Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:18 (240055): wrapper (7.7.26015): starting
09:40:18 (240055): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 09:40:18] Arguments: --nthreads 9
[2025-06-04 09:40:18] Threads: 9
[2025-06-04 09:40:18] Checking for CVMFS
[2025-06-04 09:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:40:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:40:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:40:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:40:19] 2.11.2.0 22099 12439 261584 146781 1 194 12330456 18432000 3731 130560 0 52778542 98.960 97835227 37782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:40:19] CVMFS is ok
[2025-06-04 09:40:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:40:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:40:19] Further information can be found at the LHC@home message board.
[2025-06-04 09:40:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:40:19] Checking for apptainer binary...
[2025-06-04 09:40:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:40:19] Running /usr/bin/apptainer --version
[2025-06-04 09:40:19] apptainer version 1.3.2-1.el7
[2025-06-04 09:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:40:19] c-210-33-1.aglt2.org
[2025-06-04 09:40:19] apptainer works
[2025-06-04 09:40:19] Set ATHENA_PROC_NUMBER=9
[2025-06-04 09:40:19] Set ATHENA_CORE_NUMBER=9
[2025-06-04 09:40:19] Starting ATLAS job with PandaID=6667923339
[2025-06-04 09:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:08:23]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:08:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:08:23]  is_altstaged=None
[2025-06-04 11:08:23]  is_tar=False
[2025-06-04 11:08:23]  lfn=log.44871837._077891.job.log.tgz.1
[2025-06-04 11:08:23]  mtime=0
[2025-06-04 11:08:23]  protocol_id=None
[2025-06-04 11:08:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:08:23]  replicas=None
[2025-06-04 11:08:23]  scope=mc23_13p6TeV
[2025-06-04 11:08:23]  status=None
[2025-06-04 11:08:23]  status_code=0
[2025-06-04 11:08:23]  storage_token=
[2025-06-04 11:08:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667923339/log.44871837._077891.job.log.tgz.1
[2025-06-04 11:08:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/f6/log.44871837._077891.job.log.tgz.1
[2025-06-04 11:08:23]  workdir=None
[2025-06-04 11:08:23] ]
[2025-06-04 11:08:23] 2025-06-04 15:07:57,513 | INFO     | transferring file log.44871837._077891.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667923339/log.44871837._077891.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:08:23] 2025-06-04 15:07:57,513 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667923339/log.44871837._077891.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._077891.job
[2025-06-04 11:08:23] 2025-06-04 15:07:57,535 | INFO     | adding to output.list: log.44871837._077891.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/f6/log.44871837._077891.job.log.tg
[2025-06-04 11:08:23] 2025-06-04 15:07:57,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:08:23] 2025-06-04 15:07:57,536 | INFO     | summary of transferred files:
[2025-06-04 11:08:23] 2025-06-04 15:07:57,536 | INFO     |  -- lfn=log.44871837._077891.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:08:23] 2025-06-04 15:07:57,536 | INFO     | stage-out finished correctly
[2025-06-04 11:08:23] 2025-06-04 15:07:59,918 | INFO     | monitor loop #398: job 0:6667923339 is in state 'finished'
[2025-06-04 11:08:23] 2025-06-04 15:07:59,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:08:23] 2025-06-04 15:08:00,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:08:23] 2025-06-04 15:08:01,028 | INFO     | job 6667923339 has state=finished
[2025-06-04 11:08:23] 2025-06-04 15:08:01,028 | INFO     | preparing for final server update for job 6667923339 in state='finished'
[2025-06-04 11:08:23] 2025-06-04 15:08:01,029 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:08:23] 2025-06-04 15:08:01,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:08:23] 2025-06-04 15:08:01,030 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:08:23] 2025-06-04 15:08:01,030 | INFO     | job 6667923339 has finished - writing final server update
[2025-06-04 11:08:23] 2025-06-04 15:08:01,030 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:08:23] 2025-06-04 15:08:01,037 | INFO     | executing command: lscpu
[2025-06-04 11:08:23] 2025-06-04 15:08:01,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:08:23] 2025-06-04 15:08:01,200 | INFO     | PID=243699 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:08:23] 2025-06-04 15:08:01,201 | INFO     | .. there are 10 such processes running
[2025-06-04 11:08:23] 2025-06-04 15:08:02,421 | INFO     | monitor loop #399: job 0:6667923339 is in state 'finished'
