Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:06 (25642): wrapper (7.7.26015): starting
09:35:06 (25642): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:35:06] Arguments: --nthreads 8
[2025-06-04 09:35:06] Threads: 8
[2025-06-04 09:35:06] Checking for CVMFS
[2025-06-04 09:35:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:35:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:35:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:35:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:35:06] 2.11.2.0 1598 29070 97964 146781 3 60 14942655 20275200 917 130560 0 29987866 99.993 5011615 6271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:35:06] CVMFS is ok
[2025-06-04 09:35:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:35:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:35:06] Further information can be found at the LHC@home message board.
[2025-06-04 09:35:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:35:06] Checking for apptainer binary...
[2025-06-04 09:35:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:35:06] Running /usr/bin/apptainer --version
[2025-06-04 09:35:06] apptainer version 1.3.2-1.el7
[2025-06-04 09:35:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:35:07] c-205-36.aglt2.org
[2025-06-04 09:35:07] apptainer works
[2025-06-04 09:35:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:35:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:35:07] Starting ATLAS job with PandaID=6678364376
[2025-06-04 09:35:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:33:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:33:27]  guid=d52501a0-b8bd-4b52-b25e-d359d2229cf1
[2025-06-04 10:33:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 10:33:27]  is_altstaged=None
[2025-06-04 10:33:27]  is_tar=False
[2025-06-04 10:33:27]  lfn=log.45006595._053876.job.log.tgz.1
[2025-06-04 10:33:27]  mtime=0
[2025-06-04 10:33:27]  protocol_id=None
[2025-06-04 10:33:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:33:27]  replicas=None
[2025-06-04 10:33:27]  scope=mc23_13p6TeV
[2025-06-04 10:33:27]  status=None
[2025-06-04 10:33:27]  status_code=0
[2025-06-04 10:33:27]  storage_token=
[2025-06-04 10:33:27]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678364376/log.45006595._053876.job.log.tgz.1
[2025-06-04 10:33:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/21/log.45006595._053876.job.log.tgz.1
[2025-06-04 10:33:27]  workdir=None
[2025-06-04 10:33:27] ]
[2025-06-04 10:33:27] 2025-06-04 14:32:57,700 | INFO     | transferring file log.45006595._053876.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678364376/log.45006595._053876.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:33:27] 2025-06-04 14:32:57,700 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678364376/log.45006595._053876.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053876.job
[2025-06-04 10:33:27] 2025-06-04 14:32:57,722 | INFO     | adding to output.list: log.45006595._053876.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/21/log.45006595._053876.job.log.tg
[2025-06-04 10:33:27] 2025-06-04 14:32:57,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:33:27] 2025-06-04 14:32:57,723 | INFO     | summary of transferred files:
[2025-06-04 10:33:27] 2025-06-04 14:32:57,723 | INFO     |  -- lfn=log.45006595._053876.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:33:27] 2025-06-04 14:32:57,724 | INFO     | stage-out finished correctly
[2025-06-04 10:33:27] 2025-06-04 14:32:57,896 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:33:27] 2025-06-04 14:32:59,697 | INFO     | monitor loop #260: job 0:6678364376 is in state 'finished'
[2025-06-04 10:33:27] 2025-06-04 14:32:59,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:27] 2025-06-04 14:33:00,986 | INFO     | job 6678364376 has state=finished
[2025-06-04 10:33:27] 2025-06-04 14:33:00,987 | INFO     | preparing for final server update for job 6678364376 in state='finished'
[2025-06-04 10:33:27] 2025-06-04 14:33:00,987 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:33:27] 2025-06-04 14:33:00,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:33:27] 2025-06-04 14:33:00,987 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:33:27] 2025-06-04 14:33:00,988 | INFO     | job 6678364376 has finished - writing final server update
[2025-06-04 10:33:27] 2025-06-04 14:33:00,988 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:33:27] 2025-06-04 14:33:00,990 | INFO     | executing command: lscpu
[2025-06-04 10:33:27] 2025-06-04 14:33:01,025 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:33:27] 2025-06-04 14:33:02,199 | INFO     | monitor loop #261: job 0:6678364376 is in state 'finished'
[2025-06-04 10:33:27] 2025-06-04 14:33:02,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:27] 2025-06-04 14:33:04,702 | INFO     | monitor loop #262: job 0:6678364376 is in state 'finished'
