Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:50 (91923): wrapper (7.7.26015): starting
09:34:50 (91923): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:34:50] Arguments: --nthreads 8
[2025-06-04 09:34:50] Threads: 8
[2025-06-04 09:34:50] Checking for CVMFS
[2025-06-04 09:34:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:34:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:34:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:34:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:34:50] 2.11.2.0 74184 12761 358752 146781 1 457 18414738 18432000 12775 130560 0 76175858 99.625 56693068 42707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 09:34:50] CVMFS is ok
[2025-06-04 09:34:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:34:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:34:50] Further information can be found at the LHC@home message board.
[2025-06-04 09:34:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:34:50] Checking for apptainer binary...
[2025-06-04 09:34:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:34:50] Running /usr/bin/apptainer --version
[2025-06-04 09:34:50] apptainer version 1.3.2-1.el7
[2025-06-04 09:34:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:34:51] c-212-13.aglt2.org
[2025-06-04 09:34:51] apptainer works
[2025-06-04 09:34:51] Set ATHENA_PROC_NUMBER=8
[2025-06-04 09:34:51] Set ATHENA_CORE_NUMBER=8
[2025-06-04 09:34:51] Starting ATLAS job with PandaID=6678391484
[2025-06-04 09:34:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:50:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:50:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 10:50:06]  replicas=None
[2025-06-04 10:50:06]  scope=mc23_13p6TeV
[2025-06-04 10:50:06]  status=None
[2025-06-04 10:50:06]  status_code=0
[2025-06-04 10:50:06]  storage_token=
[2025-06-04 10:50:06]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678391484/log.45006595._054846.job.log.tgz.1
[2025-06-04 10:50:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/0e/log.45006595._054846.job.log.tgz.1
[2025-06-04 10:50:06]  workdir=None
[2025-06-04 10:50:06] ]
[2025-06-04 10:50:06] 2025-06-04 14:49:39,775 | INFO     | transferring file log.45006595._054846.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678391484/log.45006595._054846.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 10:50:06] 2025-06-04 14:49:39,775 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678391484/log.45006595._054846.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._054846.job
[2025-06-04 10:50:06] 2025-06-04 14:49:39,961 | INFO     | adding to output.list: log.45006595._054846.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/0e/log.45006595._054846.job.log.tg
[2025-06-04 10:50:06] 2025-06-04 14:49:39,962 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:50:06] 2025-06-04 14:49:39,962 | INFO     | summary of transferred files:
[2025-06-04 10:50:06] 2025-06-04 14:49:39,962 | INFO     |  -- lfn=log.45006595._054846.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:50:06] 2025-06-04 14:49:39,962 | INFO     | stage-out finished correctly
[2025-06-04 10:50:06] 2025-06-04 14:49:41,422 | INFO     | PID=95531 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:50:06] 2025-06-04 14:49:41,422 | INFO     | .. there are 18 such processes running
[2025-06-04 10:50:06] 2025-06-04 14:49:42,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:50:06] 2025-06-04 14:49:44,079 | WARNING  | process 6574 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:50:06] 2025-06-04 14:49:44,079 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391484/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:50:06] 2025-06-04 14:49:44,343 | INFO     | number of running child processes to parent process 6574: 1
[2025-06-04 10:50:06] 2025-06-04 14:49:44,344 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:50:06] 2025-06-04 14:49:45,551 | INFO     | job 6678391484 has state=finished
[2025-06-04 10:50:06] 2025-06-04 14:49:45,552 | INFO     | preparing for final server update for job 6678391484 in state='finished'
[2025-06-04 10:50:06] 2025-06-04 14:49:45,552 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:50:06] 2025-06-04 14:49:45,552 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:50:06] 2025-06-04 14:49:45,552 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:50:06] 2025-06-04 14:49:45,552 | INFO     | job 6678391484 has finished - writing final server update
[2025-06-04 10:50:06] 2025-06-04 14:49:45,553 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:50:06] 2025-06-04 14:49:45,556 | INFO     | executing command: lscpu
[2025-06-04 10:50:06] 2025-06-04 14:49:45,750 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:50:06] 2025-06-04 14:49:46,848 | INFO     | monitor loop #335: job 0:6678391484 is in state 'finished'
[2025-06-04 10:50:06] 2025-06-04 14:49:46,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:50:06] 2025-06-04 14:49:49,352 | INFO     | monitor loop #336: job 0:6678391484 is in state 'finished'
