Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:46:40 (2267337): wrapper (7.7.26015): starting
15:46:40 (2267337): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 15:46:40] Arguments: --nthreads 12
[2025-06-04 15:46:40] Threads: 12
[2025-06-04 15:46:40] Checking for CVMFS
[2025-06-04 15:46:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:46:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:46:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:46:43] 2.12.7.0 29207 2107 76532 146786 3 187 2221332 4096001 16510 130560 17 27249470 99.999 545322 139 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 15:46:43] CVMFS is ok
[2025-06-04 15:46:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:46:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 15:46:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 15:46:43] Further information can be found at the LHC@home message board.
[2025-06-04 15:46:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:46:43] Checking for apptainer binary...
[2025-06-04 15:46:43] apptainer is not installed, using version from CVMFS
[2025-06-04 15:46:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:46:44] epyc7v12
[2025-06-04 15:46:44] apptainer works
[2025-06-04 15:46:44] Set ATHENA_PROC_NUMBER=12
[2025-06-04 15:46:44] Set ATHENA_CORE_NUMBER=12
[2025-06-04 15:46:45] Starting ATLAS job with PandaID=6678391488
[2025-06-04 15:46:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:19:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:19:47] 2025-06-04 19:19:22,307 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:19:47] 2025-06-04 19:19:22,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:19:47] 2025-06-04 19:19:22,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:19:47] 2025-06-04 19:19:22,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:19:47] 2025-06-04 19:19:22,316 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:19:47] 2025-06-04 19:19:22,316 | INFO     | sum of square deviations: 2710728847.0291133
[2025-06-04 19:19:47] 2025-06-04 19:19:22,322 | INFO     | sum of deviations: 35053517222.66016
[2025-06-04 19:19:47] 2025-06-04 19:19:22,322 | INFO     | mean x: 1749058397.1553397
[2025-06-04 19:19:47] 2025-06-04 19:19:22,322 | INFO     | mean y: 2600946.354368932
[2025-06-04 19:19:47] 2025-06-04 19:19:22,322 | INFO     | -- intersect: -22615171655.769928
[2025-06-04 19:19:47] 2025-06-04 19:19:22,323 | INFO     | intersect: -22615171655.769928
[2025-06-04 19:19:47] 2025-06-04 19:19:22,323 | INFO     | chi2: 2.3956711375797535
[2025-06-04 19:19:47] 2025-06-04 19:19:22,323 | INFO     | sum of square deviations: 2518093133.6219025
[2025-06-04 19:19:47] 2025-06-04 19:19:22,325 | INFO     | sum of deviations: 47710958687.731346
[2025-06-04 19:19:47] 2025-06-04 19:19:22,325 | INFO     | mean x: 1749058244.6517413
[2025-06-04 19:19:47] 2025-06-04 19:19:22,325 | INFO     | mean y: 2610752.9104477614
[2025-06-04 19:19:47] 2025-06-04 19:19:22,325 | INFO     | -- intersect: -33137245965.965477
[2025-06-04 19:19:47] 2025-06-04 19:19:22,325 | INFO     | intersect: -33137245965.965477
[2025-06-04 19:19:47] 2025-06-04 19:19:22,330 | INFO     | chi2: 1.6873420152237215
[2025-06-04 19:19:47] 2025-06-04 19:19:22,330 | INFO     | current chi2=1.6873420152237215 (change=29.567043290909588 %)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,330 | INFO     | sum of square deviations: 2334818449.4081635
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | sum of deviations: 46314889249.62247
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | mean x: 1749058092.1530612
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | mean y: 2609591.0459183673
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | -- intersect: -34692778330.768295
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | intersect: -34692778330.768295
[2025-06-04 19:19:47] 2025-06-04 19:19:22,332 | INFO     | chi2: 1.6878086659433995
[2025-06-04 19:19:47] 2025-06-04 19:19:22,333 | INFO     | current chi2=1.6878086659433995 (change=-0.027655965149194987 %)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,333 | INFO     | right removable region: 195
[2025-06-04 19:19:47] 2025-06-04 19:19:22,333 | INFO     | sum of square deviations: 2518060802.3283567
[2025-06-04 19:19:47] 2025-06-04 19:19:22,338 | INFO     | sum of deviations: -4878647243.567165
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | mean x: 1749058549.6716418
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | mean y: 2632306.9004975124
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | -- intersect: 3391366869.7446337
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | intersect: 3391366869.7446337
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | chi2: 0.731533172531077
[2025-06-04 19:19:47] 2025-06-04 19:19:22,339 | INFO     | current chi2=0.731533172531077 (change=69.46437426006166 %)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,340 | INFO     | sum of square deviations: 2334741770.015304
[2025-06-04 19:19:47] 2025-06-04 19:19:22,341 | INFO     | sum of deviations: -6263364086.000002
