Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:27:39 (4016321): wrapper (7.7.26015): starting
10:27:39 (4016321): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 10:27:39] Arguments: --nthreads 4
[2025-06-04 10:27:39] Threads: 4
[2025-06-04 10:27:39] Checking for CVMFS
[2025-06-04 10:27:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:27:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:27:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:27:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:27:39] 2.12.6.0 2389267 2746 53068 146786 1 59 4080823 6144001 5679 130560 0 14306522 99.998 701747 5008 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2025-06-04 10:27:39] CVMFS is ok
[2025-06-04 10:27:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:27:39] Checking for apptainer binary...
[2025-06-04 10:27:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:27:39] Running /usr/bin/apptainer --version
[2025-06-04 10:27:40] apptainer version 1.3.4
[2025-06-04 10:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:27:40] Starfish-Cruncher
[2025-06-04 10:27:40] apptainer works
[2025-06-04 10:27:40] Set ATHENA_PROC_NUMBER=4
[2025-06-04 10:27:40] Set ATHENA_CORE_NUMBER=4
[2025-06-04 10:27:40] Starting ATLAS job with PandaID=6668045424
[2025-06-04 10:27:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:52:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:52:21] 2025-06-04 17:52:02,421 | INFO     | executing command: lscpu
[2025-06-04 12:52:21] 2025-06-04 17:52:02,450 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:52:21] 2025-06-04 17:52:04,410 | INFO     | monitor loop #645: job 0:6668045424 is in state 'finished'
[2025-06-04 12:52:21] 2025-06-04 17:52:04,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:52:21] 2025-06-04 17:52:06,913 | INFO     | monitor loop #646: job 0:6668045424 is in state 'finished'
[2025-06-04 12:52:21] 2025-06-04 17:52:06,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,207 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:52:21] 2025-06-04 17:52:08,208 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6668045424/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,208 | INFO     | extracted standard info from prmon json
[2025-06-04 12:52:21] 2025-06-04 17:52:08,208 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:52:21] 2025-06-04 17:52:08,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:52:21] 2025-06-04 17:52:08,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:52:21] 2025-06-04 17:52:08,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:52:21] 2025-06-04 17:52:08,211 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:52:21] 2025-06-04 17:52:08,211 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | sum of deviations: -1100652371.4999993
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | mean x: 1749055191.5
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | mean y: 2331705.26056338
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | -- intersect: 2170693611.8504076
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | intersect: 2170693611.8504076
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | chi2: 1.4002595229313715
[2025-06-04 12:52:21] 2025-06-04 17:52:08,212 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | sum of deviations: -897247536.0000006
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | mean x: 1749055039.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | mean y: 2332047.99270073
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | -- intersect: 1970665912.655683
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | intersect: 1970665912.655683
[2025-06-04 12:52:21] 2025-06-04 17:52:08,213 | INFO     | chi2: 1.4006044334690873
[2025-06-04 12:52:21] 2025-06-04 17:52:08,214 | INFO     | current chi2=1.4006044334690873 (change=-0.02463190087747019 %)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,214 | INFO     | right removable region: 136
[2025-06-04 12:52:21] 2025-06-04 17:52:08,214 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,214 | INFO     | sum of deviations: -17070367673.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,214 | INFO     | mean x: 1749055344.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | mean y: 2358000.0802919706
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | -- intersect: 37450428107.91483
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | intersect: 37450428107.91483
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | chi2: 0.06496527334276851
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | current chi2=0.06496527334276851 (change=95.36048337619822 %)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,215 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | sum of deviations: -14679299372.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | mean x: 1749055496.5
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | mean y: 2353659.5
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | -- intersect: 36004933771.775246
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | intersect: 36004933771.775246
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | chi2: 0.06408993834201035
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | current chi2=0.06408993834201035 (change=1.3473890829947515 %)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | left removable region: 20
[2025-06-04 12:52:21] 2025-06-04 17:52:08,216 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | sum of deviations: -8763619900.000002
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | mean x: 1749055618.5
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | mean y: 2343562.293103448
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | -- intersect: 31673727237.650784
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | intersect: 31673727237.650784
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | chi2: 0.05393892948088503
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | -- intersect: 31673727237.650784
[2025-06-04 12:52:21] 2025-06-04 17:52:08,217 | INFO     | current memory leak: -18.11 B/s (using 116 data points, chi2=0.05)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | ..............................