[2025-06-04 10:50:06] 2025-06-04 14:49:49,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,301 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:50:06] 2025-06-04 14:49:51,301 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678391484/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,302 | INFO     | extracted standard info from prmon json
[2025-06-04 10:50:06] 2025-06-04 14:49:51,302 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:50:06] 2025-06-04 14:49:51,302 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:50:06] 2025-06-04 14:49:51,302 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:50:06] 2025-06-04 14:49:51,302 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:50:06] 2025-06-04 14:49:51,304 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:50:06] 2025-06-04 14:49:51,304 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 10:50:06] 2025-06-04 14:49:51,304 | INFO     | sum of deviations: -1170045666.5
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | mean x: 1749046419.5
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | mean y: 2533582.257575758
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | -- intersect: 22963683244.5712
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | intersect: 22963683244.5712
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | chi2: 0.0031388285077586994
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | -- intersect: 22963683244.5712
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | current memory leak: -13.13 B/s (using 66 data points, chi2=0.00)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,305 | INFO     | ..............................
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . Timing measurements:
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . get job = 0 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . initial setup = 2 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . payload setup = 8 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . stage-in = 0 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . payload execution = 4447 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . stage-out = 1 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | . log creation = 0 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,306 | INFO     | ..............................
[2025-06-04 10:50:06] 2025-06-04 14:49:51,382 | INFO     | 
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | job summary report
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | --------------------------------------------------
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | PanDA job id: 6678391484
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | task id: 45006595
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | errors: (none)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | pilot state: finished 
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | transexitcode: 0
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | exeerrorcode: 0
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | exeerrordiag: 
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | exitcode: 0
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | exitmsg: OK
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | cpuconsumptiontime: 30710 s
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | nevents: 400
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | neventsw: 0
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | pid: 6574
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | pgrp: 6574
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | corecount: 8
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | event service: False
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | sizes: {0: 2397115, 1: 2397370, 5: 2397576, 11: 2397632, 4460: 2423725, 4461: 2423724, 4462: 2432849, 4465: 2432905, 4473: 2433075}
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | --------------------------------------------------
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | 
[2025-06-04 10:50:06] 2025-06-04 14:49:51,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 10:50:06] 2025-06-04 14:49:51,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | job 6678391484 has completed (purged errors)
[2025-06-04 10:50:06] 2025-06-04 14:49:51,600 | INFO     | overall cleanup function is called
[2025-06-04 10:50:06] 2025-06-04 14:49:52,609 | INFO     | --- collectZombieJob: --- 10, [6574]
[2025-06-04 10:50:06] 2025-06-04 14:49:52,609 | INFO     | zombie collector waiting for pid 6574
[2025-06-04 10:50:06] 2025-06-04 14:49:52,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:50:06] 2025-06-04 14:49:52,610 | INFO     | collected zombie processes
[2025-06-04 10:50:06] 2025-06-04 14:49:52,610 | INFO     | will attempt to kill all subprocesses of pid=6574
[2025-06-04 10:50:06] 2025-06-04 14:49:52,861 | INFO     | process IDs to be killed: [6574] (in reverse order)
[2025-06-04 10:50:06] 2025-06-04 14:49:53,324 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:50:06] 2025-06-04 14:49:53,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:50:06] 2025-06-04 14:49:53,334 | INFO     | did not find any defunct processes belonging to 6574
[2025-06-04 10:50:06] 2025-06-04 14:49:53,340 | INFO     | did not find any defunct processes belonging to 6574
[2025-06-04 10:50:06] 2025-06-04 14:49:53,340 | INFO     | ready for new job
[2025-06-04 10:50:06] 2025-06-04 14:49:53,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:50:06] 2025-06-04 14:49:53,342 | INFO     | **************************************
[2025-06-04 10:50:06] 2025-06-04 14:49:53,342 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:50:06] 2025-06-04 14:49:53,342 | INFO     | **************************************
[2025-06-04 10:50:06] 2025-06-04 14:49:53,342 | INFO     | 
[2025-06-04 10:50:06] 2025-06-04 14:49:53,345 | INFO     | architecture information:
[2025-06-04 10:50:06] 2025-06-04 14:49:53,346 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:50:06] 2025-06-04 14:49:53,424 | INFO     | cat /etc/os-release:
[2025-06-04 10:50:06] NAME="CentOS Linux"
[2025-06-04 10:50:06] VERSION="7 (Core)"
[2025-06-04 10:50:06] ID="centos"
[2025-06-04 10:50:06] ID_LIKE="rhel fedora"
[2025-06-04 10:50:06] VERSION_ID="7"
[2025-06-04 10:50:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:50:06] ANSI_COLOR="0;31"
[2025-06-04 10:50:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:50:06] HOME_URL="https://www.centos.org/"
[2025-06-04 10:50:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:50:06] 
[2025-06-04 10:50:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:50:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:50:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:50:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:50:06] 
[2025-06-04 10:50:06] 2025-06-04 14:49:53,424 | INFO     | **************************************
[2025-06-04 10:50:06] 2025-06-04 14:49:53,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 10:50:06] 2025-06-04 14:49:54,066 | INFO     | sufficient remaining disk space (104014544896 B)
[2025-06-04 10:50:06] 2025-06-04 14:49:54,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:50:06] 2025-06-04 14:49:54,066 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:50:06] 2025-06-04 14:49:54,066 | INFO     | update_server=False
[2025-06-04 10:50:06] 2025-06-04 14:49:54,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:50:06] 2025-06-04 14:49:54,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:50:06] 2025-06-04 14:49:54,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:50:06] 2025-06-04 14:49:54,069 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:50:06] 2025-06-04 14:49:54,070 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:50:06] 2025-06-04 14:49:54,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:50:06] 2025-06-04 14:49:54,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:50:06] 2025-06-04 14:49:54,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:50:06] 2025-06-04 14:49:54,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:50:06] 2025-06-04 14:49:54,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:50:06] 2025-06-04 14:49:54,373 | INFO     | will abort loop
[2025-06-04 10:50:06] 2025-06-04 14:49:54,876 | INFO     | all data control threads have been joined
[2025-06-04 10:50:06] 2025-06-04 14:49:55,072 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:55,286 | INFO     | all payload control threads have been joined
[2025-06-04 10:50:06] 2025-06-04 14:49:55,378 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:55,462 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:55,482 | INFO     | all job control threads have been joined
[2025-06-04 10:50:06] 2025-06-04 14:49:55,803 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:55,882 | INFO     | [data] control thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:55,897 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,050 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,074 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,161 | INFO     | [job] validate thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,221 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,292 | INFO     | [payload] control thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:50:06] 2025-06-04 14:49:56,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,488 | INFO     | [job] control thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:56,508 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:57,404 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:58,074 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:50:06] 2025-06-04 14:49:59,565 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-06-04 10:50:06] 2025-06-04 14:49:59,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429832111936)>', '<ExcThread(monitor, started 140429605222144)>']
[2025-06-04 10:50:06] 2025-06-04 14:50:00,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:50:06] 2025-06-04 14:50:00,102 | INFO     | [monitor] control thread has ended
[2025-06-04 10:50:06] 2025-06-04 14:50:04,987 | INFO     | all workflow threads have been joined
[2025-06-04 10:50:06] 2025-06-04 14:50:04,987 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:50:06] 2025-06-04 14:50:04,988 | INFO     | traces error code: 0
[2025-06-04 10:50:06] 2025-06-04 14:50:04,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:50:06] 2025-06-04 14:50:05,174 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:50:06] 2025-06-04 14:50:05,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:50:06] 2025-06-04 14:50:05,252 [wrapper] pilotpid: 95531
[2025-06-04 10:50:06] 2025-06-04 14:50:05,288 [wrapper] Pilot exit status: 0
[2025-06-04 10:50:06] 2025-06-04 14:50:05,463 [wrapper] pandaids: 6678391484
[2025-06-04 10:50:06] 2025-06-04 14:50:05,840 [wrapper] cleanup supervisor_pilot 65868 95532
[2025-06-04 10:50:06] 2025-06-04 14:50:05,858 [wrapper] Test setup, not cleaning
[2025-06-04 10:50:06] 2025-06-04 14:50:05,861 [wrapper] apfmon messages muted
[2025-06-04 10:50:06] 2025-06-04 14:50:05,889 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:50:06] 2025-06-04 14:50:05,922 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:50:06]  *** Error codes and diagnostics ***
[2025-06-04 10:50:06]     "exeErrorCode": 0,
[2025-06-04 10:50:06]     "exeErrorDiag": "",
[2025-06-04 10:50:06]     "pilotErrorCode": 0,
[2025-06-04 10:50:06]     "pilotErrorDiag": "",
[2025-06-04 10:50:06]  *** Listing of results directory ***
[2025-06-04 10:50:06] total 397380
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:27 queuedata.json
[2025-06-04 10:50:06] -rwx------ 1 boincer umatlas     37140 Jun  4 03:28 runpilot2-wrapper.sh
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas       100 Jun  4 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:50:06] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 09:34 run_atlas
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas       105 Jun  4 09:34 job.xml
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas 217632793 Jun  4 09:34 EVNT.45006593._002194.pool.root.1
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:34 start_atlas.sh
[2025-06-04 10:50:06] drwxrwx--x 2 boincer umatlas      4096 Jun  4 09:34 shared
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:34 input.tar.gz
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas         0 Jun  4 09:34 boinc_lockfile
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 09:34 pandaJob.out
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas    986819 Jun  4 09:35 agis_schedconf.cvmfs.json
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas   1598969 Jun  4 09:35 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:50:06] drwx------ 4 boincer umatlas      4096 Jun  4 09:35 pilot3
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 10:45 init_data.xml
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas       529 Jun  4 10:49 boinc_task_state.xml
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas 183936032 Jun  4 10:49 HITS.45006595._054846.pool.root.1
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas        95 Jun  4 10:49 pilot_heartbeat.json
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas      1039 Jun  4 10:49 memory_monitor_summary.json
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas    312585 Jun  4 10:49 log.45006595._054846.job.log.tgz.1
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas      7706 Jun  4 10:49 heartbeat.json
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 10:50 boinc_mmap_file
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas        27 Jun  4 10:50 wrapper_checkpoint.txt
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas      4663 Jun  4 10:50 pilotlog.txt
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas    442911 Jun  4 10:50 log.45006595._054846.job.log.1
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas       357 Jun  4 10:50 output.list
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas       620 Jun  4 10:50 runtime_log
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas    778240 Jun  4 10:50 result.tar.gz
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 10:50 runtime_log.err
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas       658 Jun  4 10:50 IRdKDmRjxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmacnKDmbGxkMo.diag
[2025-06-04 10:50:06] -rw-r--r-- 1 boincer umatlas     21876 Jun  4 10:50 stderr.txt
[2025-06-04 10:50:06] HITS file was successfully produced:
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas 183936032 Jun  4 10:49 shared/HITS.pool.root.1
[2025-06-04 10:50:06]  *** Contents of shared directory: ***
[2025-06-04 10:50:06] total 393444
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas 217632793 Jun  4 09:34 ATLAS.root_0
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 09:34 start_atlas.sh
[2025-06-04 10:50:06] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 09:34 input.tar.gz
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas 183936032 Jun  4 10:49 HITS.pool.root.1
[2025-06-04 10:50:06] -rw------- 1 boincer umatlas    778240 Jun  4 10:50 result.tar.gz
10:50:07 (91923): run_atlas exited; CPU time 30572.931584
10:50:07 (91923): called boinc_finish(0)

</stderr_txt>
]]>

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