[2025-06-04 19:19:47] 2025-06-04 19:19:22,341 | INFO     | mean x: 1749058702.1887755
[2025-06-04 19:19:47] 2025-06-04 19:19:22,341 | INFO     | mean y: 2633442.0
[2025-06-04 19:19:47] 2025-06-04 19:19:22,341 | INFO     | -- intersect: 4694797517.825457
[2025-06-04 19:19:47] 2025-06-04 19:19:22,341 | INFO     | intersect: 4694797517.825457
[2025-06-04 19:19:47] 2025-06-04 19:19:22,346 | INFO     | chi2: 0.7284622555240224
[2025-06-04 19:19:47] 2025-06-04 19:19:22,346 | INFO     | current chi2=0.7284622555240224 (change=0.41979190040408887 %)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,346 | INFO     | left removable region: 20
[2025-06-04 19:19:47] 2025-06-04 19:19:22,346 | INFO     | sum of square deviations: 1661790740.13715
[2025-06-04 19:19:47] 2025-06-04 19:19:22,347 | INFO     | sum of deviations: 5956042121.108575
[2025-06-04 19:19:47] 2025-06-04 19:19:22,347 | INFO     | mean x: 1749058671.7085714
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | mean y: 2644632.3942857143
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | -- intersect: -6266175423.8100815
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | intersect: -6266175423.8100815
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | chi2: 0.0008539536465329688
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | -- intersect: -6266175423.8100815
[2025-06-04 19:19:47] 2025-06-04 19:19:22,348 | INFO     | current memory leak: 3.58 B/s (using 175 data points, chi2=0.00)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,349 | INFO     | ..............................
[2025-06-04 19:19:47] 2025-06-04 19:19:22,349 | INFO     | . Timing measurements:
[2025-06-04 19:19:47] 2025-06-04 19:19:22,349 | INFO     | . get job = 0 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,353 | INFO     | . initial setup = 3 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,353 | INFO     | . payload setup = 9 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,354 | INFO     | . stage-in = 0 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,354 | INFO     | . payload execution = 12555 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,354 | INFO     | . stage-out = 3 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,354 | INFO     | . log creation = 0 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,354 | INFO     | ..............................
[2025-06-04 19:19:47] 2025-06-04 19:19:22,784 | INFO     | 
[2025-06-04 19:19:47] 2025-06-04 19:19:22,784 | INFO     | job summary report
[2025-06-04 19:19:47] 2025-06-04 19:19:22,784 | INFO     | --------------------------------------------------
[2025-06-04 19:19:47] 2025-06-04 19:19:22,784 | INFO     | PanDA job id: 6678391488
[2025-06-04 19:19:47] 2025-06-04 19:19:22,784 | INFO     | task id: 45006595
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | errors: (none)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | pilot state: finished 
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | transexitcode: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | exeerrorcode: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | exeerrordiag: 
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | exitcode: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | exitmsg: OK
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | cpuconsumptiontime: 40150 s
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | nevents: 400
[2025-06-04 19:19:47] 2025-06-04 19:19:22,785 | INFO     | neventsw: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | pid: 2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | pgrp: 2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | corecount: 12
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | event service: False
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | sizes: {0: 2397188, 1: 2397387, 2: 2397387, 12: 2397415, 16: 2397649, 23: 2397677, 12569: 2427273, 12575: 2436316, 12636: 2436430}
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | --------------------------------------------------
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | 
[2025-06-04 19:19:47] 2025-06-04 19:19:22,786 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/9
[2025-06-04 19:19:47] 2025-06-04 19:19:22,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | job 6678391488 has completed (purged errors)
[2025-06-04 19:19:47] 2025-06-04 19:19:22,948 | INFO     | overall cleanup function is called
[2025-06-04 19:19:47] 2025-06-04 19:19:23,969 | INFO     | --- collectZombieJob: --- 10, [2295491]
[2025-06-04 19:19:47] 2025-06-04 19:19:23,970 | INFO     | zombie collector waiting for pid 2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:23,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:19:47] 2025-06-04 19:19:23,970 | INFO     | collected zombie processes
[2025-06-04 19:19:47] 2025-06-04 19:19:23,970 | INFO     | will attempt to kill all subprocesses of pid=2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:27,680 | INFO     | process IDs to be killed: [2295491] (in reverse order)