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . Timing measurements:
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . get job = 0 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . initial setup = 2 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . payload setup = 4 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . stage-in = 0 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . payload execution = 8629 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . stage-out = 0 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | . log creation = 0 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,218 | INFO     | ..............................
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | 
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | job summary report
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | --------------------------------------------------
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | PanDA job id: 6668045424
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | task id: 44871837
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | errors: (none)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | pilot state: finished 
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | transexitcode: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | exeerrorcode: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | exeerrordiag: 
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | exitcode: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | exitmsg: OK
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | cpuconsumptiontime: 33435 s
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | nevents: 400
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | neventsw: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | pid: 4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | pgrp: 4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | corecount: 4
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | event service: False
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | sizes: {0: 2397121, 1: 2397376, 4: 2397582, 12: 2397610, 8637: 2425488, 8638: 2434627, 8645: 2434741}
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | --------------------------------------------------
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | 
[2025-06-04 12:52:21] 2025-06-04 17:52:08,290 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-06-04 12:52:21] 2025-06-04 17:52:08,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:52:21] 2025-06-04 17:52:08,308 | INFO     | job 6668045424 has completed (purged errors)
[2025-06-04 12:52:21] 2025-06-04 17:52:08,308 | INFO     | overall cleanup function is called
[2025-06-04 12:52:21] 2025-06-04 17:52:08,786 | INFO     | PID=4025863 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:52:21] 2025-06-04 17:52:08,786 | INFO     | .. there are 6 such processes running
[2025-06-04 12:52:21] 2025-06-04 17:52:09,315 | INFO     | --- collectZombieJob: --- 10, [4036737]
[2025-06-04 12:52:21] 2025-06-04 17:52:09,315 | INFO     | zombie collector waiting for pid 4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:09,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:52:21] 2025-06-04 17:52:09,315 | INFO     | collected zombie processes
[2025-06-04 12:52:21] 2025-06-04 17:52:09,315 | INFO     | will attempt to kill all subprocesses of pid=4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:09,461 | INFO     | process IDs to be killed: [4036737] (in reverse order)
[2025-06-04 12:52:21] 2025-06-04 17:52:09,515 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:52:21] 2025-06-04 17:52:09,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:52:21] 2025-06-04 17:52:09,517 | INFO     | did not find any defunct processes belonging to 4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:09,520 | INFO     | did not find any defunct processes belonging to 4036737
[2025-06-04 12:52:21] 2025-06-04 17:52:09,520 | INFO     | ready for new job
[2025-06-04 12:52:21] 2025-06-04 17:52:09,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:52:21] 2025-06-04 17:52:09,521 | INFO     | **************************************
[2025-06-04 12:52:21] 2025-06-04 17:52:09,521 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:52:21] 2025-06-04 17:52:09,521 | INFO     | **************************************
[2025-06-04 12:52:21] 2025-06-04 17:52:09,521 | INFO     | 
[2025-06-04 12:52:21] 2025-06-04 17:52:09,522 | INFO     | architecture information:
[2025-06-04 12:52:21] 2025-06-04 17:52:09,522 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:52:21] 2025-06-04 17:52:09,530 | INFO     | cat /etc/os-release:
[2025-06-04 12:52:21] NAME="CentOS Linux"
[2025-06-04 12:52:21] VERSION="7 (Core)"
[2025-06-04 12:52:21] ID="centos"
[2025-06-04 12:52:21] ID_LIKE="rhel fedora"
[2025-06-04 12:52:21] VERSION_ID="7"
[2025-06-04 12:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:52:21] ANSI_COLOR="0;31"
[2025-06-04 12:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:52:21] HOME_URL="https://www.centos.org/"
[2025-06-04 12:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:52:21] 
[2025-06-04 12:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:52:21] 
[2025-06-04 12:52:21] 2025-06-04 17:52:09,530 | INFO     | **************************************
[2025-06-04 12:52:21] 2025-06-04 17:52:10,033 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-06-04 12:52:21] 2025-06-04 17:52:10,047 | INFO     | sufficient remaining disk space (1816502730752 B)
[2025-06-04 12:52:21] 2025-06-04 17:52:10,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:52:21] 2025-06-04 17:52:10,047 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:52:21] 2025-06-04 17:52:10,047 | INFO     | update_server=False
[2025-06-04 12:52:21] 2025-06-04 17:52:10,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:52:21] 2025-06-04 17:52:10,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:52:21] 2025-06-04 17:52:10,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:52:21] 2025-06-04 17:52:10,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:52:21] 2025-06-04 17:52:10,422 | INFO     | aborting loop
[2025-06-04 12:52:21] 2025-06-04 17:52:10,791 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:52:21] 2025-06-04 17:52:10,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:52:21] 2025-06-04 17:52:10,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:52:21] 2025-06-04 17:52:11,041 | INFO     | all data control threads have been joined
[2025-06-04 12:52:21] 2025-06-04 17:52:11,052 | INFO     | all payload control threads have been joined
[2025-06-04 12:52:21] 2025-06-04 17:52:11,053 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,053 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,065 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,242 | INFO     | all job control threads have been joined
[2025-06-04 12:52:21] 2025-06-04 17:52:11,268 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,327 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,330 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,427 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,642 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:11,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:52:21] 2025-06-04 17:52:12,046 | INFO     | [data] control thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:12,053 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:12,058 | INFO     | [payload] control thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:12,248 | INFO     | [job] control thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:12,414 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:12,547 | INFO     | [job] validate thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:15,927 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:52:21] 2025-06-04 17:52:16,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134203638458176)>', '<ExcThread(monitor, started 134203245070080)>']
[2025-06-04 12:52:21] 2025-06-04 17:52:16,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:52:21] 2025-06-04 17:52:16,822 | INFO     | [monitor] control thread has ended
[2025-06-04 12:52:21] 2025-06-04 17:52:21,216 | INFO     | all workflow threads have been joined
[2025-06-04 12:52:21] 2025-06-04 17:52:21,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:52:21] 2025-06-04 17:52:21,217 | INFO     | traces error code: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:21,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:52:21] 2025-06-04 17:52:21,284 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:52:21] 2025-06-04 17:52:21,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:52:21] 2025-06-04 17:52:21,288 [wrapper] pilotpid: 4025863
[2025-06-04 12:52:21] 2025-06-04 17:52:21,290 [wrapper] Pilot exit status: 0
[2025-06-04 12:52:21] 2025-06-04 17:52:21,297 [wrapper] pandaids: 6668045424
[2025-06-04 12:52:21] 2025-06-04 17:52:21,332 [wrapper] cleanup supervisor_pilot   68136 4025864
[2025-06-04 12:52:21] 2025-06-04 17:52:21,334 [wrapper] Test setup, not cleaning
[2025-06-04 12:52:21] 2025-06-04 17:52:21,336 [wrapper] apfmon messages muted
[2025-06-04 12:52:21] 2025-06-04 17:52:21,337 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:52:21] 2025-06-04 17:52:21,339 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:52:21]  *** Error codes and diagnostics ***
[2025-06-04 12:52:21]     "exeErrorCode": 0,
[2025-06-04 12:52:21]     "exeErrorDiag": "",
[2025-06-04 12:52:21]     "pilotErrorCode": 0,
[2025-06-04 12:52:21]     "pilotErrorDiag": "",
[2025-06-04 12:52:21]  *** Listing of results directory ***
[2025-06-04 12:52:21] total 414852
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc    495897 May 27 23:31 pilot3.tar.gz
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc      5111 May 28 00:16 queuedata.json
[2025-06-04 12:52:21] -rwx------ 1 boinc boinc     37140 May 28 00:18 runpilot2-wrapper.sh
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc       100 Jun  4 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:52:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 10:27 run_atlas
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc       105 Jun  4 10:27 job.xml
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc 221959265 Jun  4 10:27 EVNT.44871834._003091.pool.root.1
[2025-06-04 12:52:21] drwxrwx--x 2 boinc boinc      4096 Jun  4 10:27 shared
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc    508878 Jun  4 10:27 input.tar.gz
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc      9628 Jun  4 10:27 init_data.xml
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:27 start_atlas.sh
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc         0 Jun  4 10:27 boinc_lockfile
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc      2558 Jun  4 10:27 pandaJob.out
[2025-06-04 12:52:21] -rw------- 1 boinc boinc    990989 Jun  4 10:27 agis_schedconf.cvmfs.json
[2025-06-04 12:52:21] -rw------- 1 boinc boinc   1598969 Jun  4 10:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:52:21] drwx------ 4 boinc boinc      4096 Jun  4 10:27 pilot3
[2025-06-04 12:52:21] -rw------- 1 boinc boinc 196811155 Jun  4 12:51 HITS.44871837._079081.pool.root.1
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:51 boinc_task_state.xml
[2025-06-04 12:52:21] -rw------- 1 boinc boinc        95 Jun  4 12:51 pilot_heartbeat.json
[2025-06-04 12:52:21] -rw------- 1 boinc boinc      1022 Jun  4 12:51 memory_monitor_summary.json
[2025-06-04 12:52:21] -rw------- 1 boinc boinc    272416 Jun  4 12:52 log.44871837._079081.job.log.tgz.1
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:52 boinc_mmap_file
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:52 wrapper_checkpoint.txt
[2025-06-04 12:52:21] -rw------- 1 boinc boinc      7670 Jun  4 12:52 heartbeat.json
[2025-06-04 12:52:21] -rw------- 1 boinc boinc      4362 Jun  4 12:52 pilotlog.txt
[2025-06-04 12:52:21] -rw------- 1 boinc boinc    826612 Jun  4 12:52 log.44871837._079081.job.log.1
[2025-06-04 12:52:21] -rw------- 1 boinc boinc       357 Jun  4 12:52 output.list
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:52 runtime_log
[2025-06-04 12:52:21] -rw------- 1 boinc boinc   1116160 Jun  4 12:52 result.tar.gz
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc      8761 Jun  4 12:52 runtime_log.err
[2025-06-04 12:52:21] -rw------- 1 boinc boinc       652 Jun  4 12:52 dtvLDmaMOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgxSKDmLSe0No.diag
[2025-06-04 12:52:21] -rw-r--r-- 1 boinc boinc     20907 Jun  4 12:52 stderr.txt
[2025-06-04 12:52:21] HITS file was successfully produced:
[2025-06-04 12:52:21] -rw------- 1 boinc boinc 196811155 Jun  4 12:51 shared/HITS.pool.root.1
[2025-06-04 12:52:21]  *** Contents of shared directory: ***
[2025-06-04 12:52:21] total 410576
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc 221959265 Jun  4 10:27 ATLAS.root_0
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc    508878 Jun  4 10:27 input.tar.gz
[2025-06-04 12:52:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 10:27 start_atlas.sh
[2025-06-04 12:52:21] -rw------- 1 boinc boinc 196811155 Jun  4 12:51 HITS.pool.root.1
[2025-06-04 12:52:21] -rw------- 1 boinc boinc   1116160 Jun  4 12:52 result.tar.gz
12:52:23 (4016321): run_atlas exited; CPU time 33559.470526
12:52:23 (4016321): called boinc_finish(0)

</stderr_txt>
]]>

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