO     | traces error code: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:18,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:04:19] 2025-06-05 03:04:18,973 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:04:19] 2025-06-05 03:04:18,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:04:19] 2025-06-05 03:04:19,006 [wrapper] pilotpid: 30214
[2025-06-05 05:04:19] 2025-06-05 03:04:19,018 [wrapper] Pilot exit status: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:19,133 [wrapper] pandaids: 6678391641
[2025-06-05 05:04:19] 2025-06-05 03:04:19,208 [wrapper] cleanup supervisor_pilot  4918 30215
[2025-06-05 05:04:19] 2025-06-05 03:04:19,231 [wrapper] Test setup, not cleaning
[2025-06-05 05:04:19] 2025-06-05 03:04:19,244 [wrapper] apfmon messages muted
[2025-06-05 05:04:19] 2025-06-05 03:04:19,249 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:04:19] 2025-06-05 03:04:19,252 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:04:19]  *** Error codes and diagnostics ***
[2025-06-05 05:04:19]     "exeErrorCode": 0,
[2025-06-05 05:04:19]     "exeErrorDiag": "",
[2025-06-05 05:04:19]     "pilotErrorCode": 0,
[2025-06-05 05:04:19]     "pilotErrorDiag": "",
[2025-06-05 05:04:19]  *** Listing of results directory ***
[2025-06-05 05:04:19] total 401940
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 05:04:19] -rwx------. 1 boinc boinc     37140 Jun  4 09:37 runpilot2-wrapper.sh
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:37 queuedata.json
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:04:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:06 run_atlas
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:06 job.xml
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc 219182111 Jun  5 01:06 EVNT.45006593._002201.pool.root.1
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc      6392 Jun  5 01:06 init_data.xml
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:06 start_atlas.sh
[2025-06-05 05:04:19] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:06 shared
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc    508879 Jun  5 01:06 input.tar.gz
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:06 boinc_lockfile
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:06 pandaJob.out
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc    987032 Jun  5 01:09 agis_schedconf.cvmfs.json
[2025-06-05 05:04:19] drwx------. 4 boinc boinc      4096 Jun  5 01:09 pilot3
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc 185430634 Jun  5 05:03 HITS.45006595._055003.pool.root.1
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc        95 Jun  5 05:03 pilot_heartbeat.json
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:03 boinc_task_state.xml
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc      1017 Jun  5 05:03 memory_monitor_summary.json
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc   1598969 Jun  5 05:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc    376110 Jun  5 05:03 log.45006595._055003.job.log.tgz.1
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc      7686 Jun  5 05:04 heartbeat.json
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:04 boinc_mmap_file
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:04 wrapper_checkpoint.txt
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc      4602 Jun  5 05:04 pilotlog.txt
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc   1203493 Jun  5 05:04 log.45006595._055003.job.log.1
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc       357 Jun  5 05:04 output.list
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:04 runtime_log
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc   1597440 Jun  5 05:04 result.tar.gz
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:04 runtime_log.err
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc       656 Jun  5 05:04 BnINDmQrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6enKDmFSnQNo.diag
[2025-06-05 05:04:19] -rw-r--r--. 1 boinc boinc     20599 Jun  5 05:04 stderr.txt
[2025-06-05 05:04:19] HITS file was successfully produced:
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc 185430634 Jun  5 05:03 shared/HITS.pool.root.1
[2025-06-05 05:04:19]  *** Contents of shared directory: ***
[2025-06-05 05:04:19] total 397212
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc 219182111 Jun  5 01:06 ATLAS.root_0
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:06 start_atlas.sh
[2025-06-05 05:04:19] -rw-r--r--. 2 boinc boinc    508879 Jun  5 01:06 input.tar.gz
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc 185430634 Jun  5 05:03 HITS.pool.root.1
[2025-06-05 05:04:19] -rw-------. 1 boinc boinc   1597440 Jun  5 05:04 result.tar.gz
05:04:20 (23875): run_atlas exited; CPU time 52457.984920
05:04:20 (23875): called boinc_finish(0)

</stderr_txt>
]]>

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