[2025-06-04 19:19:47] 2025-06-04 19:19:28,710 | INFO     | PID=2274815 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 19:19:47] 2025-06-04 19:19:28,710 | INFO     | .. there are 37 such processes running
[2025-06-04 19:19:47] 2025-06-04 19:19:32,516 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:19:47] 2025-06-04 19:19:32,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:19:47] 2025-06-04 19:19:32,613 | INFO     | did not find any defunct processes belonging to 2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:32,685 | INFO     | did not find any defunct processes belonging to 2295491
[2025-06-04 19:19:47] 2025-06-04 19:19:32,685 | INFO     | ready for new job
[2025-06-04 19:19:47] 2025-06-04 19:19:32,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:19:47] 2025-06-04 19:19:32,695 | INFO     | **************************************
[2025-06-04 19:19:47] 2025-06-04 19:19:32,695 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:19:47] 2025-06-04 19:19:32,696 | INFO     | **************************************
[2025-06-04 19:19:47] 2025-06-04 19:19:32,696 | INFO     | 
[2025-06-04 19:19:47] 2025-06-04 19:19:32,752 | INFO     | architecture information:
[2025-06-04 19:19:47] 2025-06-04 19:19:32,762 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:19:47] 2025-06-04 19:19:32,842 | INFO     | cat /etc/os-release:
[2025-06-04 19:19:47] NAME="CentOS Linux"
[2025-06-04 19:19:47] VERSION="7 (Core)"
[2025-06-04 19:19:47] ID="centos"
[2025-06-04 19:19:47] ID_LIKE="rhel fedora"
[2025-06-04 19:19:47] VERSION_ID="7"
[2025-06-04 19:19:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:19:47] ANSI_COLOR="0;31"
[2025-06-04 19:19:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:19:47] HOME_URL="https://www.centos.org/"
[2025-06-04 19:19:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:19:47] 
[2025-06-04 19:19:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:19:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:19:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:19:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:19:47] 
[2025-06-04 19:19:47] 2025-06-04 19:19:32,842 | INFO     | **************************************
[2025-06-04 19:19:47] 2025-06-04 19:19:33,345 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/9
[2025-06-04 19:19:47] 2025-06-04 19:19:33,474 | INFO     | sufficient remaining disk space (312775540736 B)
[2025-06-04 19:19:47] 2025-06-04 19:19:33,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:19:47] 2025-06-04 19:19:33,474 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | INFO     | update_server=False
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:19:47] 2025-06-04 19:19:33,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:19:47] 2025-06-04 19:19:33,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:19:47] 2025-06-04 19:19:33,476 | INFO     | aborting loop
[2025-06-04 19:19:47] 2025-06-04 19:19:33,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:19:47] 2025-06-04 19:19:33,981 | INFO     | all data control threads have been joined
[2025-06-04 19:19:47] 2025-06-04 19:19:34,010 | INFO     | all payload control threads have been joined
[2025-06-04 19:19:47] 2025-06-04 19:19:34,478 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:34,478 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:34,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:34,658 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:34,721 | INFO     | all job control threads have been joined
[2025-06-04 19:19:47] 2025-06-04 19:19:34,986 | INFO     | [data] control thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,002 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,014 | INFO     | [payload] control thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,122 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,210 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,490 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,594 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,690 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,726 | INFO     | [job] control thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,802 | INFO     | [job] validate thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:35,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:19:47] 2025-06-04 19:19:36,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:19:47] 2025-06-04 19:19:36,878 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:40,314 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:19:47] 2025-06-04 19:19:40,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843285169984)>', '<ExcThread(monitor, started 139842851694336)>']
[2025-06-04 19:19:47] 2025-06-04 19:19:40,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:19:47] 2025-06-04 19:19:40,514 | INFO     | [monitor] control thread has ended
[2025-06-04 19:19:47] 2025-06-04 19:19:45,389 | INFO     | all workflow threads have been joined