[2025-06-04 11:08:23] 2025-06-04 15:08:02,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,114 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:08:23] 2025-06-04 15:08:04,114 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667923339/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,115 | INFO     | extracted standard info from prmon json
[2025-06-04 11:08:23] 2025-06-04 15:08:04,115 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:08:23] 2025-06-04 15:08:04,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:08:23] 2025-06-04 15:08:04,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:08:23] 2025-06-04 15:08:04,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:08:23] 2025-06-04 15:08:04,117 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:08:23] 2025-06-04 15:08:04,118 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,118 | INFO     | sum of deviations: -3350309039.0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,118 | INFO     | mean x: 1749047134.0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,118 | INFO     | mean y: 2602230.7974683545
[2025-06-04 11:08:23] 2025-06-04 15:08:04,118 | INFO     | -- intersect: 38337673701.2383
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | intersect: 38337673701.2383
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | chi2: 0.011188595413182933
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | -- intersect: 38337673701.2383
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | current memory leak: -21.92 B/s (using 79 data points, chi2=0.01)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | ..............................
[2025-06-04 11:08:23] 2025-06-04 15:08:04,119 | INFO     | . Timing measurements:
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . get job = 0 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . initial setup = 2 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . payload setup = 5 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . stage-in = 0 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . payload execution = 5226 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . stage-out = 0 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | . log creation = 0 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,120 | INFO     | ..............................
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | 
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | job summary report
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | --------------------------------------------------
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | PanDA job id: 6667923339
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | task id: 44871837
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | errors: (none)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | pilot state: finished 
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | transexitcode: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | exeerrorcode: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | exeerrordiag: 
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | exitcode: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | exitmsg: OK
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | cpuconsumptiontime: 43306 s
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | nevents: 400
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | neventsw: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | pid: 250143
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | pgrp: 250143
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | corecount: 9
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | event service: False
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | sizes: {0: 2397390, 3: 2397596, 11: 2397624, 5234: 2424121, 5236: 2433062, 5238: 2433118, 5242: 2433416}
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | --------------------------------------------------
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | 
[2025-06-04 11:08:23] 2025-06-04 15:08:04,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:08:23] 2025-06-04 15:08:04,211 | INFO     | job 6667923339 has completed (purged errors)
[2025-06-04 11:08:23] 2025-06-04 15:08:04,211 | INFO     | overall cleanup function is called
[2025-06-04 11:08:23] 2025-06-04 15:08:05,217 | INFO     | --- collectZombieJob: --- 10, [250143]
[2025-06-04 11:08:23] 2025-06-04 15:08:05,218 | INFO     | zombie collector waiting for pid 250143
[2025-06-04 11:08:23] 2025-06-04 15:08:05,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:08:23] 2025-06-04 15:08:05,218 | INFO     | collected zombie processes
[2025-06-04 11:08:23] 2025-06-04 15:08:05,218 | INFO     | will attempt to kill all subprocesses of pid=250143
[2025-06-04 11:08:23] 2025-06-04 15:08:05,380 | INFO     | process IDs to be killed: [250143] (in reverse order)
[2025-06-04 11:08:23] 2025-06-04 15:08:05,458 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:08:23] 2025-06-04 15:08:05,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:08:23] 2025-06-04 15:08:05,465 | INFO     | did not find any defunct processes belonging to 250143
[2025-06-04 11:08:23] 2025-06-04 15:08:05,471 | INFO     | did not find any defunct processes belonging to 250143
[2025-06-04 11:08:23] 2025-06-04 15:08:05,471 | INFO     | ready for new job
[2025-06-04 11:08:23] 2025-06-04 15:08:05,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:08:23] 2025-06-04 15:08:05,473 | INFO     | **************************************
[2025-06-04 11:08:23] 2025-06-04 15:08:05,473 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:08:23] 2025-06-04 15:08:05,473 | INFO     | **************************************
[2025-06-04 11:08:23] 2025-06-04 15:08:05,473 | INFO     | 
[2025-06-04 11:08:23] 2025-06-04 15:08:05,475 | INFO     | architecture information:
[2025-06-04 11:08:23] 2025-06-04 15:08:05,476 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:08:23] 2025-06-04 15:08:05,489 | INFO     | cat /etc/os-release:
[2025-06-04 11:08:23] NAME="CentOS Linux"
[2025-06-04 11:08:23] VERSION="7 (Core)"
[2025-06-04 11:08:23] ID="centos"
[2025-06-04 11:08:23] ID_LIKE="rhel fedora"
[2025-06-04 11:08:23] VERSION_ID="7"
[2025-06-04 11:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:08:23] ANSI_COLOR="0;31"
[2025-06-04 11:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:08:23] HOME_URL="https://www.centos.org/"
[2025-06-04 11:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:08:23] 
[2025-06-04 11:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:08:23] 
[2025-06-04 11:08:23] 2025-06-04 15:08:05,490 | INFO     | **************************************
[2025-06-04 11:08:23] 2025-06-04 15:08:05,993 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:08:23] 2025-06-04 15:08:06,011 | INFO     | sufficient remaining disk space (56141807616 B)
[2025-06-04 11:08:23] 2025-06-04 15:08:06,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:08:23] 2025-06-04 15:08:06,012 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:08:23] 2025-06-04 15:08:06,012 | INFO     | update_server=False
[2025-06-04 11:08:23] 2025-06-04 15:08:06,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:08:23] 2025-06-04 15:08:06,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:08:23] 2025-06-04 15:08:06,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:08:23] 2025-06-04 15:08:06,013 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:08:23] 2025-06-04 15:08:06,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:08:23] 2025-06-04 15:08:06,014 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:08:23] 2025-06-04 15:08:06,014 | INFO     | aborting loop
[2025-06-04 11:08:23] 2025-06-04 15:08:06,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:08:23] 2025-06-04 15:08:06,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:08:23] 2025-06-04 15:08:06,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:08:23] 2025-06-04 15:08:06,593 | INFO     | all payload control threads have been joined
[2025-06-04 11:08:23] 2025-06-04 15:08:06,644 | INFO     | all data control threads have been joined
[2025-06-04 11:08:23] 2025-06-04 15:08:07,015 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,017 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,020 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,151 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,325 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,414 | INFO     | all job control threads have been joined
[2025-06-04 11:08:23] 2025-06-04 15:08:07,599 | INFO     | [payload] control thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,648 | INFO     | [data] control thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,879 | INFO     | [job] validate thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:07,961 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:08,018 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:08,088 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:08,093 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:08,324 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:08,419 | INFO     | [job] control thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:10,376 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:16,116 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:08:23] 2025-06-04 15:08:17,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:08:23] 2025-06-04 15:08:17,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261670721344)>', '<ExcThread(monitor, started 140260881200896)>']
[2025-06-04 11:08:23] 2025-06-04 15:08:18,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:08:23] 2025-06-04 15:08:18,070 | INFO     | [monitor] control thread has ended
[2025-06-04 11:08:23] 2025-06-04 15:08:22,705 | INFO     | all workflow threads have been joined
[2025-06-04 11:08:23] 2025-06-04 15:08:22,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:08:23] 2025-06-04 15:08:22,706 | INFO     | traces error code: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:22,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:08:23] 2025-06-04 15:08:22,827 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:08:23] 2025-06-04 15:08:22,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:08:23] 2025-06-04 15:08:22,835 [wrapper] pilotpid: 243699
[2025-06-04 11:08:23] 2025-06-04 15:08:22,838 [wrapper] Pilot exit status: 0
[2025-06-04 11:08:23] 2025-06-04 15:08:22,850 [wrapper] pandaids: 6667923339
[2025-06-04 11:08:23] 2025-06-04 15:08:22,913 [wrapper] cleanup supervisor_pilot  48912 243700
[2025-06-04 11:08:23] 2025-06-04 15:08:22,916 [wrapper] Test setup, not cleaning
[2025-06-04 11:08:23] 2025-06-04 15:08:22,918 [wrapper] apfmon messages muted
[2025-06-04 11:08:23] 2025-06-04 15:08:22,922 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:08:23] 2025-06-04 15:08:22,924 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:08:23]  *** Error codes and diagnostics ***
[2025-06-04 11:08:23]     "exeErrorCode": 0,
[2025-06-04 11:08:23]     "exeErrorDiag": "",
[2025-06-04 11:08:23]     "pilotErrorCode": 0,
[2025-06-04 11:08:23]     "pilotErrorDiag": "",
[2025-06-04 11:08:23]  *** Listing of results directory ***
[2025-06-04 11:08:23] total 419636
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:05 queuedata.json
[2025-06-04 11:08:23] -rwx------ 1 boincer umatlas     37140 May 27 23:05 runpilot2-wrapper.sh
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:08:23] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:40 run_atlas
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:40 job.xml
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:40 start_atlas.sh
[2025-06-04 11:08:23] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:40 shared
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 09:40 input.tar.gz
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas 226035173 Jun  4 09:40 EVNT.44871834._003045.pool.root.1
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:40 boinc_lockfile
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 09:40 pandaJob.out
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas    986819 Jun  4 09:40 agis_schedconf.cvmfs.json
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas   1598969 Jun  4 09:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:08:23] drwx------ 4 boincer umatlas      4096 Jun  4 09:40 pilot3
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 11:03 init_data.xml
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas        95 Jun  4 11:07 pilot_heartbeat.json
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas 198182440 Jun  4 11:07 HITS.44871837._077891.pool.root.1
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:07 boinc_task_state.xml
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas      1042 Jun  4 11:07 memory_monitor_summary.json
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas    312326 Jun  4 11:07 log.44871837._077891.job.log.tgz.1
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas      7735 Jun  4 11:08 heartbeat.json
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:08 wrapper_checkpoint.txt
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:08 boinc_mmap_file
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas      4548 Jun  4 11:08 pilotlog.txt
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas    514967 Jun  4 11:08 log.44871837._077891.job.log.1
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas       357 Jun  4 11:08 output.list
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:08 runtime_log
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas    849920 Jun  4 11:08 result.tar.gz
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas       658 Jun  4 11:08 xiLODmsHMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS8aKDmDwsMum.diag
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 11:08 runtime_log.err
[2025-06-04 11:08:23] -rw-r--r-- 1 boincer umatlas     21407 Jun  4 11:08 stderr.txt
[2025-06-04 11:08:23] HITS file was successfully produced:
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas 198182440 Jun  4 11:07 shared/HITS.pool.root.1
[2025-06-04 11:08:23]  *** Contents of shared directory: ***
[2025-06-04 11:08:23] total 415632
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:40 start_atlas.sh
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 09:40 input.tar.gz
[2025-06-04 11:08:23] -rw-r--r-- 2 boincer umatlas 226035173 Jun  4 09:40 ATLAS.root_0
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas 198182440 Jun  4 11:07 HITS.pool.root.1
[2025-06-04 11:08:23] -rw------- 1 boincer umatlas    849920 Jun  4 11:08 result.tar.gz
11:08:24 (240055): run_atlas exited; CPU time 43349.314634
11:08:24 (240055): called boinc_finish(0)

</stderr_txt>
]]>

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