[2025-06-04 10:33:27] 2025-06-04 14:33:04,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:33:27] 2025-06-04 14:33:06,741 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:33:27] 2025-06-04 14:33:06,742 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678364376/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:33:27] 2025-06-04 14:33:06,743 | INFO     | extracted standard info from prmon json
[2025-06-04 10:33:27] 2025-06-04 14:33:06,743 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:33:27] 2025-06-04 14:33:06,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:33:27] 2025-06-04 14:33:06,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:33:27] 2025-06-04 14:33:06,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:33:27] 2025-06-04 14:33:06,744 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:33:27] 2025-06-04 14:33:06,744 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 10:33:27] 2025-06-04 14:33:06,744 | INFO     | sum of deviations: -1340954612.5
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | mean x: 1749045945.5
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | mean y: 2725858.02
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | -- intersect: 60536898650.19364
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | intersect: 60536898650.19364
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | chi2: 0.008967678440149363
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | -- intersect: 60536898650.19364
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | current memory leak: -34.61 B/s (using 50 data points, chi2=0.01)
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | ..............................
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | . Timing measurements:
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | . get job = 0 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | . initial setup = 2 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,745 | INFO     | . payload setup = 7 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,746 | INFO     | . stage-in = 0 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,746 | INFO     | . payload execution = 3431 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,746 | INFO     | . stage-out = 0 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,746 | INFO     | . log creation = 0 s
[2025-06-04 10:33:27] 2025-06-04 14:33:06,746 | INFO     | ..............................
[2025-06-04 10:33:27] 2025-06-04 14:33:07,282 | INFO     | 
[2025-06-04 10:33:27] 2025-06-04 14:33:07,282 | INFO     | job summary report
[2025-06-04 10:33:27] 2025-06-04 14:33:07,282 | INFO     | --------------------------------------------------
[2025-06-04 10:33:27] 2025-06-04 14:33:07,282 | INFO     | PanDA job id: 6678364376
[2025-06-04 10:33:27] 2025-06-04 14:33:07,282 | INFO     | task id: 45006595
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | errors: (none)
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | pilot state: finished 
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | transexitcode: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | exeerrorcode: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | exeerrordiag: 
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | exitcode: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | exitmsg: OK
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | cpuconsumptiontime: 25483 s
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | nevents: 400
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | neventsw: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | pid: 3743
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | pgrp: 3743
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | corecount: 8
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | event service: False
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | sizes: {0: 2397171, 1: 2397370, 5: 2397576, 11: 2397632, 3442: 2423108, 3444: 2432233, 3453: 2432347}
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | --------------------------------------------------
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | 
[2025-06-04 10:33:27] 2025-06-04 14:33:07,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 10:33:27] 2025-06-04 14:33:07,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | job 6678364376 has completed (purged errors)
[2025-06-04 10:33:27] 2025-06-04 14:33:07,305 | INFO     | overall cleanup function is called
[2025-06-04 10:33:27] 2025-06-04 14:33:08,311 | INFO     | --- collectZombieJob: --- 10, [3743]
[2025-06-04 10:33:27] 2025-06-04 14:33:08,311 | INFO     | zombie collector waiting for pid 3743
[2025-06-04 10:33:27] 2025-06-04 14:33:08,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:33:27] 2025-06-04 14:33:08,312 | INFO     | collected zombie processes
[2025-06-04 10:33:27] 2025-06-04 14:33:08,312 | INFO     | will attempt to kill all subprocesses of pid=3743
[2025-06-04 10:33:27] 2025-06-04 14:33:08,382 | INFO     | process IDs to be killed: [3743] (in reverse order)