[2025-06-04 19:19:47] 2025-06-04 19:19:45,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:19:47] 2025-06-04 19:19:45,390 | INFO     | traces error code: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:45,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:19:47] 2025-06-04 19:19:46,374 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:19:47] 2025-06-04 19:19:46,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:19:47] 2025-06-04 19:19:46,449 [wrapper] pilotpid: 2274815
[2025-06-04 19:19:47] 2025-06-04 19:19:46,482 [wrapper] Pilot exit status: 0
[2025-06-04 19:19:47] 2025-06-04 19:19:46,622 [wrapper] pandaids: 6678391488
[2025-06-04 19:19:47] 2025-06-04 19:19:47,057 [wrapper] cleanup supervisor_pilot 3617221 2274816
[2025-06-04 19:19:47] 2025-06-04 19:19:47,098 [wrapper] Test setup, not cleaning
[2025-06-04 19:19:47] 2025-06-04 19:19:47,116 [wrapper] apfmon messages muted
[2025-06-04 19:19:47] 2025-06-04 19:19:47,154 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:19:47] 2025-06-04 19:19:47,212 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:19:47]  *** Error codes and diagnostics ***
[2025-06-04 19:19:47]     "exeErrorCode": 0,
[2025-06-04 19:19:47]     "exeErrorDiag": "",
[2025-06-04 19:19:47]     "pilotErrorCode": 0,
[2025-06-04 19:19:47]     "pilotErrorDiag": "",
[2025-06-04 19:19:47]  *** Listing of results directory ***
[2025-06-04 19:19:48] total 389356
[2025-06-04 19:19:48] -rw-r--r-- 1 boinc boinc    495897 Jun  4 07:04 pilot3.tar.gz
[2025-06-04 19:19:48] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:27 queuedata.json
[2025-06-04 19:19:48] -rwx------ 1 boinc boinc     37140 Jun  4 07:28 runpilot2-wrapper.sh
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc       100 Jun  4 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:19:48] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:46 run_atlas
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc       105 Jun  4 15:46 job.xml
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:46 start_atlas.sh
[2025-06-04 19:19:48] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:46 shared
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:46 input.tar.gz
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc      6950 Jun  4 15:46 init_data.xml
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc 216230637 Jun  4 15:46 EVNT.45006593._002195.pool.root.1
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc         0 Jun  4 15:46 boinc_lockfile
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc      2522 Jun  4 15:46 pandaJob.out
[2025-06-04 19:19:48] -rw------- 1 boinc boinc    990989 Jun  4 15:48 agis_schedconf.cvmfs.json
[2025-06-04 19:19:48] drwx------ 4 boinc boinc      4096 Jun  4 15:48 pilot3
[2025-06-04 19:19:48] -rw------- 1 boinc boinc 175807194 Jun  4 19:16 HITS.45006595._054850.pool.root.1
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc       531 Jun  4 19:16 boinc_task_state.xml
[2025-06-04 19:19:48] -rw------- 1 boinc boinc      1035 Jun  4 19:18 memory_monitor_summary.json
[2025-06-04 19:19:48] -rw------- 1 boinc boinc   1598969 Jun  4 19:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:19:48] -rw------- 1 boinc boinc    411002 Jun  4 19:18 log.45006595._054850.job.log.tgz.1
[2025-06-04 19:19:48] -rw------- 1 boinc boinc        95 Jun  4 19:19 pilot_heartbeat.json
[2025-06-04 19:19:48] -rw------- 1 boinc boinc      7647 Jun  4 19:19 heartbeat.json
[2025-06-04 19:19:48] -rw------- 1 boinc boinc      4500 Jun  4 19:19 pilotlog.txt
[2025-06-04 19:19:48] -rw------- 1 boinc boinc   1000910 Jun  4 19:19 log.45006595._054850.job.log.1
[2025-06-04 19:19:48] -rw------- 1 boinc boinc       357 Jun  4 19:19 output.list
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc       620 Jun  4 19:19 runtime_log
[2025-06-04 19:19:48] -rw------- 1 boinc boinc   1433600 Jun  4 19:19 result.tar.gz
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc      8192 Jun  4 19:19 boinc_mmap_file
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc      8964 Jun  4 19:19 runtime_log.err
[2025-06-04 19:19:48] -rw------- 1 boinc boinc       654 Jun  4 19:19 9OiKDmRjxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmecnKDmKPyPym.diag
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc        28 Jun  4 19:19 wrapper_checkpoint.txt
[2025-06-04 19:19:48] -rw-rw-r-- 1 boinc boinc     21176 Jun  4 19:19 stderr.txt
[2025-06-04 19:19:48] HITS file was successfully produced:
[2025-06-04 19:19:48] -rw------- 1 boinc boinc 175807194 Jun  4 19:16 shared/HITS.pool.root.1
[2025-06-04 19:19:48]  *** Contents of shared directory: ***
[2025-06-04 19:19:48] total 384776
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:46 start_atlas.sh
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:46 input.tar.gz
[2025-06-04 19:19:48] -rw-r--r-- 2 boinc boinc 216230637 Jun  4 15:46 ATLAS.root_0
[2025-06-04 19:19:48] -rw------- 1 boinc boinc 175807194 Jun  4 19:16 HITS.pool.root.1
[2025-06-04 19:19:48] -rw------- 1 boinc boinc   1433600 Jun  4 19:19 result.tar.gz
19:19:49 (2267337): run_atlas exited; CPU time 40897.679793
19:19:49 (2267337): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN