Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:22 (205679): wrapper (7.7.26015): starting
09:49:22 (205679): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:49:22] Arguments: --nthreads 8
[2025-06-04 09:49:22] Threads: 8
[2025-06-04 09:49:22] Checking for CVMFS
[2025-06-04 09:49:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:49:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:49:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:49:22] 2.12.6.0 3451353 23325 455744 146781 1 197 20876994 32935937 11116 16776704 0 135095368 99.721 101389993 26197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 09:49:22] CVMFS is ok
[2025-06-04 09:49:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:49:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:49:22] Further information can be found at the LHC@home message board.
[2025-06-04 09:49:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:49:22] Checking for apptainer binary...
[2025-06-04 09:49:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:49:22] Running /usr/bin/apptainer --version
[2025-06-04 09:49:22] apptainer version 1.4.1-1.el9
[2025-06-04 09:49:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:49:22] c6-12-27-2.aglt2.org
[2025-06-04 09:49:22] apptainer works
[2025-06-04 09:49:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:49:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:49:22] Starting ATLAS job with PandaID=6679476714
[2025-06-04 09:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:51:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:51:53]  is_altstaged=None
[2025-06-04 10:51:53]  is_tar=False
[2025-06-04 10:51:53]  lfn=log.45006595._056370.job.log.tgz.1
[2025-06-04 10:51:53]  mtime=0
[2025-06-04 10:51:53]  protocol_id=None
[2025-06-04 10:51:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:51:53]  replicas=None
[2025-06-04 10:51:53]  scope=mc23_13p6TeV
[2025-06-04 10:51:53]  status=None
[2025-06-04 10:51:53]  status_code=0
[2025-06-04 10:51:53]  storage_token=
[2025-06-04 10:51:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679476714/log.45006595._056370.job.log.tgz.1
[2025-06-04 10:51:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/c4/log.45006595._056370.job.log.tgz.1
[2025-06-04 10:51:53]  workdir=None
[2025-06-04 10:51:53] ]
[2025-06-04 10:51:53] 2025-06-04 14:51:25,112 | INFO     | transferring file log.45006595._056370.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679476714/log.45006595._056370.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:51:53] 2025-06-04 14:51:25,112 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679476714/log.45006595._056370.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056370.job
[2025-06-04 10:51:53] 2025-06-04 14:51:25,131 | INFO     | adding to output.list: log.45006595._056370.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/c4/log.45006595._056370.job.log.tg
[2025-06-04 10:51:53] 2025-06-04 14:51:25,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:51:53] 2025-06-04 14:51:25,133 | INFO     | summary of transferred files:
[2025-06-04 10:51:53] 2025-06-04 14:51:25,133 | INFO     |  -- lfn=log.45006595._056370.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:51:53] 2025-06-04 14:51:25,133 | INFO     | stage-out finished correctly
[2025-06-04 10:51:53] 2025-06-04 14:51:26,699 | WARNING  | process 215964 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:51:53] 2025-06-04 14:51:26,699 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679476714/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:51:53] 2025-06-04 14:51:27,023 | INFO     | number of running child processes to parent process 215964: 1
[2025-06-04 10:51:53] 2025-06-04 14:51:27,024 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:51:53] 2025-06-04 14:51:27,858 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:51:53] 2025-06-04 14:51:29,527 | INFO     | monitor loop #276: job 0:6679476714 is in state 'finished'
[2025-06-04 10:51:53] 2025-06-04 14:51:29,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:51:53] 2025-06-04 14:51:30,311 | INFO     | job 6679476714 has state=finished
[2025-06-04 10:51:53] 2025-06-04 14:51:30,312 | INFO     | preparing for final server update for job 6679476714 in state='finished'
[2025-06-04 10:51:53] 2025-06-04 14:51:30,312 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:51:53] 2025-06-04 14:51:30,312 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:51:53] 2025-06-04 14:51:30,313 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:51:53] 2025-06-04 14:51:30,313 | INFO     | job 6679476714 has finished - writing final server update
[2025-06-04 10:51:53] 2025-06-04 14:51:30,313 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:51:53] 2025-06-04 14:51:30,330 | INFO     | executing command: lscpu
[2025-06-04 10:51:53] 2025-06-04 14:51:30,420 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:51:53] 2025-06-04 14:51:32,030 | INFO     | monitor loop #277: job 0:6679476714 is in state 'finished'
[2025-06-04 10:51:53] 2025-06-04 14:51:32,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,456 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 10:51:53] 2025-06-04 14:51:33,456 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679476714/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,457 | INFO     | extracted standard info from prmon json
[2025-06-04 10:51:53] 2025-06-04 14:51:33,457 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:51:53] 2025-06-04 14:51:33,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:51:53] 2025-06-04 14:51:33,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:51:53] 2025-06-04 14:51:33,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:51:53] 2025-06-04 14:51:33,460 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:51:53] 2025-06-04 14:51:33,460 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | sum of deviations: 6348276618.499999
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | mean x: 1749046916.5
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | mean y: 2235194.314814815
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | -- intersect: -227479513779.17563
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | intersect: -227479513779.17563
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | chi2: 1.072321457370148
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | -- intersect: -227479513779.17563
[2025-06-04 10:51:53] 2025-06-04 14:51:33,461 | INFO     | current memory leak: 130.06 B/s (using 54 data points, chi2=1.07)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | ..............................
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . Timing measurements:
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . get job = 0 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . initial setup = 2 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . payload setup = 5 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . stage-in = 0 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . payload execution = 3689 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . stage-out = 0 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | . log creation = 0 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,462 | INFO     | ..............................
[2025-06-04 10:51:53] 2025-06-04 14:51:33,561 | INFO     | 
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | job summary report
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | --------------------------------------------------
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | PanDA job id: 6679476714
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | task id: 45006595
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | errors: (none)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | pilot state: finished 
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | transexitcode: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | exeerrorcode: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | exeerrordiag: 
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | exitcode: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | exitmsg: OK
[2025-06-04 10:51:53] 2025-06-04 14:51:33,562 | INFO     | cpuconsumptiontime: 23709 s
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | nevents: 400
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | neventsw: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | pid: 215964
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | pgrp: 215964
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | corecount: 8
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | event service: False
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | sizes: {0: 2397121, 1: 2397320, 4: 2397526, 11: 2397554, 3698: 2423238, 3699: 2432179, 3702: 2432363, 3708: 2432533}
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | --------------------------------------------------
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | 
[2025-06-04 10:51:53] 2025-06-04 14:51:33,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 10:51:53] 2025-06-04 14:51:33,581 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:51:53] 2025-06-04 14:51:33,583 | INFO     | job 6679476714 has completed (purged errors)
[2025-06-04 10:51:53] 2025-06-04 14:51:33,583 | INFO     | overall cleanup function is called
[2025-06-04 10:51:53] 2025-06-04 14:51:34,590 | INFO     | --- collectZombieJob: --- 10, [215964]
[2025-06-04 10:51:53] 2025-06-04 14:51:34,590 | INFO     | zombie collector waiting for pid 215964
[2025-06-04 10:51:53] 2025-06-04 14:51:34,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:51:53] 2025-06-04 14:51:34,591 | INFO     | collected zombie processes
[2025-06-04 10:51:53] 2025-06-04 14:51:34,591 | INFO     | will attempt to kill all subprocesses of pid=215964
[2025-06-04 10:51:53] 2025-06-04 14:51:34,885 | INFO     | process IDs to be killed: [215964] (in reverse order)
[2025-06-04 10:51:53] 2025-06-04 14:51:34,996 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:51:53] 2025-06-04 14:51:34,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:51:53] 2025-06-04 14:51:35,009 | INFO     | did not find any defunct processes belonging to 215964
[2025-06-04 10:51:53] 2025-06-04 14:51:35,023 | INFO     | did not find any defunct processes belonging to 215964
[2025-06-04 10:51:53] 2025-06-04 14:51:35,023 | INFO     | ready for new job
[2025-06-04 10:51:53] 2025-06-04 14:51:35,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:51:53] 2025-06-04 14:51:35,025 | INFO     | **************************************
[2025-06-04 10:51:53] 2025-06-04 14:51:35,025 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:51:53] 2025-06-04 14:51:35,025 | INFO     | **************************************
[2025-06-04 10:51:53] 2025-06-04 14:51:35,025 | INFO     | 
[2025-06-04 10:51:53] 2025-06-04 14:51:35,042 | INFO     | architecture information:
[2025-06-04 10:51:53] 2025-06-04 14:51:35,043 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:51:53] 2025-06-04 14:51:35,060 | INFO     | cat /etc/os-release:
[2025-06-04 10:51:53] NAME="CentOS Linux"
[2025-06-04 10:51:53] VERSION="7 (Core)"
[2025-06-04 10:51:53] ID="centos"
[2025-06-04 10:51:53] ID_LIKE="rhel fedora"
[2025-06-04 10:51:53] VERSION_ID="7"
[2025-06-04 10:51:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:51:53] ANSI_COLOR="0;31"
[2025-06-04 10:51:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:51:53] HOME_URL="https://www.centos.org/"
[2025-06-04 10:51:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:51:53] 
[2025-06-04 10:51:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:51:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:51:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:51:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:51:53] 
[2025-06-04 10:51:53] 2025-06-04 14:51:35,060 | INFO     | **************************************
[2025-06-04 10:51:53] 2025-06-04 14:51:35,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 10:51:53] 2025-06-04 14:51:35,580 | INFO     | sufficient remaining disk space (95606013952 B)
[2025-06-04 10:51:53] 2025-06-04 14:51:35,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:51:53] 2025-06-04 14:51:35,581 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:51:53] 2025-06-04 14:51:35,581 | INFO     | update_server=False
[2025-06-04 10:51:53] 2025-06-04 14:51:35,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:51:53] 2025-06-04 14:51:35,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:51:53] 2025-06-04 14:51:35,581 | INFO     | aborting loop
[2025-06-04 10:51:53] 2025-06-04 14:51:35,627 | INFO     | all payload control threads have been joined
[2025-06-04 10:51:53] 2025-06-04 14:51:35,648 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:51:53] 2025-06-04 14:51:35,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:51:53] 2025-06-04 14:51:35,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:51:53] 2025-06-04 14:51:35,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:51:53] 2025-06-04 14:51:36,482 | INFO     | all job control threads have been joined
[2025-06-04 10:51:53] 2025-06-04 14:51:36,586 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:36,586 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:36,630 | INFO     | [payload] control thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:36,683 | INFO     | all data control threads have been joined
[2025-06-04 10:51:53] 2025-06-04 14:51:36,895 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:36,950 | INFO     | [job] validate thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,172 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,230 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,449 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,487 | INFO     | [job] control thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,688 | INFO     | [data] control thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,764 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:37,774 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:38,072 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:38,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:51:53] 2025-06-04 14:51:38,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:51:53] 2025-06-04 14:51:39,579 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:42,459 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:46,414 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:51:53] 2025-06-04 14:51:47,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:51:53] 2025-06-04 14:51:48,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465295337280)>', '<ExcThread(monitor, started 140464799860480)>']
[2025-06-04 10:51:53] 2025-06-04 14:51:48,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:51:53] 2025-06-04 14:51:48,702 | INFO     | [monitor] control thread has ended
[2025-06-04 10:51:53] 2025-06-04 14:51:53,066 | INFO     | all workflow threads have been joined
[2025-06-04 10:51:53] 2025-06-04 14:51:53,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:51:53] 2025-06-04 14:51:53,067 | INFO     | traces error code: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:53,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:51:53] 2025-06-04 14:51:53,269 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:51:53] 2025-06-04 14:51:53,271 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:51:53] 2025-06-04 14:51:53,273 [wrapper] pilotpid: 209491
[2025-06-04 10:51:53] 2025-06-04 14:51:53,275 [wrapper] Pilot exit status: 0
[2025-06-04 10:51:53] 2025-06-04 14:51:53,282 [wrapper] pandaids: 6679476714
[2025-06-04 10:51:53] 2025-06-04 14:51:53,345 [wrapper] cleanup supervisor_pilot  395691 209492
[2025-06-04 10:51:53] 2025-06-04 14:51:53,347 [wrapper] Test setup, not cleaning
[2025-06-04 10:51:53] 2025-06-04 14:51:53,349 [wrapper] apfmon messages muted
[2025-06-04 10:51:53] 2025-06-04 14:51:53,351 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:51:53] 2025-06-04 14:51:53,353 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:51:53]  *** Error codes and diagnostics ***
[2025-06-04 10:51:53]     "exeErrorCode": 0,
[2025-06-04 10:51:53]     "exeErrorDiag": "",
[2025-06-04 10:51:53]     "pilotErrorCode": 0,
[2025-06-04 10:51:53]     "pilotErrorDiag": "",
[2025-06-04 10:51:53]  *** Listing of results directory ***
[2025-06-04 10:51:53] total 388436
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 10:51:53] -rwx------. 1 boincer umatlas     37140 Jun  4 05:08 runpilot2-wrapper.sh
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:08 queuedata.json
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas       100 Jun  4 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:51:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 09:49 run_atlas
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas       105 Jun  4 09:49 job.xml
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas 214207953 Jun  4 09:49 EVNT.45006593._001599.pool.root.1
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:49 start_atlas.sh
[2025-06-04 10:51:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 09:49 shared
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 09:49 input.tar.gz
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas         0 Jun  4 09:49 boinc_lockfile
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 09:49 pandaJob.out
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas    986819 Jun  4 09:49 agis_schedconf.cvmfs.json
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas   1598969 Jun  4 09:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:51:53] drwx------. 4 boincer umatlas      4096 Jun  4 09:49 pilot3
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas      6860 Jun  4 10:46 init_data.xml
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas        95 Jun  4 10:50 pilot_heartbeat.json
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas 178347752 Jun  4 10:50 HITS.45006595._056370.pool.root.1
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas       530 Jun  4 10:50 boinc_task_state.xml
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas      1035 Jun  4 10:51 memory_monitor_summary.json
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas    308537 Jun  4 10:51 log.45006595._056370.job.log.tgz.1
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas      7718 Jun  4 10:51 heartbeat.json
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas        27 Jun  4 10:51 wrapper_checkpoint.txt
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 10:51 boinc_mmap_file
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas      4425 Jun  4 10:51 pilotlog.txt
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas    376229 Jun  4 10:51 log.45006595._056370.job.log.1
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas       357 Jun  4 10:51 output.list
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas       620 Jun  4 10:51 runtime_log
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas    706560 Jun  4 10:51 result.tar.gz
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 10:51 runtime_log.err
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas       652 Jun  4 10:51 QgXNDm4Hzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmi1aKDm7PpGHn.diag
[2025-06-04 10:51:53] -rw-r--r--. 1 boincer umatlas     21411 Jun  4 10:51 stderr.txt
[2025-06-04 10:51:53] HITS file was successfully produced:
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas 178347752 Jun  4 10:50 shared/HITS.pool.root.1
[2025-06-04 10:51:53]  *** Contents of shared directory: ***
[2025-06-04 10:51:53] total 384572
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas 214207953 Jun  4 09:49 ATLAS.root_0
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 09:49 start_atlas.sh
[2025-06-04 10:51:53] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 09:49 input.tar.gz
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas 178347752 Jun  4 10:50 HITS.pool.root.1
[2025-06-04 10:51:53] -rw-------. 1 boincer umatlas    706560 Jun  4 10:51 result.tar.gz
10:51:55 (205679): run_atlas exited; CPU time 23845.839164
10:51:55 (205679): called boinc_finish(0)

</stderr_txt>
]]>

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