[2025-06-04 10:33:27] 2025-06-04 14:33:08,431 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:33:27] 2025-06-04 14:33:08,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:33:27] 2025-06-04 14:33:08,435 | INFO     | did not find any defunct processes belonging to 3743
[2025-06-04 10:33:27] 2025-06-04 14:33:08,438 | INFO     | did not find any defunct processes belonging to 3743
[2025-06-04 10:33:27] 2025-06-04 14:33:08,439 | INFO     | ready for new job
[2025-06-04 10:33:27] 2025-06-04 14:33:08,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:33:27] 2025-06-04 14:33:08,441 | INFO     | **************************************
[2025-06-04 10:33:27] 2025-06-04 14:33:08,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:33:27] 2025-06-04 14:33:08,441 | INFO     | **************************************
[2025-06-04 10:33:27] 2025-06-04 14:33:08,441 | INFO     | 
[2025-06-04 10:33:27] 2025-06-04 14:33:08,442 | INFO     | architecture information:
[2025-06-04 10:33:27] 2025-06-04 14:33:08,443 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:33:27] 2025-06-04 14:33:08,457 | INFO     | cat /etc/os-release:
[2025-06-04 10:33:27] NAME="CentOS Linux"
[2025-06-04 10:33:27] VERSION="7 (Core)"
[2025-06-04 10:33:27] ID="centos"
[2025-06-04 10:33:27] ID_LIKE="rhel fedora"
[2025-06-04 10:33:27] VERSION_ID="7"
[2025-06-04 10:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:33:27] ANSI_COLOR="0;31"
[2025-06-04 10:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:33:27] HOME_URL="https://www.centos.org/"
[2025-06-04 10:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:33:27] 
[2025-06-04 10:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:33:27] 
[2025-06-04 10:33:27] 2025-06-04 14:33:08,457 | INFO     | **************************************
[2025-06-04 10:33:27] 2025-06-04 14:33:08,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 10:33:27] 2025-06-04 14:33:08,978 | INFO     | sufficient remaining disk space (32846643200 B)
[2025-06-04 10:33:27] 2025-06-04 14:33:08,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:33:27] 2025-06-04 14:33:08,978 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:33:27] 2025-06-04 14:33:08,979 | INFO     | update_server=False
[2025-06-04 10:33:27] 2025-06-04 14:33:08,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:33:27] 2025-06-04 14:33:08,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:27] 2025-06-04 14:33:08,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:33:27] 2025-06-04 14:33:08,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:33:27] 2025-06-04 14:33:08,980 | INFO     | aborting loop
[2025-06-04 10:33:27] 2025-06-04 14:33:09,306 | INFO     | all payload control threads have been joined
[2025-06-04 10:33:27] 2025-06-04 14:33:09,713 | INFO     | all job control threads have been joined
[2025-06-04 10:33:27] 2025-06-04 14:33:09,901 | INFO     | all data control threads have been joined
[2025-06-04 10:33:27] 2025-06-04 14:33:09,938 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:33:27] 2025-06-04 14:33:09,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:33:27] 2025-06-04 14:33:09,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:33:27] 2025-06-04 14:33:09,983 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:09,986 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,033 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,095 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,123 | INFO     | [job] validate thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,139 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,211 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,216 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,309 | INFO     | [payload] control thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,641 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,718 | INFO     | [job] control thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,903 | INFO     | [data] control thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:10,986 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:11,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:33:27] 2025-06-04 14:33:12,811 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:12,986 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:19,581 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:33:27] 2025-06-04 14:33:20,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:33:27] 2025-06-04 14:33:21,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124135536448)>', '<ExcThread(monitor, started 140123568072448)>']
[2025-06-04 10:33:27] 2025-06-04 14:33:21,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:33:27] 2025-06-04 14:33:21,992 | INFO     | [monitor] control thread has ended
[2025-06-04 10:33:27] 2025-06-04 14:33:26,860 | INFO     | all workflow threads have been joined
[2025-06-04 10:33:27] 2025-06-04 14:33:26,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:33:27] 2025-06-04 14:33:26,860 | INFO     | traces error code: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:26,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:33:27] 2025-06-04 14:33:26,958 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:33:27] 2025-06-04 14:33:26,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:33:27] 2025-06-04 14:33:26,965 [wrapper] pilotpid: 29568
[2025-06-04 10:33:27] 2025-06-04 14:33:26,968 [wrapper] Pilot exit status: 0
[2025-06-04 10:33:27] 2025-06-04 14:33:26,979 [wrapper] pandaids: 6678364376
[2025-06-04 10:33:27] 2025-06-04 14:33:27,020 [wrapper] cleanup supervisor_pilot 10359 29569
[2025-06-04 10:33:27] 2025-06-04 14:33:27,024 [wrapper] Test setup, not cleaning
[2025-06-04 10:33:27] 2025-06-04 14:33:27,027 [wrapper] apfmon messages muted
[2025-06-04 10:33:27] 2025-06-04 14:33:27,030 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:33:27] 2025-06-04 14:33:27,033 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:33:27]  *** Error codes and diagnostics ***
[2025-06-04 10:33:27]     "exeErrorCode": 0,
[2025-06-04 10:33:27]     "exeErrorDiag": "",
[2025-06-04 10:33:27]     "pilotErrorCode": 0,
[2025-06-04 10:33:27]     "pilotErrorDiag": "",
[2025-06-04 10:33:27]  *** Listing of results directory ***
[2025-06-04 10:33:27] total 387532
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 01:59 pilot3.tar.gz
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 02:18 queuedata.json
[2025-06-04 10:33:27] -rwx------ 1 boincer umatlas     37140 Jun  4 02:19 runpilot2-wrapper.sh
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:33:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:35 run_atlas
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:35 job.xml
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas 217035785 Jun  4 09:35 EVNT.45006593._002156.pool.root.1
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:33:27] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:35 shared
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:35 input.tar.gz
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:35 boinc_lockfile
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:35 pandaJob.out
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas    986819 Jun  4 09:35 agis_schedconf.cvmfs.json
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas   1598969 Jun  4 09:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:33:27] drwx------ 4 boincer umatlas      4096 Jun  4 09:35 pilot3
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas      6050 Jun  4 10:29 init_data.xml
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas 174655789 Jun  4 10:32 HITS.45006595._053876.pool.root.1
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:32 boinc_mmap_file
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas      1046 Jun  4 10:32 memory_monitor_summary.json
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:32 wrapper_checkpoint.txt
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:32 boinc_task_state.xml
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas    299388 Jun  4 10:32 log.45006595._053876.job.log.tgz.1
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas        95 Jun  4 10:32 pilot_heartbeat.json
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas      7737 Jun  4 10:33 heartbeat.json
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas      4425 Jun  4 10:33 pilotlog.txt
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas    353569 Jun  4 10:33 log.45006595._053876.job.log.1
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas       357 Jun  4 10:33 output.list
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:33 runtime_log
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas    675840 Jun  4 10:33 result.tar.gz
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:33 runtime_log.err
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas       657 Jun  4 10:33 f6MLDmrewg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrpaKDm8s43Rm.diag
[2025-06-04 10:33:27] -rw-r--r-- 1 boincer umatlas     21225 Jun  4 10:33 stderr.txt
[2025-06-04 10:33:27] HITS file was successfully produced:
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas 174655789 Jun  4 10:32 shared/HITS.pool.root.1
[2025-06-04 10:33:27]  *** Contents of shared directory: ***
[2025-06-04 10:33:27] total 383696
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas 217035785 Jun  4 09:35 ATLAS.root_0
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:35 start_atlas.sh
[2025-06-04 10:33:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 09:35 input.tar.gz
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas 174655789 Jun  4 10:32 HITS.pool.root.1
[2025-06-04 10:33:27] -rw------- 1 boincer umatlas    675840 Jun  4 10:33 result.tar.gz
10:33:28 (25642): run_atlas exited; CPU time 25479.458879
10:33:28 (25642): called boinc_finish(0)

</stderr_txt>
]